RNA–Protein interactions for RNA: ENST00000472988.5

SMARCD3-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 1,654 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-209ENST00000472988 LAMA4Q16363 1823 aa23.04■■□□□ 1.28
SMARCD3-209ENST00000472988 SPTY2D1Q68D10 685 aaPredicted RBP23.03■■□□□ 1.28
SMARCD3-209ENST00000472988 PODNQ7Z5L7 613 aa23.03■■□□□ 1.28
SMARCD3-209ENST00000472988 CDK5RAP2Q96SN8 1893 aa23.03■■□□□ 1.28
SMARCD3-209ENST00000472988 NFKBIEO00221 500 aa23.03■■□□□ 1.28
SMARCD3-209ENST00000472988 GPAA1O43292 621 aa23.03■■□□□ 1.28
SMARCD3-209ENST00000472988 CYP7A1P22680 504 aa23.03■■□□□ 1.28
SMARCD3-209ENST00000472988 MFSD14BQ5SR56 506 aa23.03■■□□□ 1.28
SMARCD3-209ENST00000472988 VPS53Q5VIR6 699 aa23.03■■□□□ 1.28
SMARCD3-209ENST00000472988 NAA16Q6N069 864 aaPredicted RBP23.03■■□□□ 1.28
SMARCD3-209ENST00000472988 TBC1D22AQ8WUA7 517 aa23.03■■□□□ 1.28
SMARCD3-209ENST00000472988 LDHBP07195 334 aaKnown RBP23.02■■□□□ 1.28
SMARCD3-209ENST00000472988 MAP4K1Q92918 833 aa23.02■■□□□ 1.28
SMARCD3-209ENST00000472988 FBXW7Q969H0 707 aa23.02■■□□□ 1.28
SMARCD3-209ENST00000472988 KIF2CQ99661 725 aa23.02■■□□□ 1.28
SMARCD3-209ENST00000472988 TAOK3Q9H2K8 898 aa23.02■■□□□ 1.28
SMARCD3-209ENST00000472988 KCNQ5Q9NR82 932 aa23.02■■□□□ 1.28
SMARCD3-209ENST00000472988 HSPA4P34932 840 aa23.01■■□□□ 1.27
SMARCD3-209ENST00000472988 DZIP1Q86YF9 867 aaKnown RBP23.01■■□□□ 1.27
SMARCD3-209ENST00000472988 YDJCA8MPS7 323 aa23■■□□□ 1.27
SMARCD3-209ENST00000472988 FOXP2O15409 715 aa23■■□□□ 1.27
SMARCD3-209ENST00000472988 TTLL5Q6EMB2 1281 aa23■■□□□ 1.27
SMARCD3-209ENST00000472988 CERS5Q8N5B7 392 aa23■■□□□ 1.27
SMARCD3-209ENST00000472988 SYT17Q9BSW7 474 aa23■■□□□ 1.27
SMARCD3-209ENST00000472988 VPS33BQ9H267 617 aa23■■□□□ 1.27
SMARCD3-209ENST00000472988 PALD1Q9ULE6 856 aa23■■□□□ 1.27
SMARCD3-209ENST00000472988 RBM8AQ9Y5S9 174 aaKnown RBP23■■□□□ 1.27
SMARCD3-209ENST00000472988 DICER1Q9UPY3 1922 aaKnown RBP23■■□□□ 1.27
SMARCD3-209ENST00000472988 IGSF3O75054 1194 aa23■■□□□ 1.27
SMARCD3-209ENST00000472988 MBD4O95243 580 aa23■■□□□ 1.27
SMARCD3-209ENST00000472988 HSPD1P10809 573 aaKnown RBP23■■□□□ 1.27
SMARCD3-209ENST00000472988 IARSP41252 1262 aaKnown RBP23■■□□□ 1.27
SMARCD3-209ENST00000472988 LARGE2Q8N3Y3 721 aa23■■□□□ 1.27
SMARCD3-209ENST00000472988 MXD3Q9BW11 206 aa23■■□□□ 1.27
SMARCD3-209ENST00000472988 SBF1O95248 1867 aa22.99■■□□□ 1.27
SMARCD3-209ENST00000472988 MCCP23508 829 aa22.99■■□□□ 1.27
SMARCD3-209ENST00000472988 MIGA1Q8NAN2 632 aa22.99■■□□□ 1.27
SMARCD3-209ENST00000472988 AIDAQ96BJ3 306 aa22.99■■□□□ 1.27
SMARCD3-209ENST00000472988 DSCC1Q9BVC3 393 aa22.99■■□□□ 1.27
SMARCD3-209ENST00000472988 BAZ2AQ9UIF9 1905 aaKnown RBP22.99■■□□□ 1.27
SMARCD3-209ENST00000472988 LTBP3Q9NS15 1303 aa22.98■■□□□ 1.27
SMARCD3-209ENST00000472988 TMED8Q6PL24 325 aaPredicted RBP22.98■■□□□ 1.27
SMARCD3-209ENST00000472988 LCORLQ8N3X6 602 aa22.98■■□□□ 1.27
SMARCD3-209ENST00000472988 STRBPQ96SI9 672 aaKnown RBP22.98■■□□□ 1.27
SMARCD3-209ENST00000472988 ARMT1Q9H993 441 aa22.98■■□□□ 1.27
SMARCD3-209ENST00000472988 FOCADQ5VW36 1801 aa22.97■■□□□ 1.27
SMARCD3-209ENST00000472988 SOCS7O14512 581 aa22.97■■□□□ 1.27
SMARCD3-209ENST00000472988 RASSF7Q02833 373 aa22.97■■□□□ 1.27
SMARCD3-209ENST00000472988 NECTIN1Q15223 517 aa22.97■■□□□ 1.27
SMARCD3-209ENST00000472988 DACT2Q5SW24 774 aa22.97■■□□□ 1.27
SMARCD3-209ENST00000472988 STRIP1Q5VSL9 837 aa22.97■■□□□ 1.27
SMARCD3-209ENST00000472988 RIOK1Q9BRS2 568 aaKnown RBP22.97■■□□□ 1.27
SMARCD3-209ENST00000472988 ECM29Q5VYK3 1845 aa22.97■■□□□ 1.27
SMARCD3-209ENST00000472988 DIXDC1Q155Q3 683 aa22.97■■□□□ 1.27
SMARCD3-209ENST00000472988 MAGEB6P1A0A0J9YX57 407 aa22.96■■□□□ 1.27
SMARCD3-209ENST00000472988 USP17L3A6NCW0 530 aa22.96■■□□□ 1.27
SMARCD3-209ENST00000472988 USP17L4A6NCW7 530 aa22.96■■□□□ 1.27
SMARCD3-209ENST00000472988 ANP32AP39687 249 aaKnown RBP22.96■■□□□ 1.27
SMARCD3-209ENST00000472988 USP17L1Q7RTZ2 530 aa22.96■■□□□ 1.27
SMARCD3-209ENST00000472988 NAV1Q8NEY1 1877 aa22.96■■□□□ 1.27
SMARCD3-209ENST00000472988 LAMB1P07942 1786 aa22.95■■□□□ 1.27
SMARCD3-209ENST00000472988 SUGT1Q9Y2Z0 365 aa22.95■■□□□ 1.26
SMARCD3-209ENST00000472988 U3KPZ7 1027 aaPredicted RBP22.95■■□□□ 1.26
SMARCD3-209ENST00000472988 ANAPC15P60006 121 aa22.94■■□□□ 1.26
SMARCD3-209ENST00000472988 FKBP1AP62942 108 aaKnown RBP22.94■■□□□ 1.26
SMARCD3-209ENST00000472988 DYNLL1P63167 89 aaKnown RBP22.94■■□□□ 1.26
SMARCD3-209ENST00000472988 GSTO1P78417 241 aa22.94■■□□□ 1.26
SMARCD3-209ENST00000472988 CREB3L3Q68CJ9 461 aa22.94■■□□□ 1.26
SMARCD3-209ENST00000472988 NIM1KQ8IY84 436 aa22.94■■□□□ 1.26
SMARCD3-209ENST00000472988 RASEFQ8IZ41 740 aa22.94■■□□□ 1.26
SMARCD3-209ENST00000472988 KCNB2Q92953 911 aa22.94■■□□□ 1.26
SMARCD3-209ENST00000472988 IL17RAQ96F46 866 aa22.94■■□□□ 1.26
SMARCD3-209ENST00000472988 MROH7-TTC4A0A0A0MT08 1334 aa22.94■■□□□ 1.26
SMARCD3-209ENST00000472988 SLC27A2O14975 620 aa22.93■■□□□ 1.26
SMARCD3-209ENST00000472988 PRELPP51888 382 aa22.93■■□□□ 1.26
SMARCD3-209ENST00000472988 AATFQ9NY61 560 aaKnown RBP eCLIP22.93■■□□□ 1.26
SMARCD3-209ENST00000472988 SNX14Q9Y5W7 946 aa22.93■■□□□ 1.26
SMARCD3-209ENST00000472988 F8W031 263 aaPredicted RBP22.93■■□□□ 1.26
SMARCD3-209ENST00000472988 PRKAB2O43741 272 aa22.93■■□□□ 1.26
SMARCD3-209ENST00000472988 EPB41L4AQ9HCS5 686 aaPredicted RBP22.92■■□□□ 1.26
SMARCD3-209ENST00000472988 ZNRF3Q9ULT6 936 aa22.92■■□□□ 1.26
SMARCD3-209ENST00000472988 TTF2Q9UNY4 1162 aaKnown RBP22.92■■□□□ 1.26
SMARCD3-209ENST00000472988 TAF6LQ9Y6J9 622 aa22.92■■□□□ 1.26
SMARCD3-209ENST00000472988 GAKO14976 1311 aa22.92■■□□□ 1.26
SMARCD3-209ENST00000472988 DDX60LQ5H9U9 1706 aaKnown RBP22.92■■□□□ 1.26
SMARCD3-209ENST00000472988 TIAM2Q8IVF5 1701 aa22.92■■□□□ 1.26
SMARCD3-209ENST00000472988 SLC4A4Q9Y6R1 1079 aa22.91■■□□□ 1.26
SMARCD3-209ENST00000472988 GSG1L2A8MUP6 293 aa22.9■■□□□ 1.26
SMARCD3-209ENST00000472988 RAD17O75943 681 aa22.9■■□□□ 1.26
SMARCD3-209ENST00000472988 FGAP02671 866 aa22.9■■□□□ 1.26
SMARCD3-209ENST00000472988 LDHCP07864 332 aa22.9■■□□□ 1.26
SMARCD3-209ENST00000472988 CYP21A2P08686 494 aa22.9■■□□□ 1.26
SMARCD3-209ENST00000472988 GNAT2P19087 354 aa22.9■■□□□ 1.26
SMARCD3-209ENST00000472988 PATL2C9JE40 543 aaKnown RBP22.9■■□□□ 1.26
SMARCD3-209ENST00000472988 RNF20Q5VTR2 975 aa22.9■■□□□ 1.26
SMARCD3-209ENST00000472988 KIAA0825Q8IV33 1275 aa22.9■■□□□ 1.26
SMARCD3-209ENST00000472988 FAM163AQ96GL9 167 aaPredicted RBP22.9■■□□□ 1.26
SMARCD3-209ENST00000472988 ZMYM6O95789 1325 aa22.89■■□□□ 1.25
SMARCD3-209ENST00000472988 APPP05067 770 aa22.89■■□□□ 1.25
SMARCD3-209ENST00000472988 YBX3P16989 372 aaKnown RBP eCLIP22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms