RNA–Protein interactions for RNA: ENST00000472155.5

UBXN11-213, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-213ENST00000472155 ABCC12Q96J65 1359 aa17.66■□□□□ 0.42
UBXN11-213ENST00000472155 LETM1O95202 739 aaPredicted RBP17.65■□□□□ 0.42
UBXN11-213ENST00000472155 EVCP57679 992 aa17.65■□□□□ 0.42
UBXN11-213ENST00000472155 RALYLQ86SE5 291 aaKnown RBP17.65■□□□□ 0.42
UBXN11-213ENST00000472155 MYL10Q9BUA6 226 aa17.65■□□□□ 0.42
UBXN11-213ENST00000472155 MBD4O95243 580 aa17.65■□□□□ 0.42
UBXN11-213ENST00000472155 UBE3CQ15386 1083 aa17.65■□□□□ 0.42
UBXN11-213ENST00000472155 ERFEQ4G0M1 354 aa17.65■□□□□ 0.42
UBXN11-213ENST00000472155 ERCC4Q92889 916 aaPredicted RBP17.65■□□□□ 0.42
UBXN11-213ENST00000472155 ZKSCAN5Q9Y2L8 839 aa17.65■□□□□ 0.42
UBXN11-213ENST00000472155 THRAP3Q9Y2W1 955 aaKnown RBP17.65■□□□□ 0.42
UBXN11-213ENST00000472155 POLR3DP05423 398 aaPredicted RBP17.64■□□□□ 0.41
UBXN11-213ENST00000472155 TYRO3Q06418 890 aa17.64■□□□□ 0.41
UBXN11-213ENST00000472155 CHRNDQ07001 517 aa17.64■□□□□ 0.41
UBXN11-213ENST00000472155 MAP3K11Q16584 847 aa17.64■□□□□ 0.41
UBXN11-213ENST00000472155 NAA16Q6N069 864 aaPredicted RBP17.64■□□□□ 0.41
UBXN11-213ENST00000472155 SLC51AQ86UW1 340 aa17.64■□□□□ 0.41
UBXN11-213ENST00000472155 LUZP1Q86V48 1076 aa17.64■□□□□ 0.41
UBXN11-213ENST00000472155 MIGA1Q8NAN2 632 aa17.64■□□□□ 0.41
UBXN11-213ENST00000472155 TNMDQ9H2S6 317 aa17.64■□□□□ 0.41
UBXN11-213ENST00000472155 SLC5A1P13866 664 aa17.64■□□□□ 0.41
UBXN11-213ENST00000472155 HMGN5P82970 282 aaKnown RBP17.64■□□□□ 0.41
UBXN11-213ENST00000472155 TTF1Q15361 905 aaPredicted RBP17.64■□□□□ 0.41
UBXN11-213ENST00000472155 AIDAQ96BJ3 306 aa17.64■□□□□ 0.41
UBXN11-213ENST00000472155 CDCA7Q9BWT1 371 aaPredicted RBP17.64■□□□□ 0.41
UBXN11-213ENST00000472155 ZSCAN16Q9H4T2 348 aaPredicted RBP17.64■□□□□ 0.41
UBXN11-213ENST00000472155 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.64■□□□□ 0.41
UBXN11-213ENST00000472155 PTMAP06454 111 aaKnown RBP17.63■□□□□ 0.41
UBXN11-213ENST00000472155 KIF28PB7ZC32 967 aa17.63■□□□□ 0.41
UBXN11-213ENST00000472155 PDIA4P13667 645 aaKnown RBP17.63■□□□□ 0.41
UBXN11-213ENST00000472155 HS1BP3Q53T59 392 aa17.63■□□□□ 0.41
UBXN11-213ENST00000472155 ADGRA1Q86SQ6 560 aa17.63■□□□□ 0.41
UBXN11-213ENST00000472155 AMIGO3Q86WK7 504 aa17.63■□□□□ 0.41
UBXN11-213ENST00000472155 C17orf53Q8N3J3 647 aaPredicted RBP17.63■□□□□ 0.41
UBXN11-213ENST00000472155 LCORLQ8N3X6 602 aa17.63■□□□□ 0.41
UBXN11-213ENST00000472155 TTC12Q9H892 705 aaPredicted RBP17.63■□□□□ 0.41
UBXN11-213ENST00000472155 MYH15Q9Y2K3 1946 aa17.63■□□□□ 0.41
UBXN11-213ENST00000472155 ATRNO75882 1429 aa17.62■□□□□ 0.41
UBXN11-213ENST00000472155 CDC27P30260 824 aa17.62■□□□□ 0.41
UBXN11-213ENST00000472155 CCDC152Q4G0S7 254 aa17.62■□□□□ 0.41
UBXN11-213ENST00000472155 FBXL16Q8N461 479 aa17.62■□□□□ 0.41
UBXN11-213ENST00000472155 C8orf37Q96NL8 207 aa17.62■□□□□ 0.41
UBXN11-213ENST00000472155 ORC3Q9UBD5 711 aaPredicted RBP17.62■□□□□ 0.41
UBXN11-213ENST00000472155 UQCRFS1P1P0C7P4 283 aa17.62■□□□□ 0.41
UBXN11-213ENST00000472155 GYG1P46976 350 aa17.62■□□□□ 0.41
UBXN11-213ENST00000472155 ANO6Q4KMQ2 910 aa17.62■□□□□ 0.41
UBXN11-213ENST00000472155 ZSCAN25Q6NSZ9 544 aa17.62■□□□□ 0.41
UBXN11-213ENST00000472155 PHKBQ93100 1093 aa17.62■□□□□ 0.41
UBXN11-213ENST00000472155 CLSTN2Q9H4D0 955 aa17.62■□□□□ 0.41
UBXN11-213ENST00000472155 CCDC192P0DO97 292 aa17.61■□□□□ 0.41
UBXN11-213ENST00000472155 UVSSAQ2YD98 709 aa17.61■□□□□ 0.41
UBXN11-213ENST00000472155 IFNL3Q8IZI9 196 aa17.61■□□□□ 0.41
UBXN11-213ENST00000472155 CCDC39Q9UFE4 941 aa17.61■□□□□ 0.41
UBXN11-213ENST00000472155 MICU3Q86XE3 530 aa17.61■□□□□ 0.41
UBXN11-213ENST00000472155 SRP68Q9UHB9 627 aaKnown RBP17.61■□□□□ 0.41
UBXN11-213ENST00000472155 RCOR1Q9UKL0 485 aa17.61■□□□□ 0.41
UBXN11-213ENST00000472155 CLIC4Q9Y696 253 aa17.61■□□□□ 0.41
UBXN11-213ENST00000472155 GSG1L2A8MUP6 293 aa17.6■□□□□ 0.41
UBXN11-213ENST00000472155 IGHMBP2P38935 993 aaKnown RBP17.6■□□□□ 0.41
UBXN11-213ENST00000472155 PARP10Q53GL7 1025 aa17.6■□□□□ 0.41
UBXN11-213ENST00000472155 CCAR1Q8IX12 1150 aaKnown RBP17.6■□□□□ 0.41
UBXN11-213ENST00000472155 ZKSCAN3Q9BRR0 538 aa17.6■□□□□ 0.41
UBXN11-213ENST00000472155 CFAP45Q9UL16 551 aa17.6■□□□□ 0.41
UBXN11-213ENST00000472155 SH2B2O14492 632 aaPredicted RBP17.6■□□□□ 0.41
UBXN11-213ENST00000472155 KLRK1P26718 216 aa17.6■□□□□ 0.41
UBXN11-213ENST00000472155 BARGINQ6ZT62 677 aa17.6■□□□□ 0.41
UBXN11-213ENST00000472155 ARAP2Q8WZ64 1704 aa17.59■□□□□ 0.41
UBXN11-213ENST00000472155 SNW1Q13573 536 aaKnown RBP17.59■□□□□ 0.41
UBXN11-213ENST00000472155 TBC1D9BQ66K14 1250 aa17.59■□□□□ 0.41
UBXN11-213ENST00000472155 SPC24Q8NBT2 197 aa17.59■□□□□ 0.41
UBXN11-213ENST00000472155 C8orf76Q96K31 380 aa17.59■□□□□ 0.41
UBXN11-213ENST00000472155 DNAJC25Q9H1X3 360 aa17.59■□□□□ 0.41
UBXN11-213ENST00000472155 BCL2L12Q9HB09 334 aa17.59■□□□□ 0.41
UBXN11-213ENST00000472155 CBX8Q9HC52 389 aa17.59■□□□□ 0.41
UBXN11-213ENST00000472155 CPLX1O14810 134 aa17.59■□□□□ 0.41
UBXN11-213ENST00000472155 TRDNQ13061 729 aa17.59■□□□□ 0.41
UBXN11-213ENST00000472155 IGDCC4Q8TDY8 1250 aa17.59■□□□□ 0.41
UBXN11-213ENST00000472155 CELF1Q92879 486 aaKnown RBP17.59■□□□□ 0.41
UBXN11-213ENST00000472155 AK7Q96M32 723 aa17.59■□□□□ 0.41
UBXN11-213ENST00000472155 ZSWIM5Q9P217 1185 aa17.59■□□□□ 0.41
UBXN11-213ENST00000472155 ANGEL1Q9UNK9 670 aaKnown RBP17.59■□□□□ 0.41
UBXN11-213ENST00000472155 RREB1Q92766 1687 aa17.58■□□□□ 0.41
UBXN11-213ENST00000472155 MAP3K12Q12852 859 aa17.58■□□□□ 0.41
UBXN11-213ENST00000472155 DDX19AQ9NUU7 478 aaKnown RBP17.58■□□□□ 0.41
UBXN11-213ENST00000472155 ABCF2Q9UG63 623 aa17.58■□□□□ 0.41
UBXN11-213ENST00000472155 COL1A1P02452 1464 aaPredicted RBP17.58■□□□□ 0.4
UBXN11-213ENST00000472155 PATL2C9JE40 543 aaKnown RBP17.58■□□□□ 0.4
UBXN11-213ENST00000472155 ME1P48163 572 aa17.58■□□□□ 0.4
UBXN11-213ENST00000472155 RRP12Q5JTH9 1297 aaKnown RBP17.58■□□□□ 0.4
UBXN11-213ENST00000472155 APOA5Q6Q788 366 aa17.58■□□□□ 0.4
UBXN11-213ENST00000472155 RBM43Q6ZSC3 357 aaKnown RBP17.58■□□□□ 0.4
UBXN11-213ENST00000472155 FBXO18Q8NFZ0 1043 aa17.58■□□□□ 0.4
UBXN11-213ENST00000472155 SDR42E1Q8WUS8 393 aa17.58■□□□□ 0.4
UBXN11-213ENST00000472155 NAPBQ9H115 298 aa17.58■□□□□ 0.4
UBXN11-213ENST00000472155 C4AP0C0L4 1744 aa17.58■□□□□ 0.4
UBXN11-213ENST00000472155 C4BP0C0L5 1744 aa17.58■□□□□ 0.4
UBXN11-213ENST00000472155 BCL9LQ86UU0 1499 aa17.58■□□□□ 0.4
UBXN11-213ENST00000472155 ZNF500O60304 480 aaPredicted RBP17.57■□□□□ 0.4
UBXN11-213ENST00000472155 FBXW7Q969H0 707 aa17.57■□□□□ 0.4
UBXN11-213ENST00000472155 LY9Q9HBG7 655 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms