RNA–Protein interactions for RNA: ENST00000469400.1

TRAPPC12-216, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-216ENST00000469400 LDHAL6AQ6ZMR3 332 aa16.31■□□□□ 0.2
TRAPPC12-216ENST00000469400 WWC1Q8IX03 1113 aa16.31■□□□□ 0.2
TRAPPC12-216ENST00000469400 DZIP1LQ8IYY4 767 aaKnown RBP16.31■□□□□ 0.2
TRAPPC12-216ENST00000469400 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.31■□□□□ 0.2
TRAPPC12-216ENST00000469400 TDRD7Q8NHU6 1098 aaKnown RBP16.31■□□□□ 0.2
TRAPPC12-216ENST00000469400 TMEM39BQ9GZU3 492 aa16.31■□□□□ 0.2
TRAPPC12-216ENST00000469400 CCDC57Q2TAC2 916 aa16.3■□□□□ 0.2
TRAPPC12-216ENST00000469400 TAF7LQ5H9L4 462 aa16.3■□□□□ 0.2
TRAPPC12-216ENST00000469400 EPHA10Q5JZY3 1008 aa16.3■□□□□ 0.2
TRAPPC12-216ENST00000469400 OTUD5Q96G74 571 aa16.3■□□□□ 0.2
TRAPPC12-216ENST00000469400 CNNM1Q9NRU3 951 aa16.3■□□□□ 0.2
TRAPPC12-216ENST00000469400 TRIOBPQ9H2D6 2365 aa16.29■□□□□ 0.2
TRAPPC12-216ENST00000469400 GYG1P46976 350 aa16.29■□□□□ 0.2
TRAPPC12-216ENST00000469400 BEND3Q5T5X7 828 aa16.29■□□□□ 0.2
TRAPPC12-216ENST00000469400 ARHGAP39Q9C0H5 1083 aa16.29■□□□□ 0.2
TRAPPC12-216ENST00000469400 CSADQ9Y600 493 aa16.29■□□□□ 0.2
TRAPPC12-216ENST00000469400 OTOFQ9HC10 1997 aa16.29■□□□□ 0.2
TRAPPC12-216ENST00000469400 F6X3S4 739 aa16.28■□□□□ 0.2
TRAPPC12-216ENST00000469400 H0YGN5 161 aa16.28■□□□□ 0.2
TRAPPC12-216ENST00000469400 TLR2O60603 784 aa16.28■□□□□ 0.2
TRAPPC12-216ENST00000469400 HIBADHP31937 336 aaKnown RBP16.28■□□□□ 0.2
TRAPPC12-216ENST00000469400 CRKP46108 304 aa16.28■□□□□ 0.2
TRAPPC12-216ENST00000469400 TNNI2P48788 182 aa16.28■□□□□ 0.2
TRAPPC12-216ENST00000469400 SH3TC2Q8TF17 1288 aa16.28■□□□□ 0.2
TRAPPC12-216ENST00000469400 FAM84BQ96KN1 310 aaPredicted RBP16.28■□□□□ 0.2
TRAPPC12-216ENST00000469400 IL16Q14005 1332 aa16.27■□□□□ 0.2
TRAPPC12-216ENST00000469400 SPDYE5A6NIY4 337 aa16.27■□□□□ 0.2
TRAPPC12-216ENST00000469400 VAMP4O75379 141 aa16.27■□□□□ 0.2
TRAPPC12-216ENST00000469400 WDHD1O75717 1129 aaPredicted RBP16.27■□□□□ 0.2
TRAPPC12-216ENST00000469400 LACTBP83111 547 aaPredicted RBP16.27■□□□□ 0.2
TRAPPC12-216ENST00000469400 UBE4AQ14139 1066 aa16.27■□□□□ 0.2
TRAPPC12-216ENST00000469400 A0A1B0GUL6 1792 aa16.27■□□□□ 0.2
TRAPPC12-216ENST00000469400 FANCIQ9NVI1 1328 aa16.26■□□□□ 0.19
TRAPPC12-216ENST00000469400 BTBD19C9JJ37 291 aa16.26■□□□□ 0.19
TRAPPC12-216ENST00000469400 CETPP11597 493 aa16.26■□□□□ 0.19
TRAPPC12-216ENST00000469400 KIF22Q14807 665 aa16.26■□□□□ 0.19
TRAPPC12-216ENST00000469400 GRIK5Q16478 980 aa16.26■□□□□ 0.19
TRAPPC12-216ENST00000469400 SNCAIPQ9Y6H5 919 aa16.26■□□□□ 0.19
TRAPPC12-216ENST00000469400 GRM8O00222 908 aa16.25■□□□□ 0.19
TRAPPC12-216ENST00000469400 CACNB3P54284 484 aa16.25■□□□□ 0.19
TRAPPC12-216ENST00000469400 ERO1BQ86YB8 467 aa16.25■□□□□ 0.19
TRAPPC12-216ENST00000469400 PUS3Q9BZE2 481 aaKnown RBP16.25■□□□□ 0.19
TRAPPC12-216ENST00000469400 ZCCHC17Q9NP64 241 aaKnown RBP16.25■□□□□ 0.19
TRAPPC12-216ENST00000469400 IRF6O14896 467 aa16.24■□□□□ 0.19
TRAPPC12-216ENST00000469400 GNRH1P01148 92 aa16.24■□□□□ 0.19
TRAPPC12-216ENST00000469400 SNAPC2Q13487 334 aa16.24■□□□□ 0.19
TRAPPC12-216ENST00000469400 ZKSCAN4Q969J2 545 aaPredicted RBP16.24■□□□□ 0.19
TRAPPC12-216ENST00000469400 WRNIP1Q96S55 665 aa16.24■□□□□ 0.19
TRAPPC12-216ENST00000469400 ECM2O94769 699 aaPredicted RBP16.23■□□□□ 0.19
TRAPPC12-216ENST00000469400 PRMT2P55345 433 aa16.23■□□□□ 0.19
TRAPPC12-216ENST00000469400 HDLBPQ00341 1268 aaKnown RBP16.23■□□□□ 0.19
TRAPPC12-216ENST00000469400 CCDC184Q52MB2 194 aa16.23■□□□□ 0.19
TRAPPC12-216ENST00000469400 CHRDL2Q6WN34 429 aa16.23■□□□□ 0.19
TRAPPC12-216ENST00000469400 FBXO33Q7Z6M2 555 aa16.23■□□□□ 0.19
TRAPPC12-216ENST00000469400 C9orf78Q9NZ63 289 aaPredicted RBP16.23■□□□□ 0.19
TRAPPC12-216ENST00000469400 IQSEC3Q9UPP2 1182 aaPredicted RBP16.23■□□□□ 0.19
TRAPPC12-216ENST00000469400 SZT2Q5T011 3432 aa16.23■□□□□ 0.19
TRAPPC12-216ENST00000469400 EXOSC9Q06265 439 aaKnown RBP16.22■□□□□ 0.19
TRAPPC12-216ENST00000469400 CHAF1AQ13111 956 aaPredicted RBP16.22■□□□□ 0.19
TRAPPC12-216ENST00000469400 PPIL2Q13356 520 aa16.22■□□□□ 0.19
TRAPPC12-216ENST00000469400 MTFR1Q15390 333 aa16.22■□□□□ 0.19
TRAPPC12-216ENST00000469400 C17orf99Q6UX52 265 aa16.22■□□□□ 0.19
TRAPPC12-216ENST00000469400 VPS37DQ86XT2 251 aa16.22■□□□□ 0.19
TRAPPC12-216ENST00000469400 TEKT1Q969V4 418 aa16.22■□□□□ 0.19
TRAPPC12-216ENST00000469400 SHISA4Q96DD7 197 aa16.22■□□□□ 0.19
TRAPPC12-216ENST00000469400 RIPOR2Q9Y4F9 1068 aa16.22■□□□□ 0.19
TRAPPC12-216ENST00000469400 CTGFP29279 349 aa16.21■□□□□ 0.19
TRAPPC12-216ENST00000469400 NCBP3Q53F19 620 aaKnown RBP16.21■□□□□ 0.19
TRAPPC12-216ENST00000469400 FAM83AQ86UY5 434 aa16.21■□□□□ 0.19
TRAPPC12-216ENST00000469400 TBC1D22AQ8WUA7 517 aa16.21■□□□□ 0.19
TRAPPC12-216ENST00000469400 DPF3Q92784 378 aa16.21■□□□□ 0.19
TRAPPC12-216ENST00000469400 ZDHHC15Q96MV8 337 aa16.21■□□□□ 0.19
TRAPPC12-216ENST00000469400 CPA4Q9UI42 421 aa16.21■□□□□ 0.19
TRAPPC12-216ENST00000469400 ARAP2Q8WZ64 1704 aa16.21■□□□□ 0.19
TRAPPC12-216ENST00000469400 MROH5Q6ZUA9 1318 aa16.2■□□□□ 0.18
TRAPPC12-216ENST00000469400 ZSWIM8A7E2V4 1837 aa16.2■□□□□ 0.18
TRAPPC12-216ENST00000469400 FKBP1CQ5VVH2 108 aa16.2■□□□□ 0.18
TRAPPC12-216ENST00000469400 APOBEC3HQ6NTF7 200 aaKnown RBP16.2■□□□□ 0.18
TRAPPC12-216ENST00000469400 HOOK2Q96ED9 719 aa16.2■□□□□ 0.18
TRAPPC12-216ENST00000469400 KAZALD1Q96I82 304 aa16.2■□□□□ 0.18
TRAPPC12-216ENST00000469400 SUCLG2Q96I99 432 aa16.2■□□□□ 0.18
TRAPPC12-216ENST00000469400 TRIM47Q96LD4 638 aa16.2■□□□□ 0.18
TRAPPC12-216ENST00000469400 MRIQ9BWK5 157 aa16.2■□□□□ 0.18
TRAPPC12-216ENST00000469400 TMOD2Q9NZR1 351 aa16.2■□□□□ 0.18
TRAPPC12-216ENST00000469400 RBM27Q9P2N5 1060 aaKnown RBP16.2■□□□□ 0.18
TRAPPC12-216ENST00000469400 SRRDQ9UH36 339 aa16.2■□□□□ 0.18
TRAPPC12-216ENST00000469400 CACNA1FO60840 1977 aa16.2■□□□□ 0.18
TRAPPC12-216ENST00000469400 FRAT2O75474 233 aaPredicted RBP16.19■□□□□ 0.18
TRAPPC12-216ENST00000469400 ALDH1L1O75891 902 aa16.19■□□□□ 0.18
TRAPPC12-216ENST00000469400 PSMC4P43686 418 aa16.19■□□□□ 0.18
TRAPPC12-216ENST00000469400 PPATQ06203 517 aa16.19■□□□□ 0.18
TRAPPC12-216ENST00000469400 CAVIN4Q5BKX8 364 aa16.19■□□□□ 0.18
TRAPPC12-216ENST00000469400 MIGA2Q7L4E1 593 aa16.19■□□□□ 0.18
TRAPPC12-216ENST00000469400 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.19■□□□□ 0.18
TRAPPC12-216ENST00000469400 RANBP2P49792 3224 aaKnown RBP16.19■□□□□ 0.18
TRAPPC12-216ENST00000469400 PDHXO00330 501 aa16.18■□□□□ 0.18
TRAPPC12-216ENST00000469400 OSBPP22059 807 aa16.18■□□□□ 0.18
TRAPPC12-216ENST00000469400 HOXD10P28358 340 aa16.18■□□□□ 0.18
TRAPPC12-216ENST00000469400 INPP5BP32019 993 aa16.18■□□□□ 0.18
TRAPPC12-216ENST00000469400 DCAF15Q66K64 600 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms