RNA–Protein interactions for RNA: ENST00000470815.1

HERC3-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-208ENST00000470815 EDN3P14138 238 aa6.31□□□□□ -1.4
HERC3-208ENST00000470815 RXRBP28702 533 aa6.31□□□□□ -1.4
HERC3-208ENST00000470815 DNM1Q05193 864 aaKnown RBP6.31□□□□□ -1.4
HERC3-208ENST00000470815 PAOXQ6QHF9 649 aa6.31□□□□□ -1.4
HERC3-208ENST00000470815 GJD3Q8N144 294 aa6.31□□□□□ -1.4
HERC3-208ENST00000470815 C12orf50Q8NA57 414 aaPredicted RBP6.31□□□□□ -1.4
HERC3-208ENST00000470815 TTC16Q8NEE8 873 aa6.31□□□□□ -1.4
HERC3-208ENST00000470815 ZKSCAN3Q9BRR0 538 aa6.31□□□□□ -1.4
HERC3-208ENST00000470815 BHLHE41Q9C0J9 482 aaPredicted RBP6.31□□□□□ -1.4
HERC3-208ENST00000470815 IVNS1ABPQ9Y6Y0 642 aa6.31□□□□□ -1.4
HERC3-208ENST00000470815 FAM95CA0A1B0GW59 222 aa6.3□□□□□ -1.4
HERC3-208ENST00000470815 TRPA1O75762 1119 aa6.3□□□□□ -1.4
HERC3-208ENST00000470815 EXOSC6Q5RKV6 272 aaKnown RBP6.3□□□□□ -1.4
HERC3-208ENST00000470815 FBXL6Q8N531 539 aa6.3□□□□□ -1.4
HERC3-208ENST00000470815 USP26Q9BXU7 913 aa6.3□□□□□ -1.4
HERC3-208ENST00000470815 EHHADHQ08426 723 aa6.29□□□□□ -1.4
HERC3-208ENST00000470815 C8orf34Q49A92 452 aa6.29□□□□□ -1.4
HERC3-208ENST00000470815 LCE1DQ5T752 114 aa6.29□□□□□ -1.4
HERC3-208ENST00000470815 NFXL1Q6ZNB6 911 aa6.29□□□□□ -1.4
HERC3-208ENST00000470815 C2CD4AQ8NCU7 369 aaPredicted RBP6.29□□□□□ -1.4
HERC3-208ENST00000470815 SNX29Q8TEQ0 813 aa6.29□□□□□ -1.4
HERC3-208ENST00000470815 EZH1Q92800 747 aaPredicted RBP6.29□□□□□ -1.4
HERC3-208ENST00000470815 YIPF2Q9BWQ6 316 aa6.29□□□□□ -1.4
HERC3-208ENST00000470815 POLIQ9UNA4 740 aa6.29□□□□□ -1.4
HERC3-208ENST00000470815 A6NHS1 94 aa6.28□□□□□ -1.4
HERC3-208ENST00000470815 EREGO14944 169 aa6.28□□□□□ -1.4
HERC3-208ENST00000470815 DLGAP3O95886 979 aa6.28□□□□□ -1.4
HERC3-208ENST00000470815 ESRRAP11474 423 aaPredicted RBP6.28□□□□□ -1.4
HERC3-208ENST00000470815 USP11P51784 963 aa6.28□□□□□ -1.4
HERC3-208ENST00000470815 NFKBIBQ15653 356 aa6.28□□□□□ -1.4
HERC3-208ENST00000470815 ZAR1Q86SH2 424 aa6.28□□□□□ -1.4
HERC3-208ENST00000470815 ASIC4Q96FT7 647 aa6.28□□□□□ -1.4
HERC3-208ENST00000470815 FAM129BQ96TA1 746 aa6.28□□□□□ -1.4
HERC3-208ENST00000470815 RBCK1Q9BYM8 510 aa6.28□□□□□ -1.4
HERC3-208ENST00000470815 NRSN2Q9GZP1 204 aa6.28□□□□□ -1.4
HERC3-208ENST00000470815 CCDC87Q9NVE4 849 aa6.28□□□□□ -1.4
HERC3-208ENST00000470815 BSDC1Q9NW68 430 aaPredicted RBP6.28□□□□□ -1.4
HERC3-208ENST00000470815 PRKAG2Q9UGJ0 569 aa6.28□□□□□ -1.4
HERC3-208ENST00000470815 CYP26A1O43174 497 aa6.27□□□□□ -1.41
HERC3-208ENST00000470815 NDUFB5O43674 189 aa6.27□□□□□ -1.41
HERC3-208ENST00000470815 PHACTR2O75167 634 aa6.27□□□□□ -1.41
HERC3-208ENST00000470815 TNFRSF21O75509 655 aa6.27□□□□□ -1.41
HERC3-208ENST00000470815 IGHA2P01877 340 aa6.27□□□□□ -1.41
HERC3-208ENST00000470815 JUNBP17275 347 aaPredicted RBP6.27□□□□□ -1.41
HERC3-208ENST00000470815 ITGB5P18084 799 aa6.27□□□□□ -1.41
HERC3-208ENST00000470815 SOX4Q06945 474 aaPredicted RBP6.27□□□□□ -1.41
HERC3-208ENST00000470815 CDPF1Q6NVV7 123 aa6.27□□□□□ -1.41
HERC3-208ENST00000470815 POU5F2Q8N7G0 328 aa6.27□□□□□ -1.41
HERC3-208ENST00000470815 FBLIM1Q8WUP2 373 aa6.27□□□□□ -1.41
HERC3-208ENST00000470815 BRPF3Q9ULD4 1205 aa6.27□□□□□ -1.41
HERC3-208ENST00000470815 DRD2P14416 443 aa6.26□□□□□ -1.41
HERC3-208ENST00000470815 OGFOD2Q6N063 350 aa6.26□□□□□ -1.41
HERC3-208ENST00000470815 AGBL5Q8NDL9 886 aa6.26□□□□□ -1.41
HERC3-208ENST00000470815 TBC1D32Q96NH3 1257 aa6.26□□□□□ -1.41
HERC3-208ENST00000470815 KRTAP4-7Q9BYR0 210 aa6.26□□□□□ -1.41
HERC3-208ENST00000470815 ADMP35318 185 aa6.25□□□□□ -1.41
HERC3-208ENST00000470815 JAG1P78504 1218 aa6.25□□□□□ -1.41
HERC3-208ENST00000470815 PDE3BQ13370 1112 aa6.25□□□□□ -1.41
HERC3-208ENST00000470815 AAMPQ13685 434 aa6.25□□□□□ -1.41
HERC3-208ENST00000470815 HP1BP3Q5SSJ5 553 aaPredicted RBP6.25□□□□□ -1.41
HERC3-208ENST00000470815 SND1Q7KZF4 910 aaKnown RBP eCLIP6.25□□□□□ -1.41
HERC3-208ENST00000470815 AEBP1Q8IUX7 1158 aa6.25□□□□□ -1.41
HERC3-208ENST00000470815 TP53INP2Q8IXH6 220 aa6.25□□□□□ -1.41
HERC3-208ENST00000470815 SHISA5Q8N114 240 aa6.25□□□□□ -1.41
HERC3-208ENST00000470815 ASAP3Q8TDY4 903 aa6.25□□□□□ -1.41
HERC3-208ENST00000470815 GATA6Q92908 595 aa6.25□□□□□ -1.41
HERC3-208ENST00000470815 DCTN4Q9UJW0 460 aa6.25□□□□□ -1.41
HERC3-208ENST00000470815 AMOTL2Q9Y2J4 779 aa6.25□□□□□ -1.41
HERC3-208ENST00000470815 ADH5P11766 374 aa6.24□□□□□ -1.41
HERC3-208ENST00000470815 CYP27A1Q02318 531 aa6.24□□□□□ -1.41
HERC3-208ENST00000470815 GSTM4Q03013 218 aa6.24□□□□□ -1.41
HERC3-208ENST00000470815 PEAR1Q5VY43 1037 aaPredicted RBP6.24□□□□□ -1.41
HERC3-208ENST00000470815 ALKBH8Q96BT7 664 aaKnown RBP6.24□□□□□ -1.41
HERC3-208ENST00000470815 MAP7Q14244 749 aa6.23□□□□□ -1.41
HERC3-208ENST00000470815 COL19A1Q14993 1142 aa6.23□□□□□ -1.41
HERC3-208ENST00000470815 DMRTB1Q96MA1 342 aa6.23□□□□□ -1.41
HERC3-208ENST00000470815 ZFYVE1Q9HBF4 777 aa6.23□□□□□ -1.41
HERC3-208ENST00000470815 FOXD3Q9UJU5 478 aaPredicted RBP6.23□□□□□ -1.41
HERC3-208ENST00000470815 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.22□□□□□ -1.41
HERC3-208ENST00000470815 FAM170BA6NMN3 283 aa6.22□□□□□ -1.41
HERC3-208ENST00000470815 DUSP27Q5VZP5 1158 aa6.22□□□□□ -1.41
HERC3-208ENST00000470815 FLCNQ8NFG4 579 aa6.22□□□□□ -1.41
HERC3-208ENST00000470815 CLEC4MQ9H2X3 399 aaPredicted RBP6.22□□□□□ -1.41
HERC3-208ENST00000470815 PAK6Q9NQU5 681 aaPredicted RBP6.22□□□□□ -1.41
HERC3-208ENST00000470815 BIN2Q9UBW5 565 aaPredicted RBP6.22□□□□□ -1.41
HERC3-208ENST00000470815 ACTL7BQ9Y614 415 aa6.22□□□□□ -1.41
HERC3-208ENST00000470815 GPR182O15218 404 aa6.21□□□□□ -1.42
HERC3-208ENST00000470815 CYP11A1P05108 521 aa6.21□□□□□ -1.42
HERC3-208ENST00000470815 NEFLP07196 543 aa6.21□□□□□ -1.42
HERC3-208ENST00000470815 C8AP07357 584 aa6.21□□□□□ -1.42
HERC3-208ENST00000470815 PCDH1Q08174 1060 aa6.21□□□□□ -1.42
HERC3-208ENST00000470815 SEMA6CQ9H3T2 930 aa6.21□□□□□ -1.42
HERC3-208ENST00000470815 GSX1Q9H4S2 264 aaPredicted RBP6.21□□□□□ -1.42
HERC3-208ENST00000470815 ACSS3Q9H6R3 686 aa6.21□□□□□ -1.42
HERC3-208ENST00000470815 ZFYVE28Q9HCC9 887 aa6.21□□□□□ -1.42
HERC3-208ENST00000470815 LATS2Q9NRM7 1088 aa6.21□□□□□ -1.42
HERC3-208ENST00000470815 METTL12A8MUP2 240 aa6.2□□□□□ -1.42
HERC3-208ENST00000470815 TREHO43280 583 aa6.2□□□□□ -1.42
HERC3-208ENST00000470815 MAOBP27338 520 aa6.2□□□□□ -1.42
HERC3-208ENST00000470815 DSC3Q14574 896 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms