RNA–Protein interactions for RNA: ENST00000470687.1

UBXN4-206, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-206ENST00000470687 DRD2P14416 443 aa4.92□□□□□ -1.62
UBXN4-206ENST00000470687 NPR3P17342 541 aa4.92□□□□□ -1.62
UBXN4-206ENST00000470687 USP11P51784 963 aa4.92□□□□□ -1.62
UBXN4-206ENST00000470687 ARHGAP4P98171 946 aa4.92□□□□□ -1.62
UBXN4-206ENST00000470687 HOMEZQ8IX15 550 aa4.92□□□□□ -1.62
UBXN4-206ENST00000470687 ANO2Q9NQ90 1003 aa4.92□□□□□ -1.62
UBXN4-206ENST00000470687 GNEQ9Y223 722 aaKnown RBP4.92□□□□□ -1.62
UBXN4-206ENST00000470687 SOX1O00570 391 aaPredicted RBP4.91□□□□□ -1.62
UBXN4-206ENST00000470687 ZNF438Q7Z4V0 828 aa4.91□□□□□ -1.62
UBXN4-206ENST00000470687 WFDC3Q8IUB2 231 aa4.91□□□□□ -1.62
UBXN4-206ENST00000470687 BIN1O00499 593 aa4.9□□□□□ -1.63
UBXN4-206ENST00000470687 BRD1O95696 1058 aa4.9□□□□□ -1.63
UBXN4-206ENST00000470687 ZNF211Q13398 564 aaPredicted RBP4.9□□□□□ -1.63
UBXN4-206ENST00000470687 IKBKEQ14164 716 aa4.9□□□□□ -1.63
UBXN4-206ENST00000470687 ZNF792Q3KQV3 632 aa4.9□□□□□ -1.63
UBXN4-206ENST00000470687 EXOSC6Q5RKV6 272 aaKnown RBP4.9□□□□□ -1.63
UBXN4-206ENST00000470687 ZNF574Q6ZN55 896 aaPredicted RBP4.9□□□□□ -1.63
UBXN4-206ENST00000470687 VN1R5Q7Z5H4 357 aa4.9□□□□□ -1.63
UBXN4-206ENST00000470687 TMEM102Q8N9M5 508 aaPredicted RBP4.9□□□□□ -1.63
UBXN4-206ENST00000470687 GTF3C2Q8WUA4 911 aaPredicted RBP4.9□□□□□ -1.63
UBXN4-206ENST00000470687 BCL7CQ8WUZ0 217 aaPredicted RBP4.9□□□□□ -1.63
UBXN4-206ENST00000470687 YIPF2Q9BWQ6 316 aa4.9□□□□□ -1.63
UBXN4-206ENST00000470687 SOX17Q9H6I2 414 aaPredicted RBP4.9□□□□□ -1.63
UBXN4-206ENST00000470687 LRRC4CQ9HCJ2 640 aa4.9□□□□□ -1.63
UBXN4-206ENST00000470687 STIM2Q9P246 746 aa4.9□□□□□ -1.63
UBXN4-206ENST00000470687 FARP2O94887 1054 aaPredicted RBP4.89□□□□□ -1.63
UBXN4-206ENST00000470687 CES1P23141 567 aa4.89□□□□□ -1.63
UBXN4-206ENST00000470687 SOX4Q06945 474 aaPredicted RBP4.89□□□□□ -1.63
UBXN4-206ENST00000470687 PLCL1Q15111 1095 aa4.89□□□□□ -1.63
UBXN4-206ENST00000470687 DUSP27Q5VZP5 1158 aa4.89□□□□□ -1.63
UBXN4-206ENST00000470687 ZNF765Q7L2R6 523 aa4.89□□□□□ -1.63
UBXN4-206ENST00000470687 ABTB2Q8N961 1025 aa4.89□□□□□ -1.63
UBXN4-206ENST00000470687 C1orf127Q8N9H9 656 aa4.89□□□□□ -1.63
UBXN4-206ENST00000470687 BSNDQ8WZ55 320 aa4.89□□□□□ -1.63
UBXN4-206ENST00000470687 NUDT16Q96DE0 195 aaKnown RBP4.89□□□□□ -1.63
UBXN4-206ENST00000470687 SLC5A6Q9Y289 635 aa4.89□□□□□ -1.63
UBXN4-206ENST00000470687 IVNS1ABPQ9Y6Y0 642 aa4.89□□□□□ -1.63
UBXN4-206ENST00000470687 RB1CC1Q8TDY2 1594 aa4.89□□□□□ -1.63
UBXN4-206ENST00000470687 NACADO15069 1562 aa4.88□□□□□ -1.63
UBXN4-206ENST00000470687 FZD6O60353 706 aa4.88□□□□□ -1.63
UBXN4-206ENST00000470687 ADH5P11766 374 aa4.88□□□□□ -1.63
UBXN4-206ENST00000470687 CYP27A1Q02318 531 aa4.88□□□□□ -1.63
UBXN4-206ENST00000470687 PKN1Q16512 942 aa4.88□□□□□ -1.63
UBXN4-206ENST00000470687 SPRED2Q7Z698 418 aa4.88□□□□□ -1.63
UBXN4-206ENST00000470687 ATCAYQ86WG3 371 aa4.88□□□□□ -1.63
UBXN4-206ENST00000470687 CCER1Q8TC90 406 aaPredicted RBP4.88□□□□□ -1.63
UBXN4-206ENST00000470687 NXPE3Q969Y0 559 aa4.88□□□□□ -1.63
UBXN4-206ENST00000470687 SOWAHDA6NJG2 315 aa4.87□□□□□ -1.63
UBXN4-206ENST00000470687 ICMTO60725 284 aa4.87□□□□□ -1.63
UBXN4-206ENST00000470687 NFICP08651 508 aa4.87□□□□□ -1.63
UBXN4-206ENST00000470687 MAP7Q14244 749 aa4.87□□□□□ -1.63
UBXN4-206ENST00000470687 XKR5Q6UX68 686 aa4.87□□□□□ -1.63
UBXN4-206ENST00000470687 ATG4DQ86TL0 474 aaPredicted RBP4.87□□□□□ -1.63
UBXN4-206ENST00000470687 STK11IPQ8N1F8 1099 aa4.87□□□□□ -1.63
UBXN4-206ENST00000470687 FAM168AQ92567 244 aa4.87□□□□□ -1.63
UBXN4-206ENST00000470687 ZKSCAN3Q9BRR0 538 aa4.87□□□□□ -1.63
UBXN4-206ENST00000470687 NRSN2Q9GZP1 204 aa4.87□□□□□ -1.63
UBXN4-206ENST00000470687 CHRDQ9H2X0 955 aa4.87□□□□□ -1.63
UBXN4-206ENST00000470687 CCDC87Q9NVE4 849 aa4.87□□□□□ -1.63
UBXN4-206ENST00000470687 ACTL7BQ9Y614 415 aa4.87□□□□□ -1.63
UBXN4-206ENST00000470687 ESRRAP11474 423 aaPredicted RBP4.86□□□□□ -1.63
UBXN4-206ENST00000470687 RAB6AP20340 208 aa4.86□□□□□ -1.63
UBXN4-206ENST00000470687 MPSTP25325 297 aa4.86□□□□□ -1.63
UBXN4-206ENST00000470687 KRTAP19-4Q3LI73 84 aa4.86□□□□□ -1.63
UBXN4-206ENST00000470687 LCE5AQ5TCM9 118 aa4.86□□□□□ -1.63
UBXN4-206ENST00000470687 DNAJC14Q6Y2X3 702 aaPredicted RBP4.86□□□□□ -1.63
UBXN4-206ENST00000470687 KSR1Q8IVT5 923 aa4.86□□□□□ -1.63
UBXN4-206ENST00000470687 GLIS3Q8NEA6 775 aa4.86□□□□□ -1.63
UBXN4-206ENST00000470687 HELQQ8TDG4 1101 aa4.86□□□□□ -1.63
UBXN4-206ENST00000470687 OSMRQ99650 979 aa4.86□□□□□ -1.63
UBXN4-206ENST00000470687 SEMA6CQ9H3T2 930 aa4.86□□□□□ -1.63
UBXN4-206ENST00000470687 MYO15BQ96JP2 1530 aa4.86□□□□□ -1.63
UBXN4-206ENST00000470687 A6NHS1 94 aa4.85□□□□□ -1.63
UBXN4-206ENST00000470687 RPLP1P05386 114 aaKnown RBP4.85□□□□□ -1.63
UBXN4-206ENST00000470687 PDIA4P13667 645 aaKnown RBP4.85□□□□□ -1.63
UBXN4-206ENST00000470687 AEBP1Q8IUX7 1158 aa4.85□□□□□ -1.63
UBXN4-206ENST00000470687 TMEM40Q8WWA1 233 aa4.85□□□□□ -1.63
UBXN4-206ENST00000470687 PMEPA1Q969W9 287 aa4.85□□□□□ -1.63
UBXN4-206ENST00000470687 GGNBP2Q9H3C7 697 aa4.85□□□□□ -1.63
UBXN4-206ENST00000470687 ACSS3Q9H6R3 686 aa4.85□□□□□ -1.63
UBXN4-206ENST00000470687 RC3H2Q9HBD1 1191 aaKnown RBP4.85□□□□□ -1.63
UBXN4-206ENST00000470687 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.84□□□□□ -1.63
UBXN4-206ENST00000470687 RNASE1P07998 156 aaKnown RBP4.84□□□□□ -1.63
UBXN4-206ENST00000470687 FUT4P22083 530 aa4.84□□□□□ -1.63
UBXN4-206ENST00000470687 GSTM4Q03013 218 aa4.84□□□□□ -1.63
UBXN4-206ENST00000470687 SEZ6L2Q6UXD5 910 aa4.84□□□□□ -1.63
UBXN4-206ENST00000470687 MISP3Q96FF7 219 aa4.84□□□□□ -1.63
UBXN4-206ENST00000470687 BHLHE41Q9C0J9 482 aaPredicted RBP4.84□□□□□ -1.63
UBXN4-206ENST00000470687 C1GALT1Q9NS00 363 aa4.84□□□□□ -1.63
UBXN4-206ENST00000470687 FAM105AQ9NUU6 356 aa4.84□□□□□ -1.63
UBXN4-206ENST00000470687 RNF19AQ9NV58 838 aa4.84□□□□□ -1.63
UBXN4-206ENST00000470687 CTSBP07858 339 aa4.83□□□□□ -1.64
UBXN4-206ENST00000470687 EIF1AXP47813 144 aaKnown RBP4.83□□□□□ -1.64
UBXN4-206ENST00000470687 TAGLNQ01995 201 aaKnown RBP4.83□□□□□ -1.64
UBXN4-206ENST00000470687 KCNA1Q09470 495 aa4.83□□□□□ -1.64
UBXN4-206ENST00000470687 MESP2Q0VG99 397 aa4.83□□□□□ -1.64
UBXN4-206ENST00000470687 BNIP3Q12983 259 aa4.83□□□□□ -1.64
UBXN4-206ENST00000470687 CILP2Q8IUL8 1156 aa4.83□□□□□ -1.64
UBXN4-206ENST00000470687 ASAP3Q8TDY4 903 aa4.83□□□□□ -1.64
UBXN4-206ENST00000470687 EDEM1Q92611 657 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms