RNA–Protein interactions for RNA: ENST00000471660.5

CHMP2B-203, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 2 BASIC

Gene CHMP2B, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-203ENST00000471660 FMNL3Q8IVF7 1028 aa12.43□□□□□ -0.42
CHMP2B-203ENST00000471660 GIMAP7Q8NHV1 300 aa12.43□□□□□ -0.42
CHMP2B-203ENST00000471660 IP6K1Q92551 441 aa12.43□□□□□ -0.42
CHMP2B-203ENST00000471660 AKAP2Q9Y2D5 859 aa12.43□□□□□ -0.42
CHMP2B-203ENST00000471660 C10orf71Q711Q0 1435 aa12.42□□□□□ -0.42
CHMP2B-203ENST00000471660 GOLGA6L19H0YKK7 550 aa12.42□□□□□ -0.42
CHMP2B-203ENST00000471660 EIF3JO75822 258 aaKnown RBP12.42□□□□□ -0.42
CHMP2B-203ENST00000471660 TTLL5Q6EMB2 1281 aa12.42□□□□□ -0.42
CHMP2B-203ENST00000471660 NBPF3Q9H094 633 aa12.42□□□□□ -0.42
CHMP2B-203ENST00000471660 MCM8Q9UJA3 840 aa12.42□□□□□ -0.42
CHMP2B-203ENST00000471660 MTMR6Q9Y217 621 aa12.42□□□□□ -0.42
CHMP2B-203ENST00000471660 PXDNLA1KZ92 1463 aa12.42□□□□□ -0.42
CHMP2B-203ENST00000471660 HOXB7P09629 217 aa12.42□□□□□ -0.42
CHMP2B-203ENST00000471660 HOXC9P31274 260 aa12.42□□□□□ -0.42
CHMP2B-203ENST00000471660 SETQ01105 290 aaPredicted RBP12.42□□□□□ -0.42
CHMP2B-203ENST00000471660 PARP3Q9Y6F1 533 aa12.42□□□□□ -0.42
CHMP2B-203ENST00000471660 GNAI3P08754 354 aa12.41□□□□□ -0.42
CHMP2B-203ENST00000471660 GPTP24298 496 aa12.41□□□□□ -0.42
CHMP2B-203ENST00000471660 PTF1AQ7RTS3 328 aa12.41□□□□□ -0.42
CHMP2B-203ENST00000471660 TEX11Q8IYF3 940 aa12.41□□□□□ -0.42
CHMP2B-203ENST00000471660 ANKRD44Q8N8A2 993 aa12.41□□□□□ -0.42
CHMP2B-203ENST00000471660 OTUD7AQ8TE49 926 aaPredicted RBP12.41□□□□□ -0.42
CHMP2B-203ENST00000471660 DDX11Q96FC9 970 aa12.41□□□□□ -0.42
CHMP2B-203ENST00000471660 CALR3Q96L12 384 aaKnown RBP12.41□□□□□ -0.42
CHMP2B-203ENST00000471660 CARD6Q9BX69 1037 aa12.41□□□□□ -0.42
CHMP2B-203ENST00000471660 DNAJC25Q9H1X3 360 aa12.41□□□□□ -0.42
CHMP2B-203ENST00000471660 FAM208AQ9UK61 1670 aaKnown RBP12.41□□□□□ -0.42
CHMP2B-203ENST00000471660 GCFC2P16383 781 aaKnown RBP12.41□□□□□ -0.42
CHMP2B-203ENST00000471660 USP5P45974 858 aa12.41□□□□□ -0.42
CHMP2B-203ENST00000471660 HSP90AB2PQ58FF8 381 aa12.41□□□□□ -0.42
CHMP2B-203ENST00000471660 TRIM65Q6PJ69 517 aa12.41□□□□□ -0.42
CHMP2B-203ENST00000471660 CWC27Q6UX04 472 aaKnown RBP12.41□□□□□ -0.42
CHMP2B-203ENST00000471660 POTEDQ86YR6 584 aa12.41□□□□□ -0.42
CHMP2B-203ENST00000471660 FAM71BQ8TC56 605 aa12.41□□□□□ -0.42
CHMP2B-203ENST00000471660 PARD6BQ9BYG5 372 aa12.41□□□□□ -0.42
CHMP2B-203ENST00000471660 KRT85P78386 507 aa12.4□□□□□ -0.42
CHMP2B-203ENST00000471660 DDB1Q16531 1140 aa12.4□□□□□ -0.42
CHMP2B-203ENST00000471660 CAMK4Q16566 473 aa12.4□□□□□ -0.42
CHMP2B-203ENST00000471660 PLEKHO1Q53GL0 409 aaPredicted RBP12.4□□□□□ -0.42
CHMP2B-203ENST00000471660 TTC6Q86TZ1 520 aa12.4□□□□□ -0.42
CHMP2B-203ENST00000471660 RPAP2Q8IXW5 612 aaPredicted RBP12.4□□□□□ -0.42
CHMP2B-203ENST00000471660 CKAP2LQ8IYA6 745 aa12.4□□□□□ -0.42
CHMP2B-203ENST00000471660 PRPF38AQ8NAV1 312 aaKnown RBP12.4□□□□□ -0.42
CHMP2B-203ENST00000471660 DACT1Q9NYF0 836 aa12.4□□□□□ -0.42
CHMP2B-203ENST00000471660 SMC3Q9UQE7 1217 aa12.4□□□□□ -0.42
CHMP2B-203ENST00000471660 USP16Q9Y5T5 823 aa12.4□□□□□ -0.42
CHMP2B-203ENST00000471660 NRDCO43847 1150 aa12.4□□□□□ -0.42
CHMP2B-203ENST00000471660 CRYMQ14894 314 aa12.4□□□□□ -0.42
CHMP2B-203ENST00000471660 NOL8Q76FK4 1167 aaKnown RBP12.4□□□□□ -0.42
CHMP2B-203ENST00000471660 HDXQ7Z353 690 aa12.4□□□□□ -0.42
CHMP2B-203ENST00000471660 NUTM1Q86Y26 1132 aa12.4□□□□□ -0.42
CHMP2B-203ENST00000471660 OTUD6BQ8N6M0 293 aa12.4□□□□□ -0.42
CHMP2B-203ENST00000471660 ABTB2Q8N961 1025 aa12.4□□□□□ -0.42
CHMP2B-203ENST00000471660 BORCS6Q96GS4 357 aa12.4□□□□□ -0.42
CHMP2B-203ENST00000471660 TTC14Q96N46 770 aa12.4□□□□□ -0.42
CHMP2B-203ENST00000471660 CDCA7Q9BWT1 371 aaPredicted RBP12.4□□□□□ -0.42
CHMP2B-203ENST00000471660 VEZTQ9HBM0 779 aa12.4□□□□□ -0.42
CHMP2B-203ENST00000471660 BTAF1O14981 1849 aa12.4□□□□□ -0.42
CHMP2B-203ENST00000471660 GNAT3A8MTJ3 354 aa12.39□□□□□ -0.43
CHMP2B-203ENST00000471660 MRPL12P52815 198 aaKnown RBP12.39□□□□□ -0.43
CHMP2B-203ENST00000471660 VPS53Q5VIR6 699 aa12.39□□□□□ -0.43
CHMP2B-203ENST00000471660 MPHOSPH8Q99549 860 aa12.39□□□□□ -0.43
CHMP2B-203ENST00000471660 PDE11AQ9HCR9 933 aa12.39□□□□□ -0.43
CHMP2B-203ENST00000471660 ATXN2Q99700 1313 aaKnown RBP12.39□□□□□ -0.43
CHMP2B-203ENST00000471660 CTAGE5O15320 804 aa12.39□□□□□ -0.43
CHMP2B-203ENST00000471660 TXLNAP40222 546 aa12.39□□□□□ -0.43
CHMP2B-203ENST00000471660 ZNF827Q17R98 1081 aa12.39□□□□□ -0.43
CHMP2B-203ENST00000471660 AMOTQ4VCS5 1084 aa12.39□□□□□ -0.43
CHMP2B-203ENST00000471660 TATDN2Q93075 761 aa12.39□□□□□ -0.43
CHMP2B-203ENST00000471660 EYA1Q99502 592 aa12.39□□□□□ -0.43
CHMP2B-203ENST00000471660 CCT4P50991 539 aaKnown RBP12.38□□□□□ -0.43
CHMP2B-203ENST00000471660 MAP3K9P80192 1104 aa12.38□□□□□ -0.43
CHMP2B-203ENST00000471660 SCRN1Q12765 414 aa12.38□□□□□ -0.43
CHMP2B-203ENST00000471660 LIMCH1Q9UPQ0 1083 aa12.38□□□□□ -0.43
CHMP2B-203ENST00000471660 POTEB2H3BUK9 544 aa12.38□□□□□ -0.43
CHMP2B-203ENST00000471660 EXOC5O00471 708 aa12.38□□□□□ -0.43
CHMP2B-203ENST00000471660 HSPA4P34932 840 aa12.38□□□□□ -0.43
CHMP2B-203ENST00000471660 ADCY2Q08462 1091 aa12.38□□□□□ -0.43
CHMP2B-203ENST00000471660 GRIK3Q13003 919 aa12.38□□□□□ -0.43
CHMP2B-203ENST00000471660 PREPLQ4J6C6 727 aaPredicted RBP12.38□□□□□ -0.43
CHMP2B-203ENST00000471660 BEND6Q5SZJ8 279 aaPredicted RBP12.38□□□□□ -0.43
CHMP2B-203ENST00000471660 GORABQ5T7V8 394 aa12.38□□□□□ -0.43
CHMP2B-203ENST00000471660 CNNM3Q8NE01 707 aa12.38□□□□□ -0.43
CHMP2B-203ENST00000471660 UPF3BQ9BZI7 483 aaKnown RBP12.38□□□□□ -0.43
CHMP2B-203ENST00000471660 SCAND2PQ9GZW5 306 aaPredicted RBP12.38□□□□□ -0.43
CHMP2B-203ENST00000471660 FAN1Q9Y2M0 1017 aa12.38□□□□□ -0.43
CHMP2B-203ENST00000471660 CD2APQ9Y5K6 639 aa12.38□□□□□ -0.43
CHMP2B-203ENST00000471660 URI1O94763 535 aaPredicted RBP12.37□□□□□ -0.43
CHMP2B-203ENST00000471660 ICA1Q05084 483 aa12.37□□□□□ -0.43
CHMP2B-203ENST00000471660 TPRNQ4KMQ1 711 aa12.37□□□□□ -0.43
CHMP2B-203ENST00000471660 ZC3H12AQ5D1E8 599 aaKnown RBP12.37□□□□□ -0.43
CHMP2B-203ENST00000471660 CPLX2Q6PUV4 134 aaKnown RBP12.37□□□□□ -0.43
CHMP2B-203ENST00000471660 FCHSD1Q86WN1 690 aa12.37□□□□□ -0.43
CHMP2B-203ENST00000471660 GOLGA1Q92805 767 aa12.37□□□□□ -0.43
CHMP2B-203ENST00000471660 AKT1S1Q96B36 256 aa12.37□□□□□ -0.43
CHMP2B-203ENST00000471660 RAB21Q9UL25 225 aa12.37□□□□□ -0.43
CHMP2B-203ENST00000471660 TUBB4BP68371 445 aa12.37□□□□□ -0.43
CHMP2B-203ENST00000471660 STX1AQ16623 288 aa12.37□□□□□ -0.43
CHMP2B-203ENST00000471660 NAIF1Q69YI7 327 aaPredicted RBP12.37□□□□□ -0.43
CHMP2B-203ENST00000471660 HOMER1Q86YM7 354 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms