RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 TEPSINQ96N21 525 aa11.41□□□□□ -0.58
SF3A1-206ENST00000471037 PTPN18Q99952 460 aa11.41□□□□□ -0.58
SF3A1-206ENST00000471037 C9orf78Q9NZ63 289 aaPredicted RBP11.41□□□□□ -0.58
SF3A1-206ENST00000471037 ZNF70Q9UC06 446 aaPredicted RBP11.41□□□□□ -0.58
SF3A1-206ENST00000471037 TTF2Q9UNY4 1162 aaKnown RBP11.41□□□□□ -0.58
SF3A1-206ENST00000471037 PTPN22Q9Y2R2 807 aa11.41□□□□□ -0.58
SF3A1-206ENST00000471037 HIBADHP31937 336 aaKnown RBP11.4□□□□□ -0.58
SF3A1-206ENST00000471037 GYG1P46976 350 aa11.4□□□□□ -0.58
SF3A1-206ENST00000471037 DZIP1LQ8IYY4 767 aaKnown RBP11.4□□□□□ -0.58
SF3A1-206ENST00000471037 CD99L2Q8TCZ2 262 aa11.4□□□□□ -0.58
SF3A1-206ENST00000471037 ARMC5Q96C12 935 aa11.4□□□□□ -0.58
SF3A1-206ENST00000471037 OPTNQ96CV9 577 aa11.4□□□□□ -0.58
SF3A1-206ENST00000471037 KAZALD1Q96I82 304 aa11.4□□□□□ -0.58
SF3A1-206ENST00000471037 MS4A4AQ96JQ5 239 aa11.4□□□□□ -0.58
SF3A1-206ENST00000471037 SRCIN1Q9C0H9 1055 aa11.4□□□□□ -0.58
SF3A1-206ENST00000471037 UTYO14607 1347 aa11.39□□□□□ -0.59
SF3A1-206ENST00000471037 MROH5Q6ZUA9 1318 aa11.39□□□□□ -0.59
SF3A1-206ENST00000471037 HDLBPQ00341 1268 aaKnown RBP11.39□□□□□ -0.59
SF3A1-206ENST00000471037 SP3Q02447 781 aa11.39□□□□□ -0.59
SF3A1-206ENST00000471037 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.39□□□□□ -0.59
SF3A1-206ENST00000471037 GCC1Q96CN9 775 aa11.39□□□□□ -0.59
SF3A1-206ENST00000471037 SUCLG2Q96I99 432 aa11.39□□□□□ -0.59
SF3A1-206ENST00000471037 PUS3Q9BZE2 481 aaKnown RBP11.39□□□□□ -0.59
SF3A1-206ENST00000471037 TDRD3Q9H7E2 651 aaKnown RBP11.39□□□□□ -0.59
SF3A1-206ENST00000471037 ELP3Q9H9T3 547 aa11.39□□□□□ -0.59
SF3A1-206ENST00000471037 EFCC1Q9HA90 598 aa11.39□□□□□ -0.59
SF3A1-206ENST00000471037 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.39□□□□□ -0.59
SF3A1-206ENST00000471037 RIPOR2Q9Y4F9 1068 aa11.39□□□□□ -0.59
SF3A1-206ENST00000471037 POTEFA5A3E0 1075 aa11.38□□□□□ -0.59
SF3A1-206ENST00000471037 CRKP46108 304 aa11.38□□□□□ -0.59
SF3A1-206ENST00000471037 TNNI2P48788 182 aa11.38□□□□□ -0.59
SF3A1-206ENST00000471037 RABL6Q3YEC7 729 aaPredicted RBP11.38□□□□□ -0.59
SF3A1-206ENST00000471037 FBXO33Q7Z6M2 555 aa11.38□□□□□ -0.59
SF3A1-206ENST00000471037 CDAN1Q8IWY9 1227 aa11.38□□□□□ -0.59
SF3A1-206ENST00000471037 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.38□□□□□ -0.59
SF3A1-206ENST00000471037 TMEM39BQ9GZU3 492 aa11.38□□□□□ -0.59
SF3A1-206ENST00000471037 RCAN3Q9UKA8 241 aa11.38□□□□□ -0.59
SF3A1-206ENST00000471037 TCP10L2B9ZVM9 353 aa11.37□□□□□ -0.59
SF3A1-206ENST00000471037 NBPF7P0C2Y1 421 aaPredicted RBP11.37□□□□□ -0.59
SF3A1-206ENST00000471037 GTF2A2P52657 109 aa11.37□□□□□ -0.59
SF3A1-206ENST00000471037 MAP3K9P80192 1104 aa11.37□□□□□ -0.59
SF3A1-206ENST00000471037 CAP1Q01518 475 aa11.37□□□□□ -0.59
SF3A1-206ENST00000471037 VGLL4Q14135 290 aa11.37□□□□□ -0.59
SF3A1-206ENST00000471037 SLC4A10Q6U841 1118 aa11.37□□□□□ -0.59
SF3A1-206ENST00000471037 TBC1D22AQ8WUA7 517 aa11.37□□□□□ -0.59
SF3A1-206ENST00000471037 BRI3BPQ8WY22 251 aa11.37□□□□□ -0.59
SF3A1-206ENST00000471037 CCL15-CCL14A0A0B4J2E2 113 aa11.36□□□□□ -0.59
SF3A1-206ENST00000471037 SPDYE5A6NIY4 337 aa11.36□□□□□ -0.59
SF3A1-206ENST00000471037 ARHGEF6Q15052 776 aa11.36□□□□□ -0.59
SF3A1-206ENST00000471037 TAF1CQ15572 869 aaPredicted RBP11.36□□□□□ -0.59
SF3A1-206ENST00000471037 GRIK5Q16478 980 aa11.36□□□□□ -0.59
SF3A1-206ENST00000471037 CCL15Q16663 113 aa11.36□□□□□ -0.59
SF3A1-206ENST00000471037 FKBP1CQ5VVH2 108 aa11.36□□□□□ -0.59
SF3A1-206ENST00000471037 VPS37DQ86XT2 251 aa11.36□□□□□ -0.59
SF3A1-206ENST00000471037 VGLL2Q8N8G2 317 aa11.36□□□□□ -0.59
SF3A1-206ENST00000471037 CNKSR2Q8WXI2 1034 aa11.36□□□□□ -0.59
SF3A1-206ENST00000471037 MRIQ9BWK5 157 aa11.36□□□□□ -0.59
SF3A1-206ENST00000471037 BICC1Q9H694 974 aaKnown RBP11.36□□□□□ -0.59
SF3A1-206ENST00000471037 ZFYVE28Q9HCC9 887 aa11.36□□□□□ -0.59
SF3A1-206ENST00000471037 CSADQ9Y600 493 aa11.36□□□□□ -0.59
SF3A1-206ENST00000471037 RPAP1Q9BWH6 1393 aaPredicted RBP11.36□□□□□ -0.59
SF3A1-206ENST00000471037 KIF16BQ96L93 1317 aa11.35□□□□□ -0.59
SF3A1-206ENST00000471037 PDE8BO95263 885 aa11.35□□□□□ -0.59
SF3A1-206ENST00000471037 LRRC24Q50LG9 513 aa11.35□□□□□ -0.59
SF3A1-206ENST00000471037 CAVIN4Q5BKX8 364 aa11.35□□□□□ -0.59
SF3A1-206ENST00000471037 FAM83AQ86UY5 434 aa11.35□□□□□ -0.59
SF3A1-206ENST00000471037 FAM43AQ8N2R8 423 aa11.35□□□□□ -0.59
SF3A1-206ENST00000471037 ANKRD44Q8N8A2 993 aa11.35□□□□□ -0.59
SF3A1-206ENST00000471037 TEKT1Q969V4 418 aa11.35□□□□□ -0.59
SF3A1-206ENST00000471037 ZNF333Q96JL9 665 aa11.35□□□□□ -0.59
SF3A1-206ENST00000471037 ZDHHC15Q96MV8 337 aa11.35□□□□□ -0.59
SF3A1-206ENST00000471037 ZCCHC17Q9NP64 241 aaKnown RBP11.35□□□□□ -0.59
SF3A1-206ENST00000471037 SUGT1Q9Y2Z0 365 aa11.35□□□□□ -0.59
SF3A1-206ENST00000471037 MAST3O60307 1309 aa11.35□□□□□ -0.59
SF3A1-206ENST00000471037 MKI67P46013 3256 aaKnown RBP11.34□□□□□ -0.59
SF3A1-206ENST00000471037 BRCA2P51587 3418 aa11.34□□□□□ -0.59
SF3A1-206ENST00000471037 RARSP54136 660 aaKnown RBP11.34□□□□□ -0.59
SF3A1-206ENST00000471037 CHAF1AQ13111 956 aaPredicted RBP11.34□□□□□ -0.59
SF3A1-206ENST00000471037 ALDH1L2Q3SY69 923 aa11.34□□□□□ -0.59
SF3A1-206ENST00000471037 METTL24Q5JXM2 366 aa11.34□□□□□ -0.59
SF3A1-206ENST00000471037 ERO1BQ86YB8 467 aa11.34□□□□□ -0.59
SF3A1-206ENST00000471037 HOOK2Q96ED9 719 aa11.34□□□□□ -0.59
SF3A1-206ENST00000471037 OTUD5Q96G74 571 aa11.34□□□□□ -0.59
SF3A1-206ENST00000471037 TMOD2Q9NZR1 351 aa11.34□□□□□ -0.59
SF3A1-206ENST00000471037 IQSEC3Q9UPP2 1182 aaPredicted RBP11.34□□□□□ -0.59
SF3A1-206ENST00000471037 SNCAIPQ9Y6H5 919 aa11.34□□□□□ -0.59
SF3A1-206ENST00000471037 CENPFP49454 3210 aa11.34□□□□□ -0.59
SF3A1-206ENST00000471037 TLR2O60603 784 aa11.33□□□□□ -0.6
SF3A1-206ENST00000471037 WDHD1O75717 1129 aaPredicted RBP11.33□□□□□ -0.6
SF3A1-206ENST00000471037 CETPP11597 493 aa11.33□□□□□ -0.6
SF3A1-206ENST00000471037 EN2P19622 333 aaPredicted RBP11.33□□□□□ -0.6
SF3A1-206ENST00000471037 FGFR2P21802 821 aa11.33□□□□□ -0.6
SF3A1-206ENST00000471037 CACNB3P54284 484 aa11.33□□□□□ -0.6
SF3A1-206ENST00000471037 SLC9C1Q4G0N8 1177 aa11.33□□□□□ -0.6
SF3A1-206ENST00000471037 HABP4Q5JVS0 413 aaKnown RBP11.33□□□□□ -0.6
SF3A1-206ENST00000471037 APOBEC3HQ6NTF7 200 aaKnown RBP11.33□□□□□ -0.6
SF3A1-206ENST00000471037 HHIPL2Q6UWX4 724 aa11.33□□□□□ -0.6
SF3A1-206ENST00000471037 NBPF11Q86T75 865 aa11.33□□□□□ -0.6
SF3A1-206ENST00000471037 TMEM106CQ9BVX2 250 aa11.33□□□□□ -0.6
SF3A1-206ENST00000471037 PTCH2Q9Y6C5 1203 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms