RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 ZAP70P43403 619 aa9.9□□□□□ -0.82
NPHP3-204ENST00000469232 KCNJ4P48050 445 aa9.9□□□□□ -0.82
NPHP3-204ENST00000469232 KIAA2012Q0VF49 1180 aa9.9□□□□□ -0.82
NPHP3-204ENST00000469232 DALRD3Q5D0E6 543 aaKnown RBP9.9□□□□□ -0.82
NPHP3-204ENST00000469232 ZNF804AQ7Z570 1209 aa9.9□□□□□ -0.82
NPHP3-204ENST00000469232 MICALL2Q8IY33 904 aa9.9□□□□□ -0.82
NPHP3-204ENST00000469232 HS6ST3Q8IZP7 471 aa9.9□□□□□ -0.82
NPHP3-204ENST00000469232 SUPT20HQ8NEM7 779 aa9.9□□□□□ -0.82
NPHP3-204ENST00000469232 COA1Q9GZY4 146 aa9.9□□□□□ -0.82
NPHP3-204ENST00000469232 CD209Q9NNX6 404 aa9.9□□□□□ -0.82
NPHP3-204ENST00000469232 HIP1O00291 1037 aa9.89□□□□□ -0.83
NPHP3-204ENST00000469232 EIF5BO60841 1220 aaKnown RBP9.89□□□□□ -0.83
NPHP3-204ENST00000469232 TTF1Q15361 905 aaPredicted RBP9.89□□□□□ -0.83
NPHP3-204ENST00000469232 PI16Q6UXB8 463 aa9.89□□□□□ -0.83
NPHP3-204ENST00000469232 NLGN2Q8NFZ4 835 aa9.89□□□□□ -0.83
NPHP3-204ENST00000469232 EDC3Q96F86 508 aaKnown RBP9.89□□□□□ -0.83
NPHP3-204ENST00000469232 EYA3Q99504 573 aa9.89□□□□□ -0.83
NPHP3-204ENST00000469232 ANTXR1Q9H6X2 564 aa9.89□□□□□ -0.83
NPHP3-204ENST00000469232 C21orf2O43822 256 aa9.89□□□□□ -0.83
NPHP3-204ENST00000469232 ZFYP08048 801 aaPredicted RBP9.89□□□□□ -0.83
NPHP3-204ENST00000469232 FKBP1AP62942 108 aaKnown RBP9.89□□□□□ -0.83
NPHP3-204ENST00000469232 FKBP4Q02790 459 aaKnown RBP eCLIP9.89□□□□□ -0.83
NPHP3-204ENST00000469232 PODNQ7Z5L7 613 aa9.89□□□□□ -0.83
NPHP3-204ENST00000469232 FHDC1Q9C0D6 1143 aaPredicted RBP9.89□□□□□ -0.83
NPHP3-204ENST00000469232 TMX4Q9H1E5 349 aaPredicted RBP9.89□□□□□ -0.83
NPHP3-204ENST00000469232 CHD4Q14839 1912 aa9.88□□□□□ -0.83
NPHP3-204ENST00000469232 PSME4Q14997 1843 aa9.88□□□□□ -0.83
NPHP3-204ENST00000469232 RAD50Q92878 1312 aa9.88□□□□□ -0.83
NPHP3-204ENST00000469232 MYH7P12883 1935 aa9.88□□□□□ -0.83
NPHP3-204ENST00000469232 TCRBV5S4A2TA0A5A2 114 aa9.88□□□□□ -0.83
NPHP3-204ENST00000469232 POTEMA6NI47 508 aa9.88□□□□□ -0.83
NPHP3-204ENST00000469232 C6orf229H3BNL8 230 aa9.88□□□□□ -0.83
NPHP3-204ENST00000469232 GOLIM4O00461 696 aa9.88□□□□□ -0.83
NPHP3-204ENST00000469232 SGSM2O43147 1006 aa9.88□□□□□ -0.83
NPHP3-204ENST00000469232 UBE3CQ15386 1083 aa9.88□□□□□ -0.83
NPHP3-204ENST00000469232 WASHC4Q2M389 1173 aa9.88□□□□□ -0.83
NPHP3-204ENST00000469232 ZMYM1Q5SVZ6 1142 aa9.88□□□□□ -0.83
NPHP3-204ENST00000469232 ESYT1Q9BSJ8 1104 aa9.88□□□□□ -0.83
NPHP3-204ENST00000469232 SYT17Q9BSW7 474 aa9.88□□□□□ -0.83
NPHP3-204ENST00000469232 ZC3H12CQ9C0D7 883 aaKnown RBP9.88□□□□□ -0.83
NPHP3-204ENST00000469232 PIH1D3Q9NQM4 214 aaKnown RBP9.88□□□□□ -0.83
NPHP3-204ENST00000469232 MYH13Q9UKX3 1938 aa9.87□□□□□ -0.83
NPHP3-204ENST00000469232 COL4A5P29400 1685 aa9.87□□□□□ -0.83
NPHP3-204ENST00000469232 TRIM6-TRIM34B2RNG4 842 aa9.87□□□□□ -0.83
NPHP3-204ENST00000469232 NFKBIEO00221 500 aa9.87□□□□□ -0.83
NPHP3-204ENST00000469232 MAP4K4O95819 1239 aaPredicted RBP9.87□□□□□ -0.83
NPHP3-204ENST00000469232 ADD2P35612 726 aa9.87□□□□□ -0.83
NPHP3-204ENST00000469232 POTEGQ6S5H5 508 aa9.87□□□□□ -0.83
NPHP3-204ENST00000469232 WDR66Q8TBY9 1149 aa9.87□□□□□ -0.83
NPHP3-204ENST00000469232 RILPL2Q969X0 211 aa9.87□□□□□ -0.83
NPHP3-204ENST00000469232 IL17RAQ96F46 866 aa9.87□□□□□ -0.83
NPHP3-204ENST00000469232 GPR101Q96P66 508 aaPredicted RBP9.87□□□□□ -0.83
NPHP3-204ENST00000469232 DNAJC2Q99543 621 aaKnown RBP9.87□□□□□ -0.83
NPHP3-204ENST00000469232 SUGT1Q9Y2Z0 365 aa9.87□□□□□ -0.83
NPHP3-204ENST00000469232 NDUFB9Q9Y6M9 179 aa9.87□□□□□ -0.83
NPHP3-204ENST00000469232 MYO5AQ9Y4I1 1855 aaKnown RBP9.87□□□□□ -0.83
NPHP3-204ENST00000469232 MAST2Q6P0Q8 1798 aa9.86□□□□□ -0.83
NPHP3-204ENST00000469232 RNF113AO15541 343 aaKnown RBP9.86□□□□□ -0.83
NPHP3-204ENST00000469232 LRRFIP1Q32MZ4 808 aaKnown RBP9.86□□□□□ -0.83
NPHP3-204ENST00000469232 VPS37DQ86XT2 251 aa9.86□□□□□ -0.83
NPHP3-204ENST00000469232 ZGPATQ8N5A5 531 aaKnown RBP9.86□□□□□ -0.83
NPHP3-204ENST00000469232 ZNF384Q8TF68 577 aa9.86□□□□□ -0.83
NPHP3-204ENST00000469232 FSD1Q9BTV5 496 aa9.86□□□□□ -0.83
NPHP3-204ENST00000469232 IL25Q9H293 177 aa9.86□□□□□ -0.83
NPHP3-204ENST00000469232 HELLSQ9NRZ9 838 aa9.86□□□□□ -0.83
NPHP3-204ENST00000469232 SCN9AQ15858 1988 aa9.86□□□□□ -0.83
NPHP3-204ENST00000469232 SNPHO15079 494 aa9.85□□□□□ -0.83
NPHP3-204ENST00000469232 ZSCAN25Q6NSZ9 544 aa9.85□□□□□ -0.83
NPHP3-204ENST00000469232 TBC1D22AQ8WUA7 517 aa9.85□□□□□ -0.83
NPHP3-204ENST00000469232 MRIQ9BWK5 157 aa9.85□□□□□ -0.83
NPHP3-204ENST00000469232 BCL11AQ9H165 835 aa9.85□□□□□ -0.83
NPHP3-204ENST00000469232 A0A0D9SFI3 127 aa9.85□□□□□ -0.83
NPHP3-204ENST00000469232 PDE6AP16499 860 aa9.85□□□□□ -0.83
NPHP3-204ENST00000469232 MAP3K12Q12852 859 aa9.85□□□□□ -0.83
NPHP3-204ENST00000469232 NMIQ13287 307 aaPredicted RBP9.85□□□□□ -0.83
NPHP3-204ENST00000469232 STRIP1Q5VSL9 837 aa9.85□□□□□ -0.83
NPHP3-204ENST00000469232 CASC1Q6TDU7 716 aa9.85□□□□□ -0.83
NPHP3-204ENST00000469232 RUFY2Q8WXA3 655 aa9.85□□□□□ -0.83
NPHP3-204ENST00000469232 APPBP2Q92624 585 aa9.85□□□□□ -0.83
NPHP3-204ENST00000469232 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.85□□□□□ -0.831e-8■■■■■ 50
NPHP3-204ENST00000469232 YDJCA8MPS7 323 aa9.84□□□□□ -0.83
NPHP3-204ENST00000469232 ST18O60284 1047 aa9.84□□□□□ -0.83
NPHP3-204ENST00000469232 PRELPP51888 382 aa9.84□□□□□ -0.83
NPHP3-204ENST00000469232 DACT2Q5SW24 774 aa9.84□□□□□ -0.83
NPHP3-204ENST00000469232 SPTY2D1Q68D10 685 aaPredicted RBP9.84□□□□□ -0.83
NPHP3-204ENST00000469232 KCNB2Q92953 911 aa9.84□□□□□ -0.83
NPHP3-204ENST00000469232 OSBP2Q969R2 916 aa9.84□□□□□ -0.83
NPHP3-204ENST00000469232 NSUN4Q96CB9 384 aaKnown RBP9.84□□□□□ -0.83
NPHP3-204ENST00000469232 FAM227BQ96M60 508 aa9.84□□□□□ -0.83
NPHP3-204ENST00000469232 USP26Q9BXU7 913 aa9.84□□□□□ -0.83
NPHP3-204ENST00000469232 LSG1Q9H089 658 aaKnown RBP9.84□□□□□ -0.83
NPHP3-204ENST00000469232 TAOK3Q9H2K8 898 aa9.84□□□□□ -0.83
NPHP3-204ENST00000469232 DIAPH3Q9NSV4 1193 aa9.84□□□□□ -0.83
NPHP3-204ENST00000469232 WWC3Q9ULE0 1092 aa9.84□□□□□ -0.83
NPHP3-204ENST00000469232 IQSEC3Q9UPP2 1182 aaPredicted RBP9.84□□□□□ -0.83
NPHP3-204ENST00000469232 RIMBP2O15034 1052 aa9.83□□□□□ -0.84
NPHP3-204ENST00000469232 ECE2O60344 883 aa9.83□□□□□ -0.84
NPHP3-204ENST00000469232 REC8O95072 547 aa9.83□□□□□ -0.84
NPHP3-204ENST00000469232 CHGBP05060 677 aa9.83□□□□□ -0.84
NPHP3-204ENST00000469232 IARSP41252 1262 aaKnown RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms