RNA–Protein interactions for RNA: ENST00000473349.1

BRD3-205, Transcript of bromodomain containing 3, humanhuman

TSL 3

Gene BRD3, Length 761 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-205ENST00000473349 GPR25O00155 361 aa11.94□□□□□ -0.5
BRD3-205ENST00000473349 GJA5P36382 358 aa11.94□□□□□ -0.5
BRD3-205ENST00000473349 TCP10L2B9ZVM9 353 aa11.93□□□□□ -0.5
BRD3-205ENST00000473349 IGF2BP3O00425 579 aaKnown RBP eCLIP11.93□□□□□ -0.5
BRD3-205ENST00000473349 USP2O75604 605 aaPredicted RBP11.93□□□□□ -0.5
BRD3-205ENST00000473349 BCAMP50895 628 aa11.93□□□□□ -0.5
BRD3-205ENST00000473349 CACNB3P54284 484 aa11.93□□□□□ -0.5
BRD3-205ENST00000473349 UBE4AQ14139 1066 aa11.93□□□□□ -0.5
BRD3-205ENST00000473349 RABL6Q3YEC7 729 aaPredicted RBP11.93□□□□□ -0.5
BRD3-205ENST00000473349 METTL24Q5JXM2 366 aa11.93□□□□□ -0.5
BRD3-205ENST00000473349 VGLL2Q8N8G2 317 aa11.93□□□□□ -0.5
BRD3-205ENST00000473349 SLC10A4Q96EP9 437 aa11.93□□□□□ -0.5
BRD3-205ENST00000473349 WNK4Q96J92 1243 aa11.93□□□□□ -0.5
BRD3-205ENST00000473349 USP44Q9H0E7 712 aa11.93□□□□□ -0.5
BRD3-205ENST00000473349 ZNF70Q9UC06 446 aaPredicted RBP11.93□□□□□ -0.5
BRD3-205ENST00000473349 HPS5Q9UPZ3 1129 aa11.93□□□□□ -0.5
BRD3-205ENST00000473349 HTTP42858 3142 aa11.93□□□□□ -0.5
BRD3-205ENST00000473349 ECM29Q5VYK3 1845 aa11.93□□□□□ -0.5
BRD3-205ENST00000473349 CRKP46108 304 aa11.92□□□□□ -0.5
BRD3-205ENST00000473349 FKBP1AP62942 108 aaKnown RBP11.92□□□□□ -0.5
BRD3-205ENST00000473349 SLFN5Q08AF3 891 aa11.92□□□□□ -0.5
BRD3-205ENST00000473349 FBXO33Q7Z6M2 555 aa11.92□□□□□ -0.5
BRD3-205ENST00000473349 DZIP1LQ8IYY4 767 aaKnown RBP11.92□□□□□ -0.5
BRD3-205ENST00000473349 TMEM39BQ9GZU3 492 aa11.92□□□□□ -0.5
BRD3-205ENST00000473349 MROH5Q6ZUA9 1318 aa11.91□□□□□ -0.5
BRD3-205ENST00000473349 COL1A1P02452 1464 aaPredicted RBP11.91□□□□□ -0.5
BRD3-205ENST00000473349 MYO1BO43795 1136 aa11.91□□□□□ -0.5
BRD3-205ENST00000473349 CAP1Q01518 475 aa11.91□□□□□ -0.5
BRD3-205ENST00000473349 MAP3K11Q16584 847 aa11.91□□□□□ -0.5
BRD3-205ENST00000473349 TEPSINQ96N21 525 aa11.91□□□□□ -0.5
BRD3-205ENST00000473349 ELP3Q9H9T3 547 aa11.91□□□□□ -0.5
BRD3-205ENST00000473349 OTOFQ9HC10 1997 aa11.9□□□□□ -0.5
BRD3-205ENST00000473349 E9PSI1 815 aa11.9□□□□□ -0.5
BRD3-205ENST00000473349 PPP1R12BO60237 982 aaPredicted RBP11.9□□□□□ -0.5
BRD3-205ENST00000473349 RFX5P48382 616 aaPredicted RBP11.9□□□□□ -0.5
BRD3-205ENST00000473349 SREBF2Q12772 1141 aa11.9□□□□□ -0.5
BRD3-205ENST00000473349 VPS37DQ86XT2 251 aa11.9□□□□□ -0.5
BRD3-205ENST00000473349 IFNL1Q8IU54 200 aa11.9□□□□□ -0.5
BRD3-205ENST00000473349 ARAP2Q8WZ64 1704 aa11.9□□□□□ -0.5
BRD3-205ENST00000473349 PTPN18Q99952 460 aa11.9□□□□□ -0.5
BRD3-205ENST00000473349 PPP2R3BQ9Y5P8 575 aa11.9□□□□□ -0.5
BRD3-205ENST00000473349 PTPRCP08575 1304 aa11.89□□□□□ -0.51
BRD3-205ENST00000473349 CENPFP49454 3210 aa11.89□□□□□ -0.51
BRD3-205ENST00000473349 FKTNO75072 461 aa11.89□□□□□ -0.51
BRD3-205ENST00000473349 FRAT2O75474 233 aaPredicted RBP11.89□□□□□ -0.51
BRD3-205ENST00000473349 PDE8BO95263 885 aa11.89□□□□□ -0.51
BRD3-205ENST00000473349 SUPT20HL1Q3ZLR7 823 aa11.89□□□□□ -0.51
BRD3-205ENST00000473349 SIL1Q9H173 461 aa11.89□□□□□ -0.51
BRD3-205ENST00000473349 SMC4Q9NTJ3 1288 aa11.89□□□□□ -0.51
BRD3-205ENST00000473349 SERPINA10Q9UK55 444 aa11.89□□□□□ -0.51
BRD3-205ENST00000473349 MANSC4A6NHS7 340 aaPredicted RBP11.88□□□□□ -0.51
BRD3-205ENST00000473349 FGFR2P21802 821 aa11.88□□□□□ -0.51
BRD3-205ENST00000473349 IREB2P48200 963 aaKnown RBP11.88□□□□□ -0.51
BRD3-205ENST00000473349 CRHR2Q13324 411 aa11.88□□□□□ -0.51
BRD3-205ENST00000473349 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.88□□□□□ -0.51
BRD3-205ENST00000473349 ATG9AQ7Z3C6 839 aa11.88□□□□□ -0.51
BRD3-205ENST00000473349 OPTNQ96CV9 577 aa11.88□□□□□ -0.51
BRD3-205ENST00000473349 UNCXA6NJT0 531 aa11.87□□□□□ -0.51
BRD3-205ENST00000473349 ZBTB48P10074 688 aaPredicted RBP11.87□□□□□ -0.51
BRD3-205ENST00000473349 MNX1P50219 401 aaPredicted RBP11.87□□□□□ -0.51
BRD3-205ENST00000473349 VGLL4Q14135 290 aa11.87□□□□□ -0.51
BRD3-205ENST00000473349 CAVIN4Q5BKX8 364 aa11.87□□□□□ -0.51
BRD3-205ENST00000473349 NOB1Q9ULX3 412 aaKnown RBP11.87□□□□□ -0.51
BRD3-205ENST00000473349 PA2G4Q9UQ80 394 aaKnown RBP11.87□□□□□ -0.51
BRD3-205ENST00000473349 EYA2O00167 538 aa11.86□□□□□ -0.51
BRD3-205ENST00000473349 GABBR2O75899 941 aa11.86□□□□□ -0.51
BRD3-205ENST00000473349 PUM3Q15397 648 aaKnown RBP11.86□□□□□ -0.51
BRD3-205ENST00000473349 APOBEC3HQ6NTF7 200 aaKnown RBP11.86□□□□□ -0.51
BRD3-205ENST00000473349 FBXO46Q6PJ61 603 aaPredicted RBP11.86□□□□□ -0.51
BRD3-205ENST00000473349 ANKRD13AQ8IZ07 590 aa11.86□□□□□ -0.51
BRD3-205ENST00000473349 CD99L2Q8TCZ2 262 aa11.86□□□□□ -0.51
BRD3-205ENST00000473349 OTUD5Q96G74 571 aa11.86□□□□□ -0.51
BRD3-205ENST00000473349 MS4A4AQ96JQ5 239 aa11.86□□□□□ -0.51
BRD3-205ENST00000473349 CFHR5Q9BXR6 569 aa11.86□□□□□ -0.51
BRD3-205ENST00000473349 TRIM17Q9Y577 477 aa11.86□□□□□ -0.51
BRD3-205ENST00000473349 PDE4DIPQ5VU43 2346 aa11.86□□□□□ -0.51
BRD3-205ENST00000473349 BRCA2P51587 3418 aa11.85□□□□□ -0.51
BRD3-205ENST00000473349 ECM2O94769 699 aaPredicted RBP11.85□□□□□ -0.51
BRD3-205ENST00000473349 IFIT1P09914 478 aaKnown RBP11.85□□□□□ -0.51
BRD3-205ENST00000473349 INHBEP58166 350 aa11.85□□□□□ -0.51
BRD3-205ENST00000473349 TNFAIP1Q13829 316 aa11.85□□□□□ -0.51
BRD3-205ENST00000473349 DIXDC1Q155Q3 683 aa11.85□□□□□ -0.51
BRD3-205ENST00000473349 PKN2Q16513 984 aaKnown RBP11.85□□□□□ -0.51
BRD3-205ENST00000473349 NOM1Q5C9Z4 860 aaKnown RBP11.85□□□□□ -0.51
BRD3-205ENST00000473349 OTOP1Q7RTM1 612 aa11.85□□□□□ -0.51
BRD3-205ENST00000473349 TRMT2AQ8IZ69 625 aaKnown RBP11.85□□□□□ -0.51
BRD3-205ENST00000473349 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.85□□□□□ -0.51
BRD3-205ENST00000473349 BRI3BPQ8WY22 251 aa11.85□□□□□ -0.51
BRD3-205ENST00000473349 ZKSCAN4Q969J2 545 aaPredicted RBP11.85□□□□□ -0.51
BRD3-205ENST00000473349 TEKT1Q969V4 418 aa11.85□□□□□ -0.51
BRD3-205ENST00000473349 TNNQ9UQP3 1299 aa11.85□□□□□ -0.51
BRD3-205ENST00000473349 LRRFIP2Q9Y608 721 aaKnown RBP11.85□□□□□ -0.51
BRD3-205ENST00000473349 MKI67P46013 3256 aaKnown RBP11.85□□□□□ -0.51
BRD3-205ENST00000473349 ALDH1A1P00352 501 aa11.84□□□□□ -0.51
BRD3-205ENST00000473349 UBTFL1P0CB47 393 aaPredicted RBP11.84□□□□□ -0.51
BRD3-205ENST00000473349 PRDX5P30044 214 aa11.84□□□□□ -0.51
BRD3-205ENST00000473349 ADORA1P30542 326 aa11.84□□□□□ -0.51
BRD3-205ENST00000473349 MAP3K9P80192 1104 aa11.84□□□□□ -0.51
BRD3-205ENST00000473349 ALDH1L2Q3SY69 923 aa11.84□□□□□ -0.51
BRD3-205ENST00000473349 MIGA2Q7L4E1 593 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms