RNA–Protein interactions for RNA: ENST00000473062.1

CLCC1-208, Transcript of chloride channel CLIC like 1, humanhuman

TSL 3

Gene CLCC1, Length 319 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-208ENST00000473062 SH2B1Q9NRF2 756 aaPredicted RBP5.6□□□□□ -1.51
CLCC1-208ENST00000473062 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.6□□□□□ -1.51
CLCC1-208ENST00000473062 HOXB4P17483 251 aaPredicted RBP5.59□□□□□ -1.51
CLCC1-208ENST00000473062 NME2P22392 152 aa5.59□□□□□ -1.51
CLCC1-208ENST00000473062 TAGLNQ01995 201 aaKnown RBP5.59□□□□□ -1.51
CLCC1-208ENST00000473062 SETDB1Q15047 1291 aa5.59□□□□□ -1.51
CLCC1-208ENST00000473062 NECAB3Q96P71 396 aaPredicted RBP5.59□□□□□ -1.51
CLCC1-208ENST00000473062 PSMG3-AS1Q96PY0 264 aa5.59□□□□□ -1.51
CLCC1-208ENST00000473062 KRT82Q9NSB4 513 aa5.59□□□□□ -1.51
CLCC1-208ENST00000473062 CYP8B1Q9UNU6 501 aa5.59□□□□□ -1.51
CLCC1-208ENST00000473062 DLL1O00548 723 aa5.58□□□□□ -1.52
CLCC1-208ENST00000473062 CDC25BP30305 580 aa5.58□□□□□ -1.52
CLCC1-208ENST00000473062 COL9A3Q14050 684 aaPredicted RBP5.58□□□□□ -1.52
CLCC1-208ENST00000473062 POU4F3Q15319 338 aa5.58□□□□□ -1.52
CLCC1-208ENST00000473062 DUOXA2Q1HG44 320 aa5.58□□□□□ -1.52
CLCC1-208ENST00000473062 TPTE2Q6XPS3 522 aa5.58□□□□□ -1.52
CLCC1-208ENST00000473062 RELL1Q8IUW5 271 aa5.58□□□□□ -1.52
CLCC1-208ENST00000473062 SULF2Q8IWU5 870 aa5.58□□□□□ -1.52
CLCC1-208ENST00000473062 RNF34Q969K3 372 aa5.58□□□□□ -1.52
CLCC1-208ENST00000473062 CEP41Q9BYV8 373 aa5.58□□□□□ -1.52
CLCC1-208ENST00000473062 CNTNAP5Q8WYK1 1306 aa5.57□□□□□ -1.52
CLCC1-208ENST00000473062 SYNGAP1Q96PV0 1343 aa5.57□□□□□ -1.52
CLCC1-208ENST00000473062 SOX1O00570 391 aaPredicted RBP5.57□□□□□ -1.52
CLCC1-208ENST00000473062 TCF3P15923 654 aa5.57□□□□□ -1.52
CLCC1-208ENST00000473062 LORP23490 312 aaPredicted RBP5.57□□□□□ -1.52
CLCC1-208ENST00000473062 ARNTP27540 789 aa5.57□□□□□ -1.52
CLCC1-208ENST00000473062 LLGL2Q6P1M3 1020 aa5.57□□□□□ -1.52
CLCC1-208ENST00000473062 TXNDC11Q6PKC3 985 aa5.57□□□□□ -1.52
CLCC1-208ENST00000473062 LENG1Q96BZ8 264 aaPredicted RBP5.57□□□□□ -1.52
CLCC1-208ENST00000473062 CARD10Q9BWT7 1032 aa5.57□□□□□ -1.52
CLCC1-208ENST00000473062 USP26Q9BXU7 913 aa5.57□□□□□ -1.52
CLCC1-208ENST00000473062 BACH2Q9BYV9 841 aa5.57□□□□□ -1.52
CLCC1-208ENST00000473062 RNF208Q9H0X6 261 aa5.57□□□□□ -1.52
CLCC1-208ENST00000473062 USP21Q9UK80 565 aa5.57□□□□□ -1.52
CLCC1-208ENST00000473062 RECKO95980 971 aa5.56□□□□□ -1.52
CLCC1-208ENST00000473062 CTSHP09668 335 aa5.56□□□□□ -1.52
CLCC1-208ENST00000473062 SLFN14P0C7P3 912 aa5.56□□□□□ -1.52
CLCC1-208ENST00000473062 ZNF423Q2M1K9 1284 aa5.56□□□□□ -1.52
CLCC1-208ENST00000473062 ANKRD34AQ69YU3 496 aa5.56□□□□□ -1.52
CLCC1-208ENST00000473062 TTBK2Q6IQ55 1244 aa5.56□□□□□ -1.52
CLCC1-208ENST00000473062 ILDR2Q71H61 639 aa5.56□□□□□ -1.52
CLCC1-208ENST00000473062 CCDC84Q86UT8 332 aaPredicted RBP5.56□□□□□ -1.52
CLCC1-208ENST00000473062 RSRP1Q9BUV0 290 aa5.56□□□□□ -1.52
CLCC1-208ENST00000473062 CBX8Q9HC52 389 aa5.56□□□□□ -1.52
CLCC1-208ENST00000473062 CYP4F12Q9HCS2 524 aa5.56□□□□□ -1.52
CLCC1-208ENST00000473062 GGT7Q9UJ14 662 aa5.56□□□□□ -1.52
CLCC1-208ENST00000473062 ENC1O14682 589 aa5.55□□□□□ -1.52
CLCC1-208ENST00000473062 DEAF1O75398 565 aaPredicted RBP5.55□□□□□ -1.52
CLCC1-208ENST00000473062 TRIM37O94972 964 aa5.55□□□□□ -1.52
CLCC1-208ENST00000473062 GSTP1P09211 210 aaKnown RBP5.55□□□□□ -1.52
CLCC1-208ENST00000473062 NLRP12P59046 1061 aa5.55□□□□□ -1.52
CLCC1-208ENST00000473062 PDE3AQ14432 1141 aa5.55□□□□□ -1.52
CLCC1-208ENST00000473062 MEI1Q5TIA1 1274 aa5.55□□□□□ -1.52
CLCC1-208ENST00000473062 PCNX4Q63HM2 1172 aa5.55□□□□□ -1.52
CLCC1-208ENST00000473062 FDX2Q6P4F2 183 aa5.55□□□□□ -1.52
CLCC1-208ENST00000473062 ACAD11Q709F0 780 aa5.55□□□□□ -1.52
CLCC1-208ENST00000473062 TMEM130Q8N3G9 435 aa5.55□□□□□ -1.52
CLCC1-208ENST00000473062 KLHDC7BQ96G42 594 aa5.55□□□□□ -1.52
CLCC1-208ENST00000473062 ACSBG1Q96GR2 724 aa5.55□□□□□ -1.52
CLCC1-208ENST00000473062 SPATA32Q96LK8 384 aa5.55□□□□□ -1.52
CLCC1-208ENST00000473062 RUSC1Q9BVN2 902 aa5.55□□□□□ -1.52
CLCC1-208ENST00000473062 KRTAP9-9Q9BYP9 154 aa5.55□□□□□ -1.52
CLCC1-208ENST00000473062 KRTAP9-4Q9BYQ2 154 aa5.55□□□□□ -1.52
CLCC1-208ENST00000473062 MIR1-1HGQ9H1L0 117 aa5.55□□□□□ -1.52
CLCC1-208ENST00000473062 RAD18Q9NS91 495 aa5.55□□□□□ -1.52
CLCC1-208ENST00000473062 KIAA1522Q9P206 1035 aaPredicted RBP5.55□□□□□ -1.52
CLCC1-208ENST00000473062 MEGF11A6BM72 1044 aa5.54□□□□□ -1.52
CLCC1-208ENST00000473062 UNCXA6NJT0 531 aa5.54□□□□□ -1.52
CLCC1-208ENST00000473062 FBXO24O75426 580 aa5.54□□□□□ -1.52
CLCC1-208ENST00000473062 MAOBP27338 520 aa5.54□□□□□ -1.52
CLCC1-208ENST00000473062 LIG3P49916 1009 aa5.54□□□□□ -1.52
CLCC1-208ENST00000473062 FAAP100Q0VG06 881 aa5.54□□□□□ -1.52
CLCC1-208ENST00000473062 KCNMA1Q12791 1236 aa5.54□□□□□ -1.52
CLCC1-208ENST00000473062 GNL2Q13823 731 aaKnown RBP5.54□□□□□ -1.52
CLCC1-208ENST00000473062 UVSSAQ2YD98 709 aa5.54□□□□□ -1.52
CLCC1-208ENST00000473062 EXOSC6Q5RKV6 272 aaKnown RBP5.54□□□□□ -1.52
CLCC1-208ENST00000473062 NUTM2GQ5VZR2 741 aa5.54□□□□□ -1.52
CLCC1-208ENST00000473062 YIPF2Q9BWQ6 316 aa5.54□□□□□ -1.52
CLCC1-208ENST00000473062 AKTIPQ9H8T0 292 aa5.54□□□□□ -1.52
CLCC1-208ENST00000473062 LOC100289279A0A1B0GTE1 492 aa5.53□□□□□ -1.52
CLCC1-208ENST00000473062 SART1O43290 800 aaKnown RBP5.53□□□□□ -1.52
CLCC1-208ENST00000473062 BPNT1O95861 308 aa5.53□□□□□ -1.52
CLCC1-208ENST00000473062 GBP2P32456 591 aaPredicted RBP5.53□□□□□ -1.52
CLCC1-208ENST00000473062 FANCCQ00597 558 aa5.53□□□□□ -1.52
CLCC1-208ENST00000473062 AGMOQ6ZNB7 445 aa5.53□□□□□ -1.52
CLCC1-208ENST00000473062 ERMP1Q7Z2K6 904 aa5.53□□□□□ -1.52
CLCC1-208ENST00000473062 ZNF654Q8IZM8 581 aa5.53□□□□□ -1.52
CLCC1-208ENST00000473062 GALNT11Q8NCW6 608 aa5.53□□□□□ -1.52
CLCC1-208ENST00000473062 KCNB2Q92953 911 aa5.53□□□□□ -1.52
CLCC1-208ENST00000473062 TMEM74Q96NL1 305 aa5.53□□□□□ -1.52
CLCC1-208ENST00000473062 CCSER2Q9H7U1 834 aa5.53□□□□□ -1.52
CLCC1-208ENST00000473062 SUGCTQ9HAC7 445 aa5.53□□□□□ -1.52
CLCC1-208ENST00000473062 RNF19AQ9NV58 838 aa5.53□□□□□ -1.52
CLCC1-208ENST00000473062 FAM229AH3BQW9 127 aa5.52□□□□□ -1.53
CLCC1-208ENST00000473062 CELA3AP09093 270 aa5.52□□□□□ -1.53
CLCC1-208ENST00000473062 ZNF157P51786 506 aaPredicted RBP5.52□□□□□ -1.53
CLCC1-208ENST00000473062 LMNB2Q03252 620 aa5.52□□□□□ -1.53
CLCC1-208ENST00000473062 FOXD4L6Q3SYB3 417 aaPredicted RBP5.52□□□□□ -1.53
CLCC1-208ENST00000473062 FOXD4L3Q6VB84 417 aaPredicted RBP5.52□□□□□ -1.53
CLCC1-208ENST00000473062 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms