RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 ITGA6P23229 1130 aa11.38□□□□□ -0.59
SYNGAP1-205ENST00000470232 GRK4P32298 578 aa11.38□□□□□ -0.59
SYNGAP1-205ENST00000470232 MTFR1Q15390 333 aa11.38□□□□□ -0.59
SYNGAP1-205ENST00000470232 KSR2Q6VAB6 950 aa11.38□□□□□ -0.59
SYNGAP1-205ENST00000470232 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.38□□□□□ -0.59
SYNGAP1-205ENST00000470232 C15orf52Q6ZUT6 534 aaKnown RBP11.38□□□□□ -0.59
SYNGAP1-205ENST00000470232 FAM43AQ8N2R8 423 aa11.38□□□□□ -0.59
SYNGAP1-205ENST00000470232 CERS5Q8N5B7 392 aa11.38□□□□□ -0.59
SYNGAP1-205ENST00000470232 RNF208Q9H0X6 261 aa11.38□□□□□ -0.59
SYNGAP1-205ENST00000470232 ZNF70Q9UC06 446 aaPredicted RBP11.38□□□□□ -0.59
SYNGAP1-205ENST00000470232 SRRDQ9UH36 339 aa11.38□□□□□ -0.59
SYNGAP1-205ENST00000470232 MYH3P11055 1940 aa11.37□□□□□ -0.59
SYNGAP1-205ENST00000470232 EVI5O60447 810 aa11.37□□□□□ -0.59
SYNGAP1-205ENST00000470232 FMNL1O95466 1100 aaPredicted RBP11.37□□□□□ -0.59
SYNGAP1-205ENST00000470232 PSMC4P43686 418 aa11.37□□□□□ -0.59
SYNGAP1-205ENST00000470232 CALD1Q05682 793 aaKnown RBP11.37□□□□□ -0.59
SYNGAP1-205ENST00000470232 CHRNDQ07001 517 aa11.37□□□□□ -0.59
SYNGAP1-205ENST00000470232 SNAPC2Q13487 334 aa11.37□□□□□ -0.59
SYNGAP1-205ENST00000470232 GPR153Q6NV75 609 aa11.37□□□□□ -0.59
SYNGAP1-205ENST00000470232 ERO1BQ86YB8 467 aa11.37□□□□□ -0.59
SYNGAP1-205ENST00000470232 SHISA4Q96DD7 197 aa11.37□□□□□ -0.59
SYNGAP1-205ENST00000470232 HOOK2Q96ED9 719 aa11.37□□□□□ -0.59
SYNGAP1-205ENST00000470232 ARHGAP39Q9C0H5 1083 aa11.37□□□□□ -0.59
SYNGAP1-205ENST00000470232 MBIPQ9NS73 344 aa11.37□□□□□ -0.59
SYNGAP1-205ENST00000470232 SERPINA10Q9UK55 444 aa11.37□□□□□ -0.59
SYNGAP1-205ENST00000470232 PCDHAC2Q9Y5I4 1007 aa11.37□□□□□ -0.59
SYNGAP1-205ENST00000470232 ANKRD18BA2A2Z9 1011 aa11.36□□□□□ -0.59
SYNGAP1-205ENST00000470232 PI4KAP2A4QPH2 592 aa11.36□□□□□ -0.59
SYNGAP1-205ENST00000470232 BTBD19C9JJ37 291 aa11.36□□□□□ -0.59
SYNGAP1-205ENST00000470232 H7C1W4 665 aa11.36□□□□□ -0.59
SYNGAP1-205ENST00000470232 ELL2O00472 640 aaPredicted RBP11.36□□□□□ -0.59
SYNGAP1-205ENST00000470232 CCL5P13501 91 aa11.36□□□□□ -0.59
SYNGAP1-205ENST00000470232 KLRK1P26718 216 aa11.36□□□□□ -0.59
SYNGAP1-205ENST00000470232 GNAI1P63096 354 aa11.36□□□□□ -0.59
SYNGAP1-205ENST00000470232 VGLL4Q14135 290 aa11.36□□□□□ -0.59
SYNGAP1-205ENST00000470232 SPDYE2Q495Y8 402 aa11.36□□□□□ -0.59
SYNGAP1-205ENST00000470232 CCDC146Q8IYE0 955 aa11.36□□□□□ -0.59
SYNGAP1-205ENST00000470232 PI4KAP1Q8N8J0 262 aa11.36□□□□□ -0.59
SYNGAP1-205ENST00000470232 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.36□□□□□ -0.59
SYNGAP1-205ENST00000470232 PLA2G12BQ9BX93 195 aa11.36□□□□□ -0.59
SYNGAP1-205ENST00000470232 RIPOR2Q9Y4F9 1068 aa11.36□□□□□ -0.59
SYNGAP1-205ENST00000470232 SPEF2Q9C093 1822 aa11.36□□□□□ -0.59
SYNGAP1-205ENST00000470232 CUL9Q8IWT3 2517 aa11.36□□□□□ -0.59
SYNGAP1-205ENST00000470232 SPDYE5A6NIY4 337 aa11.35□□□□□ -0.59
SYNGAP1-205ENST00000470232 FARP2O94887 1054 aaPredicted RBP11.35□□□□□ -0.59
SYNGAP1-205ENST00000470232 IGKV5-2P06315 115 aa11.35□□□□□ -0.59
SYNGAP1-205ENST00000470232 WDR43Q15061 677 aaKnown RBP eCLIP11.35□□□□□ -0.59
SYNGAP1-205ENST00000470232 RALBP1Q15311 655 aa11.35□□□□□ -0.59
SYNGAP1-205ENST00000470232 C17orf99Q6UX52 265 aa11.35□□□□□ -0.59
SYNGAP1-205ENST00000470232 UBE3BQ7Z3V4 1068 aa11.35□□□□□ -0.59
SYNGAP1-205ENST00000470232 UBE2Q1Q7Z7E8 422 aa11.35□□□□□ -0.59
SYNGAP1-205ENST00000470232 TDRD3Q9H7E2 651 aaKnown RBP11.35□□□□□ -0.59
SYNGAP1-205ENST00000470232 MYPNQ86TC9 1320 aa11.35□□□□□ -0.59
SYNGAP1-205ENST00000470232 NEURL1BA8MQ27 555 aa11.34□□□□□ -0.59
SYNGAP1-205ENST00000470232 TCP10L2B9ZVM9 353 aa11.34□□□□□ -0.59
SYNGAP1-205ENST00000470232 TAF5LO75529 589 aa11.34□□□□□ -0.59
SYNGAP1-205ENST00000470232 SGPL1O95470 568 aa11.34□□□□□ -0.59
SYNGAP1-205ENST00000470232 CSF1RP07333 972 aa11.34□□□□□ -0.59
SYNGAP1-205ENST00000470232 OSBPP22059 807 aa11.34□□□□□ -0.59
SYNGAP1-205ENST00000470232 PPIL2Q13356 520 aa11.34□□□□□ -0.59
SYNGAP1-205ENST00000470232 DZIP1LQ8IYY4 767 aaKnown RBP11.34□□□□□ -0.59
SYNGAP1-205ENST00000470232 SLAIN1Q8ND83 568 aa11.34□□□□□ -0.59
SYNGAP1-205ENST00000470232 U2AF1L4Q8WU68 220 aaKnown RBP11.34□□□□□ -0.59
SYNGAP1-205ENST00000470232 TEPSINQ96N21 525 aa11.34□□□□□ -0.59
SYNGAP1-205ENST00000470232 STK31Q9BXU1 1019 aa11.34□□□□□ -0.59
SYNGAP1-205ENST00000470232 IFT57Q9NWB7 429 aa11.34□□□□□ -0.59
SYNGAP1-205ENST00000470232 TTF2Q9UNY4 1162 aaKnown RBP11.34□□□□□ -0.59
SYNGAP1-205ENST00000470232 ECM2O94769 699 aaPredicted RBP11.33□□□□□ -0.6
SYNGAP1-205ENST00000470232 TFRCP02786 760 aaKnown RBP11.33□□□□□ -0.6
SYNGAP1-205ENST00000470232 ZNF853P0CG23 659 aa11.33□□□□□ -0.6
SYNGAP1-205ENST00000470232 PPATQ06203 517 aa11.33□□□□□ -0.6
SYNGAP1-205ENST00000470232 DCAF15Q66K64 600 aa11.33□□□□□ -0.6
SYNGAP1-205ENST00000470232 ANKRD23Q86SG2 305 aa11.33□□□□□ -0.6
SYNGAP1-205ENST00000470232 DEFB123Q8N688 67 aa11.33□□□□□ -0.6
SYNGAP1-205ENST00000470232 LRCH3Q96II8 777 aa11.33□□□□□ -0.6
SYNGAP1-205ENST00000470232 TMEM39BQ9GZU3 492 aa11.33□□□□□ -0.6
SYNGAP1-205ENST00000470232 MYH16Q9H6N6 1097 aa11.33□□□□□ -0.6
SYNGAP1-205ENST00000470232 STAP2Q9UGK3 403 aa11.33□□□□□ -0.6
SYNGAP1-205ENST00000470232 FAM205AQ6ZU69 1335 aa11.33□□□□□ -0.6
SYNGAP1-205ENST00000470232 SOX1O00570 391 aaPredicted RBP11.32□□□□□ -0.6
SYNGAP1-205ENST00000470232 IRF6O14896 467 aa11.32□□□□□ -0.6
SYNGAP1-205ENST00000470232 BMP8BP34820 402 aa11.32□□□□□ -0.6
SYNGAP1-205ENST00000470232 FCGRTP55899 365 aa11.32□□□□□ -0.6
SYNGAP1-205ENST00000470232 IFIT5Q13325 482 aaKnown RBP11.32□□□□□ -0.6
SYNGAP1-205ENST00000470232 CWF19L2Q2TBE0 894 aaKnown RBP11.32□□□□□ -0.6
SYNGAP1-205ENST00000470232 MFSD14BQ5SR56 506 aa11.32□□□□□ -0.6
SYNGAP1-205ENST00000470232 WRNIP1Q96S55 665 aa11.32□□□□□ -0.6
SYNGAP1-205ENST00000470232 TMOD2Q9NZR1 351 aa11.32□□□□□ -0.6
SYNGAP1-205ENST00000470232 CPA4Q9UI42 421 aa11.32□□□□□ -0.6
SYNGAP1-205ENST00000470232 JAG2Q9Y219 1238 aa11.32□□□□□ -0.6
SYNGAP1-205ENST00000470232 STXBP5LQ9Y2K9 1186 aa11.32□□□□□ -0.6
SYNGAP1-205ENST00000470232 OTOFQ9HC10 1997 aa11.32□□□□□ -0.6
SYNGAP1-205ENST00000470232 PDHXO00330 501 aa11.31□□□□□ -0.6
SYNGAP1-205ENST00000470232 CRKP46108 304 aa11.31□□□□□ -0.6
SYNGAP1-205ENST00000470232 GCKRQ14397 625 aa11.31□□□□□ -0.6
SYNGAP1-205ENST00000470232 ZKSCAN4Q969J2 545 aaPredicted RBP11.31□□□□□ -0.6
SYNGAP1-205ENST00000470232 SNCAIPQ9Y6H5 919 aa11.31□□□□□ -0.6
SYNGAP1-205ENST00000470232 AOX1Q06278 1338 aa11.31□□□□□ -0.6
SYNGAP1-205ENST00000470232 IRS2Q9Y4H2 1338 aa11.31□□□□□ -0.6
SYNGAP1-205ENST00000470232 LAMA3Q16787 3333 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms