RNA–Protein interactions for RNA: ENST00000472789.1

SMARCD3-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 863 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-208ENST00000472789 ABCF2Q9UG63 623 aa12.87□□□□□ -0.35
SMARCD3-208ENST00000472789 ARAP2Q8WZ64 1704 aa12.87□□□□□ -0.35
SMARCD3-208ENST00000472789 COL1A1P02452 1464 aaPredicted RBP12.86□□□□□ -0.35
SMARCD3-208ENST00000472789 CNTNAP1P78357 1384 aa12.86□□□□□ -0.35
SMARCD3-208ENST00000472789 LDHBP07195 334 aaKnown RBP12.86□□□□□ -0.35
SMARCD3-208ENST00000472789 ARID4AP29374 1257 aaPredicted RBP12.86□□□□□ -0.35
SMARCD3-208ENST00000472789 HIRAP54198 1017 aaPredicted RBP12.86□□□□□ -0.35
SMARCD3-208ENST00000472789 SCARF1Q14162 830 aa12.86□□□□□ -0.35
SMARCD3-208ENST00000472789 GRIK5Q16478 980 aa12.86□□□□□ -0.35
SMARCD3-208ENST00000472789 GPATCH3Q96I76 525 aa12.86□□□□□ -0.35
SMARCD3-208ENST00000472789 HMG20BQ9P0W2 317 aa12.86□□□□□ -0.35
SMARCD3-208ENST00000472789 PASKQ96RG2 1323 aa12.86□□□□□ -0.35
SMARCD3-208ENST00000472789 MCAMP43121 646 aa12.85□□□□□ -0.35
SMARCD3-208ENST00000472789 CFAP100Q494V2 611 aa12.85□□□□□ -0.35
SMARCD3-208ENST00000472789 SPTY2D1Q68D10 685 aaPredicted RBP12.85□□□□□ -0.35
SMARCD3-208ENST00000472789 DZIP1Q86YF9 867 aaKnown RBP12.85□□□□□ -0.35
SMARCD3-208ENST00000472789 ZGPATQ8N5A5 531 aaKnown RBP12.85□□□□□ -0.35
SMARCD3-208ENST00000472789 DCPSQ96C86 337 aaKnown RBP12.85□□□□□ -0.35
SMARCD3-208ENST00000472789 GGA3Q9NZ52 723 aa12.85□□□□□ -0.35
SMARCD3-208ENST00000472789 MYH13Q9UKX3 1938 aa12.85□□□□□ -0.35
SMARCD3-208ENST00000472789 MAST3O60307 1309 aa12.85□□□□□ -0.35
SMARCD3-208ENST00000472789 PRDX5P30044 214 aa12.84□□□□□ -0.35
SMARCD3-208ENST00000472789 CRKP46108 304 aa12.84□□□□□ -0.35
SMARCD3-208ENST00000472789 MMP14P50281 582 aa12.84□□□□□ -0.35
SMARCD3-208ENST00000472789 NBPF9Q3BBW0 867 aa12.84□□□□□ -0.35
SMARCD3-208ENST00000472789 ANGEL2Q5VTE6 544 aaKnown RBP12.84□□□□□ -0.35
SMARCD3-208ENST00000472789 TBC1D9Q6ZT07 1266 aa12.84□□□□□ -0.35
SMARCD3-208ENST00000472789 ERICH6Q7L0X2 663 aa12.84□□□□□ -0.35
SMARCD3-208ENST00000472789 CNTROBQ8N137 903 aa12.84□□□□□ -0.35
SMARCD3-208ENST00000472789 TEKT1Q969V4 418 aa12.84□□□□□ -0.35
SMARCD3-208ENST00000472789 DNAJC2Q99543 621 aaKnown RBP12.84□□□□□ -0.35
SMARCD3-208ENST00000472789 RAI14Q9P0K7 980 aa12.84□□□□□ -0.35
SMARCD3-208ENST00000472789 LRP2BPQ9P2M1 347 aa12.84□□□□□ -0.35
SMARCD3-208ENST00000472789 SUGT1Q9Y2Z0 365 aa12.84□□□□□ -0.35
SMARCD3-208ENST00000472789 PCDHAC2Q9Y5I4 1007 aa12.84□□□□□ -0.35
SMARCD3-208ENST00000472789 ASTN2O75129 1339 aaPredicted RBP12.84□□□□□ -0.35
SMARCD3-208ENST00000472789 PDS5AQ29RF7 1337 aaKnown RBP12.84□□□□□ -0.35
SMARCD3-208ENST00000472789 WNT10BO00744 389 aa12.83□□□□□ -0.36
SMARCD3-208ENST00000472789 MYO1BO43795 1136 aa12.83□□□□□ -0.36
SMARCD3-208ENST00000472789 EIF5BO60841 1220 aaKnown RBP12.83□□□□□ -0.36
SMARCD3-208ENST00000472789 ZAP70P43403 619 aa12.83□□□□□ -0.36
SMARCD3-208ENST00000472789 VEGFBP49765 207 aa12.83□□□□□ -0.36
SMARCD3-208ENST00000472789 KRT26Q7Z3Y9 468 aa12.83□□□□□ -0.36
SMARCD3-208ENST00000472789 ZC3H15Q8WU90 426 aaKnown RBP12.83□□□□□ -0.36
SMARCD3-208ENST00000472789 GLIS2Q9BZE0 524 aaPredicted RBP12.83□□□□□ -0.36
SMARCD3-208ENST00000472789 PRDM10Q9NQV6 1147 aa12.83□□□□□ -0.36
SMARCD3-208ENST00000472789 SERPINA10Q9UK55 444 aa12.83□□□□□ -0.36
SMARCD3-208ENST00000472789 NDUFB9Q9Y6M9 179 aa12.83□□□□□ -0.36
SMARCD3-208ENST00000472789 SALL1Q9NSC2 1324 aa12.83□□□□□ -0.36
SMARCD3-208ENST00000472789 CLRN2A0PK11 232 aa12.82□□□□□ -0.36
SMARCD3-208ENST00000472789 ITGBL1O95965 494 aaPredicted RBP12.82□□□□□ -0.36
SMARCD3-208ENST00000472789 DIXDC1Q155Q3 683 aa12.82□□□□□ -0.36
SMARCD3-208ENST00000472789 USP48Q86UV5 1035 aa12.82□□□□□ -0.36
SMARCD3-208ENST00000472789 SULF1Q8IWU6 871 aa12.82□□□□□ -0.36
SMARCD3-208ENST00000472789 ZNF512BQ96KM6 892 aaPredicted RBP12.82□□□□□ -0.36
SMARCD3-208ENST00000472789 VEZTQ9HBM0 779 aa12.82□□□□□ -0.36
SMARCD3-208ENST00000472789 SCAF8Q9UPN6 1271 aaKnown RBP12.82□□□□□ -0.36
SMARCD3-208ENST00000472789 ZNF646O15015 1829 aaPredicted RBP12.82□□□□□ -0.36
SMARCD3-208ENST00000472789 SPDYE2BA6NHP3 402 aa12.81□□□□□ -0.36
SMARCD3-208ENST00000472789 TRAF5O00463 557 aa12.81□□□□□ -0.36
SMARCD3-208ENST00000472789 ERC2O15083 957 aa12.81□□□□□ -0.36
SMARCD3-208ENST00000472789 SPDYE6P0CI01 402 aa12.81□□□□□ -0.36
SMARCD3-208ENST00000472789 MX1P20591 662 aa12.81□□□□□ -0.36
SMARCD3-208ENST00000472789 TSHZ3Q63HK5 1081 aa12.81□□□□□ -0.36
SMARCD3-208ENST00000472789 CDC37L1Q7L3B6 337 aa12.81□□□□□ -0.36
SMARCD3-208ENST00000472789 PRMT6Q96LA8 375 aaPredicted RBP12.81□□□□□ -0.36
SMARCD3-208ENST00000472789 BOLA2Q9H3K6 86 aa12.81□□□□□ -0.36
SMARCD3-208ENST00000472789 OSBPL3Q9H4L5 887 aa12.81□□□□□ -0.36
SMARCD3-208ENST00000472789 ZNF408Q9H9D4 720 aa12.81□□□□□ -0.36
SMARCD3-208ENST00000472789 ECHDC1Q9NTX5 307 aa12.81□□□□□ -0.36
SMARCD3-208ENST00000472789 AOX1Q06278 1338 aa12.81□□□□□ -0.36
SMARCD3-208ENST00000472789 TNRC18O15417 2968 aaPredicted RBP12.81□□□□□ -0.36
SMARCD3-208ENST00000472789 ADM5C9JUS6 153 aa12.8□□□□□ -0.36
SMARCD3-208ENST00000472789 GOLIM4O00461 696 aa12.8□□□□□ -0.36
SMARCD3-208ENST00000472789 IDH1O75874 414 aaKnown RBP12.8□□□□□ -0.36
SMARCD3-208ENST00000472789 CYP2E1P05181 493 aaPredicted RBP12.8□□□□□ -0.36
SMARCD3-208ENST00000472789 PDE4AP27815 886 aa12.8□□□□□ -0.36
SMARCD3-208ENST00000472789 CTCFP49711 727 aaPredicted RBP12.8□□□□□ -0.36
SMARCD3-208ENST00000472789 GSTO1P78417 241 aa12.8□□□□□ -0.36
SMARCD3-208ENST00000472789 HDLBPQ00341 1268 aaKnown RBP12.8□□□□□ -0.36
SMARCD3-208ENST00000472789 MECOMQ03112 1051 aa12.8□□□□□ -0.36
SMARCD3-208ENST00000472789 PLEKHM2Q8IWE5 1019 aa12.8□□□□□ -0.36
SMARCD3-208ENST00000472789 SLF2Q8IX21 1173 aa12.8□□□□□ -0.36
SMARCD3-208ENST00000472789 MTMR14Q8NCE2 650 aa12.8□□□□□ -0.36
SMARCD3-208ENST00000472789 OTUD7AQ8TE49 926 aaPredicted RBP12.8□□□□□ -0.36
SMARCD3-208ENST00000472789 TDRD3Q9H7E2 651 aaKnown RBP12.8□□□□□ -0.36
SMARCD3-208ENST00000472789 PIH1D3Q9NQM4 214 aaKnown RBP12.8□□□□□ -0.36
SMARCD3-208ENST00000472789 WBP1LQ9NX94 342 aa12.8□□□□□ -0.36
SMARCD3-208ENST00000472789 TMOD2Q9NZR1 351 aa12.8□□□□□ -0.36
SMARCD3-208ENST00000472789 PGAP2Q9UHJ9 254 aa12.8□□□□□ -0.36
SMARCD3-208ENST00000472789 TTC41PQ6P2S7 1318 aa12.8□□□□□ -0.36
SMARCD3-208ENST00000472789 ADAMTSL1Q8N6G6 1762 aa12.79□□□□□ -0.36
SMARCD3-208ENST00000472789 TMEM88BA6NKF7 163 aa12.79□□□□□ -0.36
SMARCD3-208ENST00000472789 ZBTB22O15209 634 aa12.79□□□□□ -0.36
SMARCD3-208ENST00000472789 LDHCP07864 332 aa12.79□□□□□ -0.36
SMARCD3-208ENST00000472789 ATP5JP18859 108 aa12.79□□□□□ -0.36
SMARCD3-208ENST00000472789 LBX1P52954 281 aa12.79□□□□□ -0.36
SMARCD3-208ENST00000472789 PDE1AP54750 535 aa12.79□□□□□ -0.36
SMARCD3-208ENST00000472789 FMR1Q06787 632 aaKnown RBP eCLIP12.79□□□□□ -0.36
SMARCD3-208ENST00000472789 TTF1Q15361 905 aaPredicted RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms