RNA–Protein interactions for RNA: ENST00000470115.1

GTF3C2-209, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 5

Gene GTF3C2, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-209ENST00000470115 FZD1Q9UP38 647 aa20.38■□□□□ 0.85
GTF3C2-209ENST00000470115 PPP2R3BQ9Y5P8 575 aa20.38■□□□□ 0.85
GTF3C2-209ENST00000470115 COL1A1P02452 1464 aaPredicted RBP20.37■□□□□ 0.85
GTF3C2-209ENST00000470115 CAPN15O75808 1086 aa20.37■□□□□ 0.85
GTF3C2-209ENST00000470115 SPDYE2Q495Y8 402 aa20.37■□□□□ 0.85
GTF3C2-209ENST00000470115 ECM29Q5VYK3 1845 aa20.37■□□□□ 0.85
GTF3C2-209ENST00000470115 HDLBPQ00341 1268 aaKnown RBP20.36■□□□□ 0.85
GTF3C2-209ENST00000470115 RASA3Q14644 834 aa20.36■□□□□ 0.85
GTF3C2-209ENST00000470115 ANGEL1Q9UNK9 670 aaKnown RBP20.36■□□□□ 0.85
GTF3C2-209ENST00000470115 ARAP2Q8WZ64 1704 aa20.36■□□□□ 0.85
GTF3C2-209ENST00000470115 LDLRAD1Q5T700 205 aa20.35■□□□□ 0.85
GTF3C2-209ENST00000470115 NBPF12Q5TAG4 269 aaPredicted RBP20.35■□□□□ 0.85
GTF3C2-209ENST00000470115 WDR66Q8TBY9 1149 aa20.35■□□□□ 0.85
GTF3C2-209ENST00000470115 ADORA1P30542 326 aa20.34■□□□□ 0.85
GTF3C2-209ENST00000470115 TFCP2Q12800 502 aa20.34■□□□□ 0.85
GTF3C2-209ENST00000470115 SUPT20HL1Q3ZLR7 823 aa20.34■□□□□ 0.85
GTF3C2-209ENST00000470115 TEKT1Q969V4 418 aa20.34■□□□□ 0.85
GTF3C2-209ENST00000470115 MRIQ9BWK5 157 aa20.34■□□□□ 0.85
GTF3C2-209ENST00000470115 GNL3LQ9NVN8 582 aaKnown RBP20.34■□□□□ 0.85
GTF3C2-209ENST00000470115 RNF186Q9NXI6 227 aa20.34■□□□□ 0.85
GTF3C2-209ENST00000470115 SUGT1Q9Y2Z0 365 aa20.34■□□□□ 0.85
GTF3C2-209ENST00000470115 SSC5DA1L4H1 1573 aa20.34■□□□□ 0.85
GTF3C2-209ENST00000470115 PNMA6EA0A0J9YXQ4 647 aa20.33■□□□□ 0.85
GTF3C2-209ENST00000470115 TCP10L2B9ZVM9 353 aa20.33■□□□□ 0.85
GTF3C2-209ENST00000470115 PPP1R12BO60237 982 aaPredicted RBP20.33■□□□□ 0.85
GTF3C2-209ENST00000470115 TRPA1O75762 1119 aa20.33■□□□□ 0.85
GTF3C2-209ENST00000470115 PHKA1P46020 1223 aa20.33■□□□□ 0.85
GTF3C2-209ENST00000470115 TIMM10P62072 90 aa20.33■□□□□ 0.85
GTF3C2-209ENST00000470115 TNFAIP1Q13829 316 aa20.33■□□□□ 0.85
GTF3C2-209ENST00000470115 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.33■□□□□ 0.85
GTF3C2-209ENST00000470115 MKRN3Q13064 507 aaKnown RBP20.32■□□□□ 0.84
GTF3C2-209ENST00000470115 FTSJ3Q8IY81 847 aaKnown RBP20.32■□□□□ 0.84
GTF3C2-209ENST00000470115 REM2Q8IYK8 340 aaPredicted RBP20.32■□□□□ 0.84
GTF3C2-209ENST00000470115 MAST3O60307 1309 aa20.31■□□□□ 0.84
GTF3C2-209ENST00000470115 RLBP1P12271 317 aa20.31■□□□□ 0.84
GTF3C2-209ENST00000470115 MAP3K11Q16584 847 aa20.31■□□□□ 0.84
GTF3C2-209ENST00000470115 CCDC102BQ68D86 513 aa20.31■□□□□ 0.84
GTF3C2-209ENST00000470115 SLC10A4Q96EP9 437 aa20.31■□□□□ 0.84
GTF3C2-209ENST00000470115 ZDHHC15Q96MV8 337 aa20.31■□□□□ 0.84
GTF3C2-209ENST00000470115 SAGE1Q9NXZ1 904 aa20.31■□□□□ 0.84
GTF3C2-209ENST00000470115 AKAP2Q9Y2D5 859 aa20.31■□□□□ 0.84
GTF3C2-209ENST00000470115 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.31■□□□□ 0.84
GTF3C2-209ENST00000470115 USP2O75604 605 aaPredicted RBP20.3■□□□□ 0.84
GTF3C2-209ENST00000470115 CACNB3P54284 484 aa20.3■□□□□ 0.84
GTF3C2-209ENST00000470115 APOBEC3HQ6NTF7 200 aaKnown RBP20.3■□□□□ 0.84
GTF3C2-209ENST00000470115 HHIPL2Q6UWX4 724 aa20.3■□□□□ 0.84
GTF3C2-209ENST00000470115 ITPRIPQ8IWB1 547 aa20.3■□□□□ 0.84
GTF3C2-209ENST00000470115 CLMNQ96JQ2 1002 aa20.3■□□□□ 0.84
GTF3C2-209ENST00000470115 TMEM39BQ9GZU3 492 aa20.3■□□□□ 0.84
GTF3C2-209ENST00000470115 DENND2AQ9ULE3 1009 aa20.3■□□□□ 0.84
GTF3C2-209ENST00000470115 A0A1B0GUL7 405 aa20.29■□□□□ 0.84
GTF3C2-209ENST00000470115 SEMA3EO15041 775 aa20.29■□□□□ 0.84
GTF3C2-209ENST00000470115 PRDX5P30044 214 aa20.29■□□□□ 0.84
GTF3C2-209ENST00000470115 TNNI2P48788 182 aa20.29■□□□□ 0.84
GTF3C2-209ENST00000470115 G3BP1Q13283 466 aaKnown RBP eCLIP20.29■□□□□ 0.84
GTF3C2-209ENST00000470115 CDAN1Q8IWY9 1227 aa20.29■□□□□ 0.84
GTF3C2-209ENST00000470115 XAGE2Q96GT9 111 aa20.29■□□□□ 0.84
GTF3C2-209ENST00000470115 TEPSINQ96N21 525 aa20.29■□□□□ 0.84
GTF3C2-209ENST00000470115 MYH13Q9UKX3 1938 aa20.29■□□□□ 0.84
GTF3C2-209ENST00000470115 CASP8AP2Q9UKL3 1982 aa20.28■□□□□ 0.84
GTF3C2-209ENST00000470115 AKAP11Q9UKA4 1901 aa20.28■□□□□ 0.84
GTF3C2-209ENST00000470115 LDHBP07195 334 aaKnown RBP20.28■□□□□ 0.84
GTF3C2-209ENST00000470115 IREB2P48200 963 aaKnown RBP20.28■□□□□ 0.84
GTF3C2-209ENST00000470115 DIXDC1Q155Q3 683 aa20.28■□□□□ 0.84
GTF3C2-209ENST00000470115 SPRYD7Q5W111 196 aa20.28■□□□□ 0.84
GTF3C2-209ENST00000470115 NEUROD6Q96NK8 337 aa20.28■□□□□ 0.84
GTF3C2-209ENST00000470115 C1orf115Q9H7X2 142 aa20.28■□□□□ 0.84
GTF3C2-209ENST00000470115 ZBTB7BO15156 539 aaPredicted RBP20.27■□□□□ 0.84
GTF3C2-209ENST00000470115 TM4SF4P48230 202 aa20.27■□□□□ 0.84
GTF3C2-209ENST00000470115 ATP8B2P98198 1209 aa20.27■□□□□ 0.84
GTF3C2-209ENST00000470115 POLA2Q14181 598 aa20.27■□□□□ 0.84
GTF3C2-209ENST00000470115 TMOD2Q9NZR1 351 aa20.27■□□□□ 0.84
GTF3C2-209ENST00000470115 SALL1Q9NSC2 1324 aa20.27■□□□□ 0.83
GTF3C2-209ENST00000470115 UNCXA6NJT0 531 aa20.26■□□□□ 0.83
GTF3C2-209ENST00000470115 RASGRF1Q13972 1273 aa20.26■□□□□ 0.83
GTF3C2-209ENST00000470115 MVPQ14764 893 aaKnown RBP20.26■□□□□ 0.83
GTF3C2-209ENST00000470115 PANK1Q8TE04 598 aa20.26■□□□□ 0.83
GTF3C2-209ENST00000470115 DAGLAQ9Y4D2 1042 aa20.26■□□□□ 0.83
GTF3C2-209ENST00000470115 ZBTB22O15209 634 aa20.25■□□□□ 0.83
GTF3C2-209ENST00000470115 GORABQ5T7V8 394 aa20.25■□□□□ 0.83
GTF3C2-209ENST00000470115 FKBP1CQ5VVH2 108 aa20.25■□□□□ 0.83
GTF3C2-209ENST00000470115 SSH3Q8TE77 659 aa20.25■□□□□ 0.83
GTF3C2-209ENST00000470115 SREBF2Q12772 1141 aa20.24■□□□□ 0.83
GTF3C2-209ENST00000470115 ANKRD13AQ8IZ07 590 aa20.24■□□□□ 0.83
GTF3C2-209ENST00000470115 ABHD8Q96I13 439 aa20.24■□□□□ 0.83
GTF3C2-209ENST00000470115 WNK4Q96J92 1243 aa20.24■□□□□ 0.83
GTF3C2-209ENST00000470115 TBC1D8O95759 1140 aa20.23■□□□□ 0.83
GTF3C2-209ENST00000470115 CDC42EP5Q6NZY7 148 aa20.23■□□□□ 0.83
GTF3C2-209ENST00000470115 FAM83AQ86UY5 434 aa20.23■□□□□ 0.83
GTF3C2-209ENST00000470115 ABCF2Q9UG63 623 aa20.23■□□□□ 0.83
GTF3C2-209ENST00000470115 SURF6O75683 361 aaKnown RBP20.22■□□□□ 0.83
GTF3C2-209ENST00000470115 ZBTB48P10074 688 aaPredicted RBP20.22■□□□□ 0.83
GTF3C2-209ENST00000470115 GJA5P36382 358 aa20.22■□□□□ 0.83
GTF3C2-209ENST00000470115 OS9Q13438 667 aaPredicted RBP20.22■□□□□ 0.83
GTF3C2-209ENST00000470115 DGKZQ13574 1117 aa20.22■□□□□ 0.83
GTF3C2-209ENST00000470115 ZGPATQ8N5A5 531 aaKnown RBP20.22■□□□□ 0.83
GTF3C2-209ENST00000470115 MCOLN1Q9GZU1 580 aa20.22■□□□□ 0.83
GTF3C2-209ENST00000470115 ELP3Q9H9T3 547 aa20.22■□□□□ 0.83
GTF3C2-209ENST00000470115 PDS5AQ29RF7 1337 aaKnown RBP20.22■□□□□ 0.83
GTF3C2-209ENST00000470115 MANSC4A6NHS7 340 aaPredicted RBP20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms