RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 ZBTB12Q9Y330 459 aaPredicted RBP23.19■■□□□ 1.3
PSPC1-203ENST00000471658 ADGRA1Q86SQ6 560 aa23.18■■□□□ 1.3
PSPC1-203ENST00000471658 OSBP2Q969R2 916 aa23.18■■□□□ 1.3
PSPC1-203ENST00000471658 RFX7Q2KHR2 1363 aa23.17■■□□□ 1.3
PSPC1-203ENST00000471658 ZNF541Q9H0D2 1346 aa23.17■■□□□ 1.3
PSPC1-203ENST00000471658 SEC24BO95487 1268 aa23.17■■□□□ 1.3
PSPC1-203ENST00000471658 CYP7A1P22680 504 aa23.17■■□□□ 1.3
PSPC1-203ENST00000471658 DIXDC1Q155Q3 683 aa23.17■■□□□ 1.3
PSPC1-203ENST00000471658 ZMYM1Q5SVZ6 1142 aa23.17■■□□□ 1.3
PSPC1-203ENST00000471658 ZSCAN25Q6NSZ9 544 aa23.17■■□□□ 1.3
PSPC1-203ENST00000471658 RSBN1LQ6PCB5 846 aaPredicted RBP23.17■■□□□ 1.3
PSPC1-203ENST00000471658 DZIP1Q86YF9 867 aaKnown RBP23.17■■□□□ 1.3
PSPC1-203ENST00000471658 KIAA0825Q8IV33 1275 aa23.17■■□□□ 1.3
PSPC1-203ENST00000471658 HIP1O00291 1037 aa23.16■■□□□ 1.3
PSPC1-203ENST00000471658 ZFYP08048 801 aaPredicted RBP23.16■■□□□ 1.3
PSPC1-203ENST00000471658 EIF6P56537 245 aaKnown RBP23.16■■□□□ 1.3
PSPC1-203ENST00000471658 FKBP1AP62942 108 aaKnown RBP23.16■■□□□ 1.3
PSPC1-203ENST00000471658 UBE3CQ15386 1083 aa23.16■■□□□ 1.3
PSPC1-203ENST00000471658 NAA16Q6N069 864 aaPredicted RBP23.16■■□□□ 1.3
PSPC1-203ENST00000471658 CCDC129Q6ZRS4 1044 aa23.16■■□□□ 1.3
PSPC1-203ENST00000471658 PUS7LQ9H0K6 701 aaKnown RBP23.16■■□□□ 1.3
PSPC1-203ENST00000471658 SCNN1DP51172 638 aa23.15■■□□□ 1.3
PSPC1-203ENST00000471658 LRRFIP1Q32MZ4 808 aaKnown RBP23.15■■□□□ 1.3
PSPC1-203ENST00000471658 ESYT1Q9BSJ8 1104 aa23.15■■□□□ 1.3
PSPC1-203ENST00000471658 TTF2Q9UNY4 1162 aaKnown RBP23.15■■□□□ 1.3
PSPC1-203ENST00000471658 M0R2C6 588 aa23.15■■□□□ 1.3
PSPC1-203ENST00000471658 CASC1Q6TDU7 716 aa23.15■■□□□ 1.3
PSPC1-203ENST00000471658 APPBP2Q92624 585 aa23.15■■□□□ 1.3
PSPC1-203ENST00000471658 GMLQ99445 158 aa23.15■■□□□ 1.3
PSPC1-203ENST00000471658 GJA3Q9Y6H8 435 aa23.15■■□□□ 1.3
PSPC1-203ENST00000471658 TNIP1Q15025 636 aa23.14■■□□□ 1.29
PSPC1-203ENST00000471658 ZNF589Q86UQ0 364 aaPredicted RBP23.14■■□□□ 1.29
PSPC1-203ENST00000471658 MIGA1Q8NAN2 632 aa23.14■■□□□ 1.29
PSPC1-203ENST00000471658 BACH2Q9BYV9 841 aa23.14■■□□□ 1.29
PSPC1-203ENST00000471658 SUGT1Q9Y2Z0 365 aa23.14■■□□□ 1.29
PSPC1-203ENST00000471658 PSME4Q14997 1843 aa23.14■■□□□ 1.29
PSPC1-203ENST00000471658 DICER1Q9UPY3 1922 aaKnown RBP23.14■■□□□ 1.29
PSPC1-203ENST00000471658 MAST3O60307 1309 aa23.13■■□□□ 1.29
PSPC1-203ENST00000471658 MYH7P12883 1935 aa23.13■■□□□ 1.29
PSPC1-203ENST00000471658 SGSM2O43147 1006 aa23.13■■□□□ 1.29
PSPC1-203ENST00000471658 TICAM2Q86XR7 235 aa23.13■■□□□ 1.29
PSPC1-203ENST00000471658 HELLSQ9NRZ9 838 aa23.13■■□□□ 1.29
PSPC1-203ENST00000471658 MCMDC2Q4G0Z9 681 aa23.12■■□□□ 1.29
PSPC1-203ENST00000471658 DYNLL1P63167 89 aaKnown RBP23.11■■□□□ 1.29
PSPC1-203ENST00000471658 RUFY2Q8WXA3 655 aa23.11■■□□□ 1.29
PSPC1-203ENST00000471658 PCDHAC2Q9Y5I4 1007 aa23.11■■□□□ 1.29
PSPC1-203ENST00000471658 SHTN1A0MZ66 631 aa23.11■■□□□ 1.29
PSPC1-203ENST00000471658 GSTO1P78417 241 aa23.1■■□□□ 1.29
PSPC1-203ENST00000471658 AGBL3Q8NEM8 1001 aa23.1■■□□□ 1.29
PSPC1-203ENST00000471658 MROH7-TTC4A0A0A0MT08 1334 aa23.1■■□□□ 1.29
PSPC1-203ENST00000471658 MYO3BQ8WXR4 1341 aa23.1■■□□□ 1.29
PSPC1-203ENST00000471658 MBD4O95243 580 aa23.09■■□□□ 1.29
PSPC1-203ENST00000471658 GMPSP49915 693 aaPredicted RBP23.09■■□□□ 1.29
PSPC1-203ENST00000471658 LCORLQ8N3X6 602 aa23.09■■□□□ 1.29
PSPC1-203ENST00000471658 ARMT1Q9H993 441 aa23.09■■□□□ 1.29
PSPC1-203ENST00000471658 DAGLAQ9Y4D2 1042 aa23.09■■□□□ 1.29
PSPC1-203ENST00000471658 GPAA1O43292 621 aa23.08■■□□□ 1.29
PSPC1-203ENST00000471658 DDNO94850 711 aaPredicted RBP23.08■■□□□ 1.29
PSPC1-203ENST00000471658 LDHCP07864 332 aa23.08■■□□□ 1.29
PSPC1-203ENST00000471658 CRKP46108 304 aa23.08■■□□□ 1.29
PSPC1-203ENST00000471658 MFAP1P55081 439 aaKnown RBP23.08■■□□□ 1.29
PSPC1-203ENST00000471658 RIOK1Q9BRS2 568 aaKnown RBP23.08■■□□□ 1.29
PSPC1-203ENST00000471658 AATFQ9NY61 560 aaKnown RBP eCLIP23.08■■□□□ 1.299e-9■■□□□ 13.1
PSPC1-203ENST00000471658 MAST2Q6P0Q8 1798 aa23.08■■□□□ 1.29
PSPC1-203ENST00000471658 MAGEB6P1A0A0J9YX57 407 aa23.08■■□□□ 1.28
PSPC1-203ENST00000471658 IGSF3O75054 1194 aa23.08■■□□□ 1.28
PSPC1-203ENST00000471658 VPS53Q5VIR6 699 aa23.08■■□□□ 1.28
PSPC1-203ENST00000471658 TIAM2Q8IVF5 1701 aa23.08■■□□□ 1.28
PSPC1-203ENST00000471658 AIDAQ96BJ3 306 aa23.08■■□□□ 1.28
PSPC1-203ENST00000471658 FAM163AQ96GL9 167 aaPredicted RBP23.08■■□□□ 1.28
PSPC1-203ENST00000471658 GAKO14976 1311 aa23.07■■□□□ 1.28
PSPC1-203ENST00000471658 RAD50Q92878 1312 aa23.07■■□□□ 1.28
PSPC1-203ENST00000471658 ADAMTSL1Q8N6G6 1762 aa23.07■■□□□ 1.28
PSPC1-203ENST00000471658 PTH1RQ03431 593 aa23.07■■□□□ 1.28
PSPC1-203ENST00000471658 STRBPQ96SI9 672 aaKnown RBP23.07■■□□□ 1.28
PSPC1-203ENST00000471658 CCDC171Q6TFL3 1326 aa23.07■■□□□ 1.28
PSPC1-203ENST00000471658 MYH2Q9UKX2 1941 aa23.06■■□□□ 1.28
PSPC1-203ENST00000471658 USP17L8P0C7I0 530 aa23.06■■□□□ 1.28
PSPC1-203ENST00000471658 BTDP43251 543 aa23.06■■□□□ 1.28
PSPC1-203ENST00000471658 HHIPL2Q6UWX4 724 aa23.06■■□□□ 1.28
PSPC1-203ENST00000471658 SLF2Q8IX21 1173 aa23.06■■□□□ 1.28
PSPC1-203ENST00000471658 GPC2Q8N158 579 aa23.06■■□□□ 1.28
PSPC1-203ENST00000471658 TEKT1Q969V4 418 aa23.06■■□□□ 1.28
PSPC1-203ENST00000471658 ANO2Q9NQ90 1003 aa23.06■■□□□ 1.28
PSPC1-203ENST00000471658 GPR75-ASB3A0A0A6YYF3 556 aa23.05■■□□□ 1.28
PSPC1-203ENST00000471658 PRKAB2O43741 272 aa23.05■■□□□ 1.28
PSPC1-203ENST00000471658 RBM5P52756 815 aaKnown RBP eCLIP23.05■■□□□ 1.28
PSPC1-203ENST00000471658 CFAP100Q494V2 611 aa23.05■■□□□ 1.28
PSPC1-203ENST00000471658 MRIQ9BWK5 157 aa23.05■■□□□ 1.28
PSPC1-203ENST00000471658 RPS12P25398 132 aaKnown RBP23.04■■□□□ 1.28
PSPC1-203ENST00000471658 HDLBPQ00341 1268 aaKnown RBP23.04■■□□□ 1.28
PSPC1-203ENST00000471658 APOBEC3HQ6NTF7 200 aaKnown RBP23.04■■□□□ 1.28
PSPC1-203ENST00000471658 TMED8Q6PL24 325 aaPredicted RBP23.04■■□□□ 1.28
PSPC1-203ENST00000471658 SH3RF3Q8TEJ3 882 aaPredicted RBP23.04■■□□□ 1.28
PSPC1-203ENST00000471658 LSG1Q9H089 658 aaKnown RBP23.04■■□□□ 1.28
PSPC1-203ENST00000471658 CNOT7Q9UIV1 285 aaKnown RBP23.04■■□□□ 1.28
PSPC1-203ENST00000471658 SERPINA10Q9UK55 444 aa23.04■■□□□ 1.28
PSPC1-203ENST00000471658 DCAF8L1A6NGE4 600 aa23.04■■□□□ 1.28
PSPC1-203ENST00000471658 FOXP2O15409 715 aa23.04■■□□□ 1.28
PSPC1-203ENST00000471658 PPP4CP60510 307 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms