RNA–Protein interactions for RNA: ENST00000470994.1

GPNMB-208, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 538 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-208ENST00000470994 YBX3P16989 372 aaKnown RBP eCLIP8.69□□□□□ -1.02
GPNMB-208ENST00000470994 TARSP26639 723 aaKnown RBP8.69□□□□□ -1.02
GPNMB-208ENST00000470994 IFT43Q96FT9 208 aa8.69□□□□□ -1.02
GPNMB-208ENST00000470994 KLK14Q9P0G3 267 aa8.69□□□□□ -1.02
GPNMB-208ENST00000470994 ZFYVE9O95405 1425 aa8.69□□□□□ -1.02
GPNMB-208ENST00000470994 ADGRB3O60242 1522 aa8.69□□□□□ -1.02
GPNMB-208ENST00000470994 TET3O43151 1660 aa8.69□□□□□ -1.02
GPNMB-208ENST00000470994 F8W735 103 aaPredicted RBP8.68□□□□□ -1.02
GPNMB-208ENST00000470994 GHRHP01286 108 aa8.68□□□□□ -1.02
GPNMB-208ENST00000470994 GRNP28799 593 aaKnown RBP8.68□□□□□ -1.02
GPNMB-208ENST00000470994 PLAURQ03405 335 aa8.68□□□□□ -1.02
GPNMB-208ENST00000470994 FLIIQ13045 1269 aa8.68□□□□□ -1.02
GPNMB-208ENST00000470994 DGKZQ13574 1117 aa8.68□□□□□ -1.02
GPNMB-208ENST00000470994 VTI1AQ96AJ9 217 aa8.68□□□□□ -1.02
GPNMB-208ENST00000470994 PLD4Q96BZ4 506 aa8.68□□□□□ -1.02
GPNMB-208ENST00000470994 NKTRP30414 1462 aaKnown RBP8.68□□□□□ -1.02
GPNMB-208ENST00000470994 COBLO75128 1261 aa8.67□□□□□ -1.02
GPNMB-208ENST00000470994 PSAPP07602 524 aa8.67□□□□□ -1.02
GPNMB-208ENST00000470994 TPRNQ4KMQ1 711 aa8.67□□□□□ -1.02
GPNMB-208ENST00000470994 ZNF772Q68DY9 489 aaPredicted RBP8.67□□□□□ -1.02
GPNMB-208ENST00000470994 HFE2Q6ZVN8 426 aa8.67□□□□□ -1.02
GPNMB-208ENST00000470994 BRINP3Q76B58 766 aa8.67□□□□□ -1.02
GPNMB-208ENST00000470994 CACTIN-AS1Q8N1I8 211 aa8.67□□□□□ -1.02
GPNMB-208ENST00000470994 TLR7Q9NYK1 1049 aaKnown RBP8.67□□□□□ -1.02
GPNMB-208ENST00000470994 RAXQ9Y2V3 346 aa8.67□□□□□ -1.02
GPNMB-208ENST00000470994 CROCC2H7BZ55 1655 aa8.66□□□□□ -1.02
GPNMB-208ENST00000470994 ADAMTS13Q76LX8 1427 aa8.66□□□□□ -1.02
GPNMB-208ENST00000470994 MICAL2O94851 1124 aa8.66□□□□□ -1.02
GPNMB-208ENST00000470994 GLB1P16278 677 aa8.66□□□□□ -1.02
GPNMB-208ENST00000470994 FMNL2Q96PY5 1086 aa8.66□□□□□ -1.02
GPNMB-208ENST00000470994 MUC3BQ9H195 1237 aa8.66□□□□□ -1.02
GPNMB-208ENST00000470994 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.66□□□□□ -1.02
GPNMB-208ENST00000470994 NCOA3Q9Y6Q9 1424 aa8.65□□□□□ -1.02
GPNMB-208ENST00000470994 PIK3R4Q99570 1358 aa8.65□□□□□ -1.02
GPNMB-208ENST00000470994 SPATA31A6Q5VVP1 1343 aa8.65□□□□□ -1.02
GPNMB-208ENST00000470994 ALX3O95076 343 aa8.65□□□□□ -1.02
GPNMB-208ENST00000470994 RXRBP28702 533 aa8.65□□□□□ -1.02
GPNMB-208ENST00000470994 GDF6Q6KF10 455 aaPredicted RBP8.65□□□□□ -1.02
GPNMB-208ENST00000470994 Q6ZS46 218 aa8.65□□□□□ -1.02
GPNMB-208ENST00000470994 IL22RA1Q8N6P7 574 aa8.65□□□□□ -1.02
GPNMB-208ENST00000470994 DDX17Q92841 729 aaKnown RBP8.65□□□□□ -1.02
GPNMB-208ENST00000470994 LOC102724428A0A0B4J2F2 783 aa8.64□□□□□ -1.03
GPNMB-208ENST00000470994 FOXO3O43524 673 aa8.64□□□□□ -1.03
GPNMB-208ENST00000470994 SLC24A1O60721 1099 aa8.64□□□□□ -1.03
GPNMB-208ENST00000470994 IGLV1-40P01703 118 aa8.64□□□□□ -1.03
GPNMB-208ENST00000470994 SIK1P57059 783 aa8.64□□□□□ -1.03
GPNMB-208ENST00000470994 C11orf91Q3C1V1 193 aa8.64□□□□□ -1.03
GPNMB-208ENST00000470994 LRRC59Q96AG4 307 aaKnown RBP8.64□□□□□ -1.03
GPNMB-208ENST00000470994 STOML1Q9UBI4 398 aa8.64□□□□□ -1.03
GPNMB-208ENST00000470994 MAFBQ9Y5Q3 323 aaPredicted RBP8.64□□□□□ -1.03
GPNMB-208ENST00000470994 PTPRUQ92729 1446 aa8.63□□□□□ -1.03
GPNMB-208ENST00000470994 METP08581 1390 aa8.63□□□□□ -1.03
GPNMB-208ENST00000470994 KRTAP4-8A0A0G2JLE6 195 aa8.63□□□□□ -1.03
GPNMB-208ENST00000470994 KIAA1324LA8MWY0 1029 aaPredicted RBP8.63□□□□□ -1.03
GPNMB-208ENST00000470994 DHX15O43143 795 aaKnown RBP8.63□□□□□ -1.03
GPNMB-208ENST00000470994 XYLBO75191 536 aa8.63□□□□□ -1.03
GPNMB-208ENST00000470994 EGFRP00533 1210 aa8.63□□□□□ -1.03
GPNMB-208ENST00000470994 GRIK1P39086 918 aa8.63□□□□□ -1.03
GPNMB-208ENST00000470994 DPYDQ12882 1025 aa8.63□□□□□ -1.03
GPNMB-208ENST00000470994 C8orf37Q96NL8 207 aa8.63□□□□□ -1.03
GPNMB-208ENST00000470994 CEP41Q9BYV8 373 aa8.63□□□□□ -1.03
GPNMB-208ENST00000470994 TFIP11Q9UBB9 837 aaKnown RBP8.63□□□□□ -1.03
GPNMB-208ENST00000470994 RTCBQ9Y3I0 505 aaKnown RBP8.63□□□□□ -1.03
GPNMB-208ENST00000470994 SOX18P35713 384 aa8.62□□□□□ -1.03
GPNMB-208ENST00000470994 RGL3Q3MIN7 710 aa8.62□□□□□ -1.03
GPNMB-208ENST00000470994 MYO19Q96H55 970 aa8.62□□□□□ -1.03
GPNMB-208ENST00000470994 QTRT2Q9H974 415 aaKnown RBP8.62□□□□□ -1.03
GPNMB-208ENST00000470994 ROBO1Q9Y6N7 1651 aa8.62□□□□□ -1.03
GPNMB-208ENST00000470994 AFF2P51816 1311 aa8.61□□□□□ -1.03
GPNMB-208ENST00000470994 GP2P55259 537 aaKnown RBP8.61□□□□□ -1.03
GPNMB-208ENST00000470994 PTK7Q13308 1070 aa8.61□□□□□ -1.03
GPNMB-208ENST00000470994 SETDB1Q15047 1291 aa8.61□□□□□ -1.03
GPNMB-208ENST00000470994 INTS5Q6P9B9 1019 aaKnown RBP8.61□□□□□ -1.03
GPNMB-208ENST00000470994 NSUN5Q96P11 429 aaKnown RBP8.61□□□□□ -1.03
GPNMB-208ENST00000470994 STK26Q9P289 416 aa8.61□□□□□ -1.03
GPNMB-208ENST00000470994 TMEM131LA2VDJ0 1609 aa8.61□□□□□ -1.03
GPNMB-208ENST00000470994 NWD1Q149M9 1564 aa8.61□□□□□ -1.03
GPNMB-208ENST00000470994 J3QW42 95 aa8.6□□□□□ -1.03
GPNMB-208ENST00000470994 HOXD8P13378 290 aaPredicted RBP8.6□□□□□ -1.03
GPNMB-208ENST00000470994 UVSSAQ2YD98 709 aa8.6□□□□□ -1.03
GPNMB-208ENST00000470994 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.6□□□□□ -1.03
GPNMB-208ENST00000470994 ANKMY2Q8IV38 441 aa8.6□□□□□ -1.03
GPNMB-208ENST00000470994 CMTR1Q8N1G2 835 aaKnown RBP8.6□□□□□ -1.03
GPNMB-208ENST00000470994 ORAI2Q96SN7 254 aa8.6□□□□□ -1.03
GPNMB-208ENST00000470994 KDM5AP29375 1690 aaKnown RBP8.59□□□□□ -1.03
GPNMB-208ENST00000470994 FAM196BA6NMK8 535 aa8.59□□□□□ -1.03
GPNMB-208ENST00000470994 USP17L15C9J2P7 530 aa8.59□□□□□ -1.03
GPNMB-208ENST00000470994 USP17L10C9JJH3 530 aa8.59□□□□□ -1.03
GPNMB-208ENST00000470994 USP17L13C9JLJ4 530 aa8.59□□□□□ -1.03
GPNMB-208ENST00000470994 USP17L12C9JPN9 530 aa8.59□□□□□ -1.03
GPNMB-208ENST00000470994 USP17L11C9JVI0 530 aa8.59□□□□□ -1.03
GPNMB-208ENST00000470994 USP17L21D6R901 530 aa8.59□□□□□ -1.03
GPNMB-208ENST00000470994 USP17L18D6R9N7 530 aa8.59□□□□□ -1.03
GPNMB-208ENST00000470994 USP17L22D6RA61 530 aa8.59□□□□□ -1.03
GPNMB-208ENST00000470994 USP17L17D6RBQ6 530 aa8.59□□□□□ -1.03
GPNMB-208ENST00000470994 USP17L19D6RCP7 530 aa8.59□□□□□ -1.03
GPNMB-208ENST00000470994 USP17L20D6RJB6 530 aa8.59□□□□□ -1.03
GPNMB-208ENST00000470994 TAL1P17542 331 aaPredicted RBP8.59□□□□□ -1.03
GPNMB-208ENST00000470994 USP17L24Q0WX57 530 aa8.59□□□□□ -1.03
GPNMB-208ENST00000470994 CRTC2Q53ET0 693 aaPredicted RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms