RNA–Protein interactions for RNA: ENST00000472246.5

NUDCD3-205, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-205ENST00000472246 PDE8BO95263 885 aa12.35□□□□□ -0.43
NUDCD3-205ENST00000472246 ZBTB48P10074 688 aaPredicted RBP12.35□□□□□ -0.43
NUDCD3-205ENST00000472246 IREB2P48200 963 aaKnown RBP12.35□□□□□ -0.43
NUDCD3-205ENST00000472246 NOM1Q5C9Z4 860 aaKnown RBP12.35□□□□□ -0.43
NUDCD3-205ENST00000472246 IFNL1Q8IU54 200 aa12.35□□□□□ -0.43
NUDCD3-205ENST00000472246 FRAT2O75474 233 aaPredicted RBP12.34□□□□□ -0.43
NUDCD3-205ENST00000472246 BCAMP50895 628 aa12.34□□□□□ -0.43
NUDCD3-205ENST00000472246 CACNB3P54284 484 aa12.34□□□□□ -0.43
NUDCD3-205ENST00000472246 TNFAIP1Q13829 316 aa12.34□□□□□ -0.43
NUDCD3-205ENST00000472246 PKN2Q16513 984 aaKnown RBP12.34□□□□□ -0.43
NUDCD3-205ENST00000472246 CAVIN4Q5BKX8 364 aa12.34□□□□□ -0.43
NUDCD3-205ENST00000472246 ANKRD13AQ8IZ07 590 aa12.34□□□□□ -0.43
NUDCD3-205ENST00000472246 TEPSINQ96N21 525 aa12.34□□□□□ -0.43
NUDCD3-205ENST00000472246 TMEM39BQ9GZU3 492 aa12.34□□□□□ -0.43
NUDCD3-205ENST00000472246 ELP3Q9H9T3 547 aa12.34□□□□□ -0.43
NUDCD3-205ENST00000472246 SMC4Q9NTJ3 1288 aa12.34□□□□□ -0.43
NUDCD3-205ENST00000472246 MYH13Q9UKX3 1938 aa12.34□□□□□ -0.43
NUDCD3-205ENST00000472246 ALDH1A1P00352 501 aa12.33□□□□□ -0.44
NUDCD3-205ENST00000472246 FGFR2P21802 821 aa12.33□□□□□ -0.44
NUDCD3-205ENST00000472246 RFX5P48382 616 aaPredicted RBP12.33□□□□□ -0.44
NUDCD3-205ENST00000472246 ALDH1L2Q3SY69 923 aa12.33□□□□□ -0.44
NUDCD3-205ENST00000472246 CNKSR2Q8WXI2 1034 aa12.33□□□□□ -0.44
NUDCD3-205ENST00000472246 HTTP42858 3142 aa12.33□□□□□ -0.44
NUDCD3-205ENST00000472246 UNCXA6NJT0 531 aa12.32□□□□□ -0.44
NUDCD3-205ENST00000472246 TNNI2P48788 182 aa12.32□□□□□ -0.44
NUDCD3-205ENST00000472246 INHBEP58166 350 aa12.32□□□□□ -0.44
NUDCD3-205ENST00000472246 PUM3Q15397 648 aaKnown RBP12.32□□□□□ -0.44
NUDCD3-205ENST00000472246 FBXO46Q6PJ61 603 aaPredicted RBP12.32□□□□□ -0.44
NUDCD3-205ENST00000472246 TBC1D22AQ8WUA7 517 aa12.32□□□□□ -0.44
NUDCD3-205ENST00000472246 TEKT1Q969V4 418 aa12.32□□□□□ -0.44
NUDCD3-205ENST00000472246 OPTNQ96CV9 577 aa12.32□□□□□ -0.44
NUDCD3-205ENST00000472246 PDE4DIPQ5VU43 2346 aa12.32□□□□□ -0.44
NUDCD3-205ENST00000472246 EYA2O00167 538 aa12.31□□□□□ -0.44
NUDCD3-205ENST00000472246 IFIT1P09914 478 aaKnown RBP12.31□□□□□ -0.44
NUDCD3-205ENST00000472246 CRHR2Q13324 411 aa12.31□□□□□ -0.44
NUDCD3-205ENST00000472246 VGLL4Q14135 290 aa12.31□□□□□ -0.44
NUDCD3-205ENST00000472246 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.31□□□□□ -0.44
NUDCD3-205ENST00000472246 ATG9AQ7Z3C6 839 aa12.31□□□□□ -0.44
NUDCD3-205ENST00000472246 PTPN18Q99952 460 aa12.31□□□□□ -0.44
NUDCD3-205ENST00000472246 SIL1Q9H173 461 aa12.31□□□□□ -0.44
NUDCD3-205ENST00000472246 TRIM17Q9Y577 477 aa12.31□□□□□ -0.44
NUDCD3-205ENST00000472246 KIF16BQ96L93 1317 aa12.31□□□□□ -0.44
NUDCD3-205ENST00000472246 TESPA1A2RU30 521 aaPredicted RBP12.3□□□□□ -0.44
NUDCD3-205ENST00000472246 SLC5A1P13866 664 aa12.3□□□□□ -0.44
NUDCD3-205ENST00000472246 HDLBPQ00341 1268 aaKnown RBP12.3□□□□□ -0.44
NUDCD3-205ENST00000472246 APOBEC3HQ6NTF7 200 aaKnown RBP12.3□□□□□ -0.44
NUDCD3-205ENST00000472246 OTOP1Q7RTM1 612 aa12.3□□□□□ -0.44
NUDCD3-205ENST00000472246 TRMT2AQ8IZ69 625 aaKnown RBP12.3□□□□□ -0.44
NUDCD3-205ENST00000472246 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.3□□□□□ -0.44
NUDCD3-205ENST00000472246 ZDHHC15Q96MV8 337 aa12.3□□□□□ -0.44
NUDCD3-205ENST00000472246 NOB1Q9ULX3 412 aaKnown RBP12.3□□□□□ -0.44
NUDCD3-205ENST00000472246 CENPFP49454 3210 aa12.29□□□□□ -0.44
NUDCD3-205ENST00000472246 UBTFL1P0CB47 393 aaPredicted RBP12.29□□□□□ -0.44
NUDCD3-205ENST00000472246 CD99L2Q8TCZ2 262 aa12.29□□□□□ -0.44
NUDCD3-205ENST00000472246 BRI3BPQ8WY22 251 aa12.29□□□□□ -0.44
NUDCD3-205ENST00000472246 LPIN2Q92539 896 aa12.29□□□□□ -0.44
NUDCD3-205ENST00000472246 MS4A4AQ96JQ5 239 aa12.29□□□□□ -0.44
NUDCD3-205ENST00000472246 MAST3O60307 1309 aa12.29□□□□□ -0.44
NUDCD3-205ENST00000472246 BRCA2P51587 3418 aa12.28□□□□□ -0.44
NUDCD3-205ENST00000472246 MAP3K9P80192 1104 aa12.28□□□□□ -0.44
NUDCD3-205ENST00000472246 CAP1Q01518 475 aa12.28□□□□□ -0.44
NUDCD3-205ENST00000472246 OTUD7BQ6GQQ9 843 aa12.28□□□□□ -0.44
NUDCD3-205ENST00000472246 OTUD5Q96G74 571 aa12.28□□□□□ -0.44
NUDCD3-205ENST00000472246 TMOD2Q9NZR1 351 aa12.28□□□□□ -0.44
NUDCD3-205ENST00000472246 PA2G4Q9UQ80 394 aaKnown RBP12.28□□□□□ -0.44
NUDCD3-205ENST00000472246 SUGT1Q9Y2Z0 365 aa12.28□□□□□ -0.44
NUDCD3-205ENST00000472246 CSADQ9Y600 493 aa12.28□□□□□ -0.44
NUDCD3-205ENST00000472246 LRRFIP2Q9Y608 721 aaKnown RBP12.28□□□□□ -0.44
NUDCD3-205ENST00000472246 CCL15-CCL14A0A0B4J2E2 113 aa12.27□□□□□ -0.45
NUDCD3-205ENST00000472246 SLC34A2O95436 690 aa12.27□□□□□ -0.45
NUDCD3-205ENST00000472246 DIXDC1Q155Q3 683 aa12.27□□□□□ -0.45
NUDCD3-205ENST00000472246 CCL15Q16663 113 aa12.27□□□□□ -0.45
NUDCD3-205ENST00000472246 ATP2B3Q16720 1220 aa12.27□□□□□ -0.45
NUDCD3-205ENST00000472246 HHIPL2Q6UWX4 724 aa12.27□□□□□ -0.45
NUDCD3-205ENST00000472246 FAM83AQ86UY5 434 aa12.27□□□□□ -0.45
NUDCD3-205ENST00000472246 WDR66Q8TBY9 1149 aa12.27□□□□□ -0.45
NUDCD3-205ENST00000472246 ZKSCAN4Q969J2 545 aaPredicted RBP12.27□□□□□ -0.45
NUDCD3-205ENST00000472246 ERO1AQ96HE7 468 aa12.27□□□□□ -0.45
NUDCD3-205ENST00000472246 WRNIP1Q96S55 665 aa12.27□□□□□ -0.45
NUDCD3-205ENST00000472246 MEIS3Q99687 375 aa12.27□□□□□ -0.45
NUDCD3-205ENST00000472246 SNCAIPQ9Y6H5 919 aa12.27□□□□□ -0.45
NUDCD3-205ENST00000472246 RPAP1Q9BWH6 1393 aaPredicted RBP12.27□□□□□ -0.45
NUDCD3-205ENST00000472246 SPDYE5A6NIY4 337 aa12.26□□□□□ -0.45
NUDCD3-205ENST00000472246 CIAO1O76071 339 aa12.26□□□□□ -0.45
NUDCD3-205ENST00000472246 CT47B1P0C2W7 299 aaPredicted RBP12.26□□□□□ -0.45
NUDCD3-205ENST00000472246 PRDX5P30044 214 aa12.26□□□□□ -0.45
NUDCD3-205ENST00000472246 PHKA1P46020 1223 aa12.26□□□□□ -0.45
NUDCD3-205ENST00000472246 SP3Q02447 781 aa12.26□□□□□ -0.45
NUDCD3-205ENST00000472246 FKBP1CQ5VVH2 108 aa12.26□□□□□ -0.45
NUDCD3-205ENST00000472246 FAM43AQ8N2R8 423 aa12.26□□□□□ -0.45
NUDCD3-205ENST00000472246 MRIQ9BWK5 157 aa12.26□□□□□ -0.45
NUDCD3-205ENST00000472246 API5Q9BZZ5 524 aaKnown RBP12.26□□□□□ -0.45
NUDCD3-205ENST00000472246 DAGLAQ9Y4D2 1042 aa12.26□□□□□ -0.45
NUDCD3-205ENST00000472246 ZSWIM8A7E2V4 1837 aa12.25□□□□□ -0.45
NUDCD3-205ENST00000472246 ADORA1P30542 326 aa12.25□□□□□ -0.45
NUDCD3-205ENST00000472246 GTF2A2P52657 109 aa12.25□□□□□ -0.45
NUDCD3-205ENST00000472246 NFIAQ12857 509 aa12.25□□□□□ -0.45
NUDCD3-205ENST00000472246 TAF1CQ15572 869 aaPredicted RBP12.25□□□□□ -0.45
NUDCD3-205ENST00000472246 MIGA2Q7L4E1 593 aa12.25□□□□□ -0.45
NUDCD3-205ENST00000472246 EFCC1Q9HA90 598 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms