RNA–Protein interactions for RNA: ENST00000469670.1

TTC28-205, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-205ENST00000469670 OTUD5Q96G74 571 aa23.22■■□□□ 1.31
TTC28-205ENST00000469670 TMEM39BQ9GZU3 492 aa23.22■■□□□ 1.31
TTC28-205ENST00000469670 CSADQ9Y600 493 aa23.22■■□□□ 1.31
TTC28-205ENST00000469670 TNNI2P48788 182 aa23.21■■□□□ 1.31
TTC28-205ENST00000469670 LMBR1LQ6UX01 489 aa23.21■■□□□ 1.31
TTC28-205ENST00000469670 LDHAL6AQ6ZMR3 332 aa23.21■■□□□ 1.31
TTC28-205ENST00000469670 TDRD7Q8NHU6 1098 aaKnown RBP23.21■■□□□ 1.31
TTC28-205ENST00000469670 SH3TC2Q8TF17 1288 aa23.21■■□□□ 1.31
TTC28-205ENST00000469670 ZNF594Q96JF6 807 aaPredicted RBP23.21■■□□□ 1.31
TTC28-205ENST00000469670 CNNM1Q9NRU3 951 aa23.21■■□□□ 1.31
TTC28-205ENST00000469670 WDHD1O75717 1129 aaPredicted RBP23.2■■□□□ 1.3
TTC28-205ENST00000469670 CCDC57Q2TAC2 916 aa23.2■■□□□ 1.3
TTC28-205ENST00000469670 TAF7LQ5H9L4 462 aa23.2■■□□□ 1.3
TTC28-205ENST00000469670 ARHGAP39Q9C0H5 1083 aa23.2■■□□□ 1.3
TTC28-205ENST00000469670 TLR2O60603 784 aa23.19■■□□□ 1.3
TTC28-205ENST00000469670 CRKP46108 304 aa23.19■■□□□ 1.3
TTC28-205ENST00000469670 KIF22Q14807 665 aa23.19■■□□□ 1.3
TTC28-205ENST00000469670 A0A1B0GUL6 1792 aa23.19■■□□□ 1.3
TTC28-205ENST00000469670 SPDYE5A6NIY4 337 aa23.18■■□□□ 1.3
TTC28-205ENST00000469670 HIBADHP31937 336 aaKnown RBP23.18■■□□□ 1.3
TTC28-205ENST00000469670 GYG1P46976 350 aa23.18■■□□□ 1.3
TTC28-205ENST00000469670 LACTBP83111 547 aaPredicted RBP23.18■■□□□ 1.3
TTC28-205ENST00000469670 CCDC27Q2M243 656 aa23.18■■□□□ 1.3
TTC28-205ENST00000469670 EPHA10Q5JZY3 1008 aa23.18■■□□□ 1.3
TTC28-205ENST00000469670 WWC1Q8IX03 1113 aa23.18■■□□□ 1.3
TTC28-205ENST00000469670 CETPP11597 493 aa23.17■■□□□ 1.3
TTC28-205ENST00000469670 UBE4AQ14139 1066 aa23.17■■□□□ 1.3
TTC28-205ENST00000469670 BEND3Q5T5X7 828 aa23.16■■□□□ 1.3
TTC28-205ENST00000469670 FAM84BQ96KN1 310 aaPredicted RBP23.16■■□□□ 1.3
TTC28-205ENST00000469670 ZCCHC17Q9NP64 241 aaKnown RBP23.16■■□□□ 1.3
TTC28-205ENST00000469670 SNCAIPQ9Y6H5 919 aa23.16■■□□□ 1.3
TTC28-205ENST00000469670 BTBD19C9JJ37 291 aa23.15■■□□□ 1.3
TTC28-205ENST00000469670 F6X3S4 739 aa23.15■■□□□ 1.3
TTC28-205ENST00000469670 GNRH1P01148 92 aa23.15■■□□□ 1.3
TTC28-205ENST00000469670 PRMT2P55345 433 aa23.15■■□□□ 1.3
TTC28-205ENST00000469670 CHRDL2Q6WN34 429 aa23.15■■□□□ 1.3
TTC28-205ENST00000469670 ERO1BQ86YB8 467 aa23.15■■□□□ 1.3
TTC28-205ENST00000469670 IL16Q14005 1332 aa23.14■■□□□ 1.3
TTC28-205ENST00000469670 CACNB3P54284 484 aa23.13■■□□□ 1.29
TTC28-205ENST00000469670 SNAPC2Q13487 334 aa23.13■■□□□ 1.29
TTC28-205ENST00000469670 GRIK5Q16478 980 aa23.13■■□□□ 1.29
TTC28-205ENST00000469670 WRNIP1Q96S55 665 aa23.13■■□□□ 1.29
TTC28-205ENST00000469670 TRIOBPQ9H2D6 2365 aa23.12■■□□□ 1.29
TTC28-205ENST00000469670 GRM8O00222 908 aa23.12■■□□□ 1.29
TTC28-205ENST00000469670 IRF6O14896 467 aa23.12■■□□□ 1.29
TTC28-205ENST00000469670 VAMP4O75379 141 aa23.12■■□□□ 1.29
TTC28-205ENST00000469670 DPF3Q92784 378 aa23.12■■□□□ 1.29
TTC28-205ENST00000469670 ZKSCAN4Q969J2 545 aaPredicted RBP23.12■■□□□ 1.29
TTC28-205ENST00000469670 SHISA4Q96DD7 197 aa23.12■■□□□ 1.29
TTC28-205ENST00000469670 CEP290O15078 2479 aa23.11■■□□□ 1.29
TTC28-205ENST00000469670 FANCIQ9NVI1 1328 aa23.11■■□□□ 1.29
TTC28-205ENST00000469670 ARAP2Q8WZ64 1704 aa23.11■■□□□ 1.29
TTC28-205ENST00000469670 ECM2O94769 699 aaPredicted RBP23.11■■□□□ 1.29
TTC28-205ENST00000469670 HDLBPQ00341 1268 aaKnown RBP23.11■■□□□ 1.29
TTC28-205ENST00000469670 PPIL2Q13356 520 aa23.11■■□□□ 1.29
TTC28-205ENST00000469670 MTFR1Q15390 333 aa23.11■■□□□ 1.29
TTC28-205ENST00000469670 CHAF1AQ13111 956 aaPredicted RBP23.1■■□□□ 1.29
TTC28-205ENST00000469670 C17orf99Q6UX52 265 aa23.1■■□□□ 1.29
TTC28-205ENST00000469670 TEKT1Q969V4 418 aa23.1■■□□□ 1.29
TTC28-205ENST00000469670 PUS3Q9BZE2 481 aaKnown RBP23.1■■□□□ 1.29
TTC28-205ENST00000469670 RBM27Q9P2N5 1060 aaKnown RBP23.1■■□□□ 1.29
TTC28-205ENST00000469670 IQSEC3Q9UPP2 1182 aaPredicted RBP23.1■■□□□ 1.29
TTC28-205ENST00000469670 ZSWIM8A7E2V4 1837 aa23.1■■□□□ 1.29
TTC28-205ENST00000469670 VPS37DQ86XT2 251 aa23.09■■□□□ 1.29
TTC28-205ENST00000469670 HOOK2Q96ED9 719 aa23.09■■□□□ 1.29
TTC28-205ENST00000469670 C9orf78Q9NZ63 289 aaPredicted RBP23.09■■□□□ 1.29
TTC28-205ENST00000469670 TMOD2Q9NZR1 351 aa23.09■■□□□ 1.29
TTC28-205ENST00000469670 SRRDQ9UH36 339 aa23.09■■□□□ 1.29
TTC28-205ENST00000469670 CPA4Q9UI42 421 aa23.09■■□□□ 1.29
TTC28-205ENST00000469670 CTGFP29279 349 aa23.08■■□□□ 1.29
TTC28-205ENST00000469670 PSMC4P43686 418 aa23.08■■□□□ 1.29
TTC28-205ENST00000469670 FBXO33Q7Z6M2 555 aa23.08■■□□□ 1.29
TTC28-205ENST00000469670 FAM83AQ86UY5 434 aa23.08■■□□□ 1.29
TTC28-205ENST00000469670 NKX2-3Q8TAU0 364 aa23.08■■□□□ 1.29
TTC28-205ENST00000469670 TBC1D22AQ8WUA7 517 aa23.08■■□□□ 1.29
TTC28-205ENST00000469670 SZT2Q5T011 3432 aa23.08■■□□□ 1.28
TTC28-205ENST00000469670 FRAT2O75474 233 aaPredicted RBP23.07■■□□□ 1.28
TTC28-205ENST00000469670 HOXD10P28358 340 aa23.07■■□□□ 1.28
TTC28-205ENST00000469670 PPATQ06203 517 aa23.07■■□□□ 1.28
TTC28-205ENST00000469670 TRIM47Q96LD4 638 aa23.07■■□□□ 1.28
TTC28-205ENST00000469670 ZDHHC15Q96MV8 337 aa23.07■■□□□ 1.28
TTC28-205ENST00000469670 RIPOR2Q9Y4F9 1068 aa23.07■■□□□ 1.28
TTC28-205ENST00000469670 MROH5Q6ZUA9 1318 aa23.07■■□□□ 1.28
TTC28-205ENST00000469670 OSBPP22059 807 aa23.06■■□□□ 1.28
TTC28-205ENST00000469670 GRK4P32298 578 aa23.06■■□□□ 1.28
TTC28-205ENST00000469670 FKBP1CQ5VVH2 108 aa23.06■■□□□ 1.28
TTC28-205ENST00000469670 DCAF15Q66K64 600 aa23.06■■□□□ 1.28
TTC28-205ENST00000469670 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.06■■□□□ 1.28
TTC28-205ENST00000469670 RAET1EQ8TD07 263 aa23.06■■□□□ 1.28
TTC28-205ENST00000469670 FMNL1O95466 1100 aaPredicted RBP23.05■■□□□ 1.28
TTC28-205ENST00000469670 GJA8P48165 433 aa23.05■■□□□ 1.28
TTC28-205ENST00000469670 EXOSC9Q06265 439 aaKnown RBP23.05■■□□□ 1.28
TTC28-205ENST00000469670 CAVIN4Q5BKX8 364 aa23.05■■□□□ 1.28
TTC28-205ENST00000469670 APOBEC3HQ6NTF7 200 aaKnown RBP23.05■■□□□ 1.28
TTC28-205ENST00000469670 ANKRD23Q86SG2 305 aa23.05■■□□□ 1.28
TTC28-205ENST00000469670 HTATIP2Q9BUP3 242 aa23.05■■□□□ 1.28
TTC28-205ENST00000469670 MRIQ9BWK5 157 aa23.05■■□□□ 1.28
TTC28-205ENST00000469670 ZNF341Q9BYN7 854 aa23.05■■□□□ 1.28
TTC28-205ENST00000469670 PDHXO00330 501 aa23.04■■□□□ 1.28
TTC28-205ENST00000469670 ALDH1L1O75891 902 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms