RNA–Protein interactions for RNA: ENST00000471297.1

SMNDC1-204, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 823 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-204ENST00000471297 TNS2Q63HR2 1409 aa7.61□□□□□ -1.19
SMNDC1-204ENST00000471297 CACNA1FO60840 1977 aa7.6□□□□□ -1.19
SMNDC1-204ENST00000471297 PRAMEF22A3QJZ6 481 aa7.6□□□□□ -1.19
SMNDC1-204ENST00000471297 F6X3S4 739 aa7.6□□□□□ -1.19
SMNDC1-204ENST00000471297 GNRH1P01148 92 aa7.6□□□□□ -1.19
SMNDC1-204ENST00000471297 RASA1P20936 1047 aa7.6□□□□□ -1.19
SMNDC1-204ENST00000471297 ATP1A2P50993 1020 aa7.6□□□□□ -1.19
SMNDC1-204ENST00000471297 GTF2IP78347 998 aa7.6□□□□□ -1.19
SMNDC1-204ENST00000471297 SCARF1Q14162 830 aa7.6□□□□□ -1.19
SMNDC1-204ENST00000471297 MEX3CQ5U5Q3 659 aaKnown RBP7.6□□□□□ -1.19
SMNDC1-204ENST00000471297 KSR2Q6VAB6 950 aa7.6□□□□□ -1.19
SMNDC1-204ENST00000471297 TRIM46Q7Z4K8 759 aa7.6□□□□□ -1.19
SMNDC1-204ENST00000471297 OGFOD1Q8N543 542 aa7.6□□□□□ -1.19
SMNDC1-204ENST00000471297 DNAAF4Q8WXU2 420 aa7.6□□□□□ -1.19
SMNDC1-204ENST00000471297 PIGBQ92521 554 aa7.6□□□□□ -1.19
SMNDC1-204ENST00000471297 GCC1Q96CN9 775 aa7.6□□□□□ -1.19
SMNDC1-204ENST00000471297 USP16Q9Y5T5 823 aa7.6□□□□□ -1.19
SMNDC1-204ENST00000471297 PXDNLA1KZ92 1463 aa7.6□□□□□ -1.19
SMNDC1-204ENST00000471297 BCL9LQ86UU0 1499 aa7.6□□□□□ -1.19
SMNDC1-204ENST00000471297 VIRMAQ69YN4 1812 aaKnown RBP7.59□□□□□ -1.19
SMNDC1-204ENST00000471297 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.59□□□□□ -1.19
SMNDC1-204ENST00000471297 A0A1W2PRU2 124 aa7.59□□□□□ -1.19
SMNDC1-204ENST00000471297 LCE2BO14633 110 aa7.59□□□□□ -1.19
SMNDC1-204ENST00000471297 ALDH1L1O75891 902 aa7.59□□□□□ -1.19
SMNDC1-204ENST00000471297 GNAI2P04899 355 aa7.59□□□□□ -1.19
SMNDC1-204ENST00000471297 BMP2P12643 396 aa7.59□□□□□ -1.19
SMNDC1-204ENST00000471297 BMP1P13497 986 aa7.59□□□□□ -1.19
SMNDC1-204ENST00000471297 CLDN10P78369 228 aa7.59□□□□□ -1.19
SMNDC1-204ENST00000471297 C6orf118Q5T5N4 469 aa7.59□□□□□ -1.19
SMNDC1-204ENST00000471297 SMC5Q8IY18 1101 aa7.59□□□□□ -1.19
SMNDC1-204ENST00000471297 LINC00528Q8N1L1 170 aa7.59□□□□□ -1.19
SMNDC1-204ENST00000471297 ANKRD44Q8N8A2 993 aa7.59□□□□□ -1.19
SMNDC1-204ENST00000471297 PURBQ96QR8 312 aaKnown RBP7.59□□□□□ -1.19
SMNDC1-204ENST00000471297 SRCIN1Q9C0H9 1055 aa7.59□□□□□ -1.19
SMNDC1-204ENST00000471297 ATP13A2Q9NQ11 1180 aa7.59□□□□□ -1.19
SMNDC1-204ENST00000471297 DNAAF2Q9NVR5 837 aaKnown RBP7.59□□□□□ -1.19
SMNDC1-204ENST00000471297 LRP6O75581 1613 aa7.59□□□□□ -1.19
SMNDC1-204ENST00000471297 SHANK3Q9BYB0 1731 aa7.58□□□□□ -1.2
SMNDC1-204ENST00000471297 PI4KAP2A4QPH2 592 aa7.58□□□□□ -1.2
SMNDC1-204ENST00000471297 HMMRO75330 724 aa7.58□□□□□ -1.2
SMNDC1-204ENST00000471297 STAU1O95793 577 aaKnown RBP7.58□□□□□ -1.2
SMNDC1-204ENST00000471297 BEND3Q5T5X7 828 aa7.58□□□□□ -1.2
SMNDC1-204ENST00000471297 PI4KAP1Q8N8J0 262 aa7.58□□□□□ -1.2
SMNDC1-204ENST00000471297 MARCH10Q8NA82 808 aaPredicted RBP7.58□□□□□ -1.2
SMNDC1-204ENST00000471297 ZFP42Q96MM3 310 aa7.58□□□□□ -1.2
SMNDC1-204ENST00000471297 MEIS3Q99687 375 aa7.58□□□□□ -1.2
SMNDC1-204ENST00000471297 ATG3Q9NT62 314 aa7.58□□□□□ -1.2
SMNDC1-204ENST00000471297 BCL9O00512 1426 aa7.58□□□□□ -1.2
SMNDC1-204ENST00000471297 ATP10DQ9P241 1426 aa7.58□□□□□ -1.2
SMNDC1-204ENST00000471297 IBTKQ9P2D0 1353 aaPredicted RBP7.58□□□□□ -1.2
SMNDC1-204ENST00000471297 SPINT1O43278 529 aa7.57□□□□□ -1.2
SMNDC1-204ENST00000471297 PTCD1O75127 700 aaKnown RBP7.57□□□□□ -1.2
SMNDC1-204ENST00000471297 STARD3NLO95772 234 aa7.57□□□□□ -1.2
SMNDC1-204ENST00000471297 ANXA1P04083 346 aa7.57□□□□□ -1.2
SMNDC1-204ENST00000471297 ATP8B2P98198 1209 aa7.57□□□□□ -1.2
SMNDC1-204ENST00000471297 NEXNQ0ZGT2 675 aa7.57□□□□□ -1.2
SMNDC1-204ENST00000471297 PROSER3Q2NL68 480 aa7.57□□□□□ -1.2
SMNDC1-204ENST00000471297 CCDC102BQ68D86 513 aa7.57□□□□□ -1.2
SMNDC1-204ENST00000471297 COPS6Q7L5N1 327 aa7.57□□□□□ -1.2
SMNDC1-204ENST00000471297 LARGE2Q8N3Y3 721 aa7.57□□□□□ -1.2
SMNDC1-204ENST00000471297 LINS1Q8NG48 757 aa7.57□□□□□ -1.2
SMNDC1-204ENST00000471297 XAGE3Q8WTP9 111 aa7.57□□□□□ -1.2
SMNDC1-204ENST00000471297 SMARCC1Q92922 1105 aaPredicted RBP7.57□□□□□ -1.2
SMNDC1-204ENST00000471297 PBXIP1Q96AQ6 731 aa7.57□□□□□ -1.2
SMNDC1-204ENST00000471297 USP44Q9H0E7 712 aa7.57□□□□□ -1.2
SMNDC1-204ENST00000471297 ARHGEF10LQ9HCE6 1279 aa7.57□□□□□ -1.2
SMNDC1-204ENST00000471297 RAB6BQ9NRW1 208 aa7.57□□□□□ -1.2
SMNDC1-204ENST00000471297 TRPC5Q9UL62 973 aaPredicted RBP7.57□□□□□ -1.2
SMNDC1-204ENST00000471297 ASAP1Q9ULH1 1129 aa7.57□□□□□ -1.2
SMNDC1-204ENST00000471297 MAP3K2Q9Y2U5 619 aa7.57□□□□□ -1.2
SMNDC1-204ENST00000471297 ADCY9O60503 1353 aa7.57□□□□□ -1.2
SMNDC1-204ENST00000471297 KCPQ6ZWJ8 1503 aa7.57□□□□□ -1.2
SMNDC1-204ENST00000471297 MEN1O00255 615 aa7.56□□□□□ -1.2
SMNDC1-204ENST00000471297 UBTFL1P0CB47 393 aaPredicted RBP7.56□□□□□ -1.2
SMNDC1-204ENST00000471297 MYL6BP14649 208 aa7.56□□□□□ -1.2
SMNDC1-204ENST00000471297 GDF10P55107 478 aa7.56□□□□□ -1.2
SMNDC1-204ENST00000471297 AIMP1Q12904 312 aaKnown RBP7.56□□□□□ -1.2
SMNDC1-204ENST00000471297 PTK7Q13308 1070 aa7.56□□□□□ -1.2
SMNDC1-204ENST00000471297 CRTC2Q53ET0 693 aaPredicted RBP7.56□□□□□ -1.2
SMNDC1-204ENST00000471297 CEP85Q6P2H3 762 aa7.56□□□□□ -1.2
SMNDC1-204ENST00000471297 LRP10Q7Z4F1 713 aa7.56□□□□□ -1.2
SMNDC1-204ENST00000471297 SIRT2Q8IXJ6 389 aa7.56□□□□□ -1.2
SMNDC1-204ENST00000471297 PLBD2Q8NHP8 589 aa7.56□□□□□ -1.2
SMNDC1-204ENST00000471297 CNKSR1Q969H4 720 aa7.56□□□□□ -1.2
SMNDC1-204ENST00000471297 SYTL4Q96C24 671 aaPredicted RBP7.56□□□□□ -1.2
SMNDC1-204ENST00000471297 XAGE2Q96GT9 111 aa7.56□□□□□ -1.2
SMNDC1-204ENST00000471297 NLRP3Q96P20 1036 aa7.56□□□□□ -1.2
SMNDC1-204ENST00000471297 INSM2Q96T92 566 aaPredicted RBP7.56□□□□□ -1.2
SMNDC1-204ENST00000471297 METTL22Q9BUU2 404 aaPredicted RBP7.56□□□□□ -1.2
SMNDC1-204ENST00000471297 DCTPP1Q9H773 170 aa7.56□□□□□ -1.2
SMNDC1-204ENST00000471297 KIAA1024Q9UPX6 916 aa7.56□□□□□ -1.2
SMNDC1-204ENST00000471297 WNK3Q9BYP7 1800 aa7.56□□□□□ -1.2
SMNDC1-204ENST00000471297 PAPPAQ13219 1627 aa7.56□□□□□ -1.2
SMNDC1-204ENST00000471297 AFF2P51816 1311 aa7.55□□□□□ -1.2
SMNDC1-204ENST00000471297 FAM196BA6NMK8 535 aa7.55□□□□□ -1.2
SMNDC1-204ENST00000471297 TMEM229AB2RXF0 380 aa7.55□□□□□ -1.2
SMNDC1-204ENST00000471297 A1BGP04217 495 aa7.55□□□□□ -1.2
SMNDC1-204ENST00000471297 INHAP05111 366 aa7.55□□□□□ -1.2
SMNDC1-204ENST00000471297 RGS3P49796 1198 aa7.55□□□□□ -1.2
SMNDC1-204ENST00000471297 SCNN1DP51172 638 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms