RNA–Protein interactions for RNA: ENST00000472442.2

SCAMP4-207, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-207ENST00000472442 SNAP23O00161 211 aa15.48■□□□□ 0.07
SCAMP4-207ENST00000472442 STOX1Q6ZVD7 989 aa15.48■□□□□ 0.07
SCAMP4-207ENST00000472442 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.48■□□□□ 0.07
SCAMP4-207ENST00000472442 ALDH8A1Q9H2A2 487 aaPredicted RBP15.48■□□□□ 0.07
SCAMP4-207ENST00000472442 MORC2Q9Y6X9 1032 aaPredicted RBP15.48■□□□□ 0.07
SCAMP4-207ENST00000472442 CNTNAP4Q9C0A0 1308 aa15.47■□□□□ 0.07
SCAMP4-207ENST00000472442 CEP135Q66GS9 1140 aa15.47■□□□□ 0.07
SCAMP4-207ENST00000472442 CLEC4GQ6UXB4 293 aa15.47■□□□□ 0.07
SCAMP4-207ENST00000472442 TDRD7Q8NHU6 1098 aaKnown RBP15.47■□□□□ 0.07
SCAMP4-207ENST00000472442 ZNF512BQ96KM6 892 aaPredicted RBP15.47■□□□□ 0.07
SCAMP4-207ENST00000472442 DNAJC25Q9H1X3 360 aa15.47■□□□□ 0.07
SCAMP4-207ENST00000472442 COL4A1P02462 1669 aa15.47■□□□□ 0.07
SCAMP4-207ENST00000472442 BTAF1O14981 1849 aa15.47■□□□□ 0.07
SCAMP4-207ENST00000472442 FOXP2O15409 715 aa15.47■□□□□ 0.07
SCAMP4-207ENST00000472442 NEK1Q96PY6 1258 aa15.47■□□□□ 0.07
SCAMP4-207ENST00000472442 TFIP11Q9UBB9 837 aaKnown RBP15.47■□□□□ 0.07
SCAMP4-207ENST00000472442 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.47■□□□□ 0.07
SCAMP4-207ENST00000472442 V9GYY5 206 aaPredicted RBP15.47■□□□□ 0.07
SCAMP4-207ENST00000472442 MROH5Q6ZUA9 1318 aa15.47■□□□□ 0.07
SCAMP4-207ENST00000472442 PHKA1P46020 1223 aa15.46■□□□□ 0.07
SCAMP4-207ENST00000472442 ZNF165P49910 485 aa15.46■□□□□ 0.07
SCAMP4-207ENST00000472442 KRT32Q14532 448 aa15.46■□□□□ 0.07
SCAMP4-207ENST00000472442 GTF2E1P29083 439 aaPredicted RBP15.46■□□□□ 0.07
SCAMP4-207ENST00000472442 PUM3Q15397 648 aaKnown RBP15.46■□□□□ 0.07
SCAMP4-207ENST00000472442 CCDC102BQ68D86 513 aa15.46■□□□□ 0.07
SCAMP4-207ENST00000472442 SPATA32Q96LK8 384 aa15.46■□□□□ 0.07
SCAMP4-207ENST00000472442 DDX19AQ9NUU7 478 aaKnown RBP15.46■□□□□ 0.07
SCAMP4-207ENST00000472442 ZNF652Q9Y2D9 606 aa15.46■□□□□ 0.07
SCAMP4-207ENST00000472442 LPIN2Q92539 896 aa15.45■□□□□ 0.06
SCAMP4-207ENST00000472442 CLSTN2Q9H4D0 955 aa15.45■□□□□ 0.06
SCAMP4-207ENST00000472442 LAMB2P55268 1798 aa15.45■□□□□ 0.06
SCAMP4-207ENST00000472442 USP27XA6NNY8 438 aa15.45■□□□□ 0.06
SCAMP4-207ENST00000472442 KMT5BQ4FZB7 885 aa15.45■□□□□ 0.06
SCAMP4-207ENST00000472442 CCDC152Q4G0S7 254 aa15.45■□□□□ 0.06
SCAMP4-207ENST00000472442 C3orf67Q6ZVT6 689 aa15.45■□□□□ 0.06
SCAMP4-207ENST00000472442 GJD4Q96KN9 370 aaPredicted RBP15.45■□□□□ 0.06
SCAMP4-207ENST00000472442 PUS7LQ9H0K6 701 aaKnown RBP15.45■□□□□ 0.06
SCAMP4-207ENST00000472442 RTL9Q8NET4 1388 aa15.45■□□□□ 0.06
SCAMP4-207ENST00000472442 NHSQ6T4R5 1651 aa15.45■□□□□ 0.06
SCAMP4-207ENST00000472442 ZBTB22O15209 634 aa15.45■□□□□ 0.06
SCAMP4-207ENST00000472442 ARID5BQ14865 1188 aa15.45■□□□□ 0.06
SCAMP4-207ENST00000472442 AMIGO3Q86WK7 504 aa15.45■□□□□ 0.06
SCAMP4-207ENST00000472442 KRT222Q8N1A0 295 aa15.45■□□□□ 0.06
SCAMP4-207ENST00000472442 CERKQ8TCT0 537 aa15.45■□□□□ 0.06
SCAMP4-207ENST00000472442 MPHOSPH8Q99549 860 aa15.45■□□□□ 0.06
SCAMP4-207ENST00000472442 ZNF215Q9UL58 517 aaPredicted RBP15.45■□□□□ 0.06
SCAMP4-207ENST00000472442 NR1I2O75469 434 aa15.44■□□□□ 0.06
SCAMP4-207ENST00000472442 ZFYP08048 801 aaPredicted RBP15.44■□□□□ 0.06
SCAMP4-207ENST00000472442 ARID4AP29374 1257 aaPredicted RBP15.44■□□□□ 0.06
SCAMP4-207ENST00000472442 HSPA1LP34931 641 aa15.44■□□□□ 0.06
SCAMP4-207ENST00000472442 TERF2Q15554 542 aa15.44■□□□□ 0.06
SCAMP4-207ENST00000472442 ERFEQ4G0M1 354 aa15.44■□□□□ 0.06
SCAMP4-207ENST00000472442 RBM43Q6ZSC3 357 aaKnown RBP15.44■□□□□ 0.06
SCAMP4-207ENST00000472442 ANKRD1Q15327 319 aa15.44■□□□□ 0.06
SCAMP4-207ENST00000472442 WASHC4Q2M389 1173 aa15.44■□□□□ 0.06
SCAMP4-207ENST00000472442 TTLL5Q6EMB2 1281 aa15.44■□□□□ 0.06
SCAMP4-207ENST00000472442 ZNF397Q8NF99 534 aaPredicted RBP15.44■□□□□ 0.06
SCAMP4-207ENST00000472442 SCAND2PQ9GZW5 306 aaPredicted RBP15.44■□□□□ 0.06
SCAMP4-207ENST00000472442 PIH1D3Q9NQM4 214 aaKnown RBP15.44■□□□□ 0.06
SCAMP4-207ENST00000472442 TMEM51Q9NW97 253 aa15.44■□□□□ 0.06
SCAMP4-207ENST00000472442 RC3H1Q5TC82 1133 aaKnown RBP15.43■□□□□ 0.06
SCAMP4-207ENST00000472442 TBC1D9BQ66K14 1250 aa15.43■□□□□ 0.06
SCAMP4-207ENST00000472442 BICD2Q8TD16 824 aa15.43■□□□□ 0.06
SCAMP4-207ENST00000472442 LEO1Q8WVC0 666 aaPredicted RBP15.43■□□□□ 0.06
SCAMP4-207ENST00000472442 APPBP2Q92624 585 aa15.43■□□□□ 0.06
SCAMP4-207ENST00000472442 ARAP2Q8WZ64 1704 aa15.43■□□□□ 0.06
SCAMP4-207ENST00000472442 LAMA4Q16363 1823 aa15.43■□□□□ 0.06
SCAMP4-207ENST00000472442 MYO5AQ9Y4I1 1855 aaKnown RBP15.43■□□□□ 0.06
SCAMP4-207ENST00000472442 LRRFIP1Q32MZ4 808 aaKnown RBP15.42■□□□□ 0.06
SCAMP4-207ENST00000472442 BICDL1Q6ZP65 573 aa15.42■□□□□ 0.06
SCAMP4-207ENST00000472442 LRRC8AQ8IWT6 810 aa15.42■□□□□ 0.06
SCAMP4-207ENST00000472442 SRP68Q9UHB9 627 aaKnown RBP15.42■□□□□ 0.06
SCAMP4-207ENST00000472442 EP400Q96L91 3159 aa15.42■□□□□ 0.06
SCAMP4-207ENST00000472442 AFF2P51816 1311 aa15.42■□□□□ 0.06
SCAMP4-207ENST00000472442 RPS6KA4O75676 772 aa15.42■□□□□ 0.06
SCAMP4-207ENST00000472442 PDCP20941 246 aa15.42■□□□□ 0.06
SCAMP4-207ENST00000472442 Q6ZUG5 572 aa15.42■□□□□ 0.06
SCAMP4-207ENST00000472442 MYH7P12883 1935 aa15.42■□□□□ 0.06
SCAMP4-207ENST00000472442 SCN7AQ01118 1682 aa15.42■□□□□ 0.06
SCAMP4-207ENST00000472442 ADD2P35612 726 aa15.42■□□□□ 0.06
SCAMP4-207ENST00000472442 MEX3CQ5U5Q3 659 aaKnown RBP15.42■□□□□ 0.06
SCAMP4-207ENST00000472442 LRRC2Q9BYS8 371 aa15.42■□□□□ 0.06
SCAMP4-207ENST00000472442 CCNL1Q9UK58 526 aaPredicted RBP15.42■□□□□ 0.06
SCAMP4-207ENST00000472442 E7EWF7 191 aa15.41■□□□□ 0.06
SCAMP4-207ENST00000472442 ONECUT3O60422 494 aaPredicted RBP15.41■□□□□ 0.06
SCAMP4-207ENST00000472442 HSP90B1P14625 803 aaKnown RBP15.41■□□□□ 0.06
SCAMP4-207ENST00000472442 IGHMBP2P38935 993 aaKnown RBP15.41■□□□□ 0.06
SCAMP4-207ENST00000472442 PTPN14Q15678 1187 aa15.41■□□□□ 0.06
SCAMP4-207ENST00000472442 ELF2Q15723 593 aa15.41■□□□□ 0.06
SCAMP4-207ENST00000472442 FBXO38Q6PIJ6 1188 aa15.41■□□□□ 0.06
SCAMP4-207ENST00000472442 PGBD1Q96JS3 809 aa15.41■□□□□ 0.06
SCAMP4-207ENST00000472442 NARFQ9UHQ1 456 aa15.41■□□□□ 0.06
SCAMP4-207ENST00000472442 GNPATO15228 680 aa15.41■□□□□ 0.06
SCAMP4-207ENST00000472442 CDC25BP30305 580 aa15.41■□□□□ 0.06
SCAMP4-207ENST00000472442 SLC9C2Q5TAH2 1124 aa15.41■□□□□ 0.06
SCAMP4-207ENST00000472442 UQCRFS1P1P0C7P4 283 aa15.4■□□□□ 0.06
SCAMP4-207ENST00000472442 SLC5A1P13866 664 aa15.4■□□□□ 0.06
SCAMP4-207ENST00000472442 EXOSC10Q01780 885 aaKnown RBP15.4■□□□□ 0.06
SCAMP4-207ENST00000472442 CHRNDQ07001 517 aa15.4■□□□□ 0.06
SCAMP4-207ENST00000472442 STK3Q13188 491 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms