RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 ANKRD13AQ8IZ07 590 aa15.48■□□□□ 0.07
HDAC3-204ENST00000469207 CD99L2Q8TCZ2 262 aa15.48■□□□□ 0.07
HDAC3-204ENST00000469207 SERPINA10Q9UK55 444 aa15.48■□□□□ 0.07
HDAC3-204ENST00000469207 UTYO14607 1347 aa15.47■□□□□ 0.07
HDAC3-204ENST00000469207 CRHR2Q13324 411 aa15.47■□□□□ 0.07
HDAC3-204ENST00000469207 METTL24Q5JXM2 366 aa15.47■□□□□ 0.07
HDAC3-204ENST00000469207 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.47■□□□□ 0.07
HDAC3-204ENST00000469207 OPTNQ96CV9 577 aa15.47■□□□□ 0.07
HDAC3-204ENST00000469207 ECM29Q5VYK3 1845 aa15.47■□□□□ 0.07
HDAC3-204ENST00000469207 PDE4DIPQ5VU43 2346 aa15.46■□□□□ 0.07
HDAC3-204ENST00000469207 ZNF521Q96K83 1311 aa15.46■□□□□ 0.07
HDAC3-204ENST00000469207 POTEFA5A3E0 1075 aa15.46■□□□□ 0.07
HDAC3-204ENST00000469207 RABL6Q3YEC7 729 aaPredicted RBP15.46■□□□□ 0.07
HDAC3-204ENST00000469207 VPS37DQ86XT2 251 aa15.46■□□□□ 0.07
HDAC3-204ENST00000469207 MS4A4AQ96JQ5 239 aa15.46■□□□□ 0.07
HDAC3-204ENST00000469207 MROH5Q6ZUA9 1318 aa15.45■□□□□ 0.06
HDAC3-204ENST00000469207 TESPA1A2RU30 521 aaPredicted RBP15.45■□□□□ 0.06
HDAC3-204ENST00000469207 FRAT2O75474 233 aaPredicted RBP15.45■□□□□ 0.06
HDAC3-204ENST00000469207 VGLL2Q8N8G2 317 aa15.45■□□□□ 0.06
HDAC3-204ENST00000469207 SSH1Q8WYL5 1049 aa15.45■□□□□ 0.06
HDAC3-204ENST00000469207 USP44Q9H0E7 712 aa15.45■□□□□ 0.06
HDAC3-204ENST00000469207 UNCXA6NJT0 531 aa15.44■□□□□ 0.06
HDAC3-204ENST00000469207 PDE8BO95263 885 aa15.44■□□□□ 0.06
HDAC3-204ENST00000469207 VGLL4Q14135 290 aa15.44■□□□□ 0.06
HDAC3-204ENST00000469207 PTPN22Q9Y2R2 807 aa15.44■□□□□ 0.06
HDAC3-204ENST00000469207 CENPFP49454 3210 aa15.43■□□□□ 0.06
HDAC3-204ENST00000469207 MAP3K9P80192 1104 aa15.43■□□□□ 0.06
HDAC3-204ENST00000469207 TNFAIP1Q13829 316 aa15.43■□□□□ 0.06
HDAC3-204ENST00000469207 CAVIN4Q5BKX8 364 aa15.43■□□□□ 0.06
HDAC3-204ENST00000469207 BRI3BPQ8WY22 251 aa15.43■□□□□ 0.06
HDAC3-204ENST00000469207 HTTP42858 3142 aa15.43■□□□□ 0.06
HDAC3-204ENST00000469207 SP3Q02447 781 aa15.42■□□□□ 0.06
HDAC3-204ENST00000469207 PRPF38BQ5VTL8 546 aaKnown RBP15.42■□□□□ 0.06
HDAC3-204ENST00000469207 OTUD7BQ6GQQ9 843 aa15.42■□□□□ 0.06
HDAC3-204ENST00000469207 APOBEC3HQ6NTF7 200 aaKnown RBP15.42■□□□□ 0.06
HDAC3-204ENST00000469207 FAM43AQ8N2R8 423 aa15.42■□□□□ 0.06
HDAC3-204ENST00000469207 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.42■□□□□ 0.063e-6■■■□□ 15.8
HDAC3-204ENST00000469207 ZKSCAN4Q969J2 545 aaPredicted RBP15.42■□□□□ 0.06
HDAC3-204ENST00000469207 CDCA7LQ96GN5 454 aa15.42■□□□□ 0.06
HDAC3-204ENST00000469207 CCL15-CCL14A0A0B4J2E2 113 aa15.41■□□□□ 0.06
HDAC3-204ENST00000469207 ECM2O94769 699 aaPredicted RBP15.41■□□□□ 0.06
HDAC3-204ENST00000469207 RFX5P48382 616 aaPredicted RBP15.41■□□□□ 0.06
HDAC3-204ENST00000469207 TNNI2P48788 182 aa15.41■□□□□ 0.06
HDAC3-204ENST00000469207 CCL15Q16663 113 aa15.41■□□□□ 0.06
HDAC3-204ENST00000469207 TEKT1Q969V4 418 aa15.41■□□□□ 0.06
HDAC3-204ENST00000469207 OTUD5Q96G74 571 aa15.41■□□□□ 0.06
HDAC3-204ENST00000469207 ERO1AQ96HE7 468 aa15.41■□□□□ 0.06
HDAC3-204ENST00000469207 EFCC1Q9HA90 598 aa15.41■□□□□ 0.06
HDAC3-204ENST00000469207 OTOFQ9HC10 1997 aa15.41■□□□□ 0.06
HDAC3-204ENST00000469207 MKI67P46013 3256 aaKnown RBP15.41■□□□□ 0.06
HDAC3-204ENST00000469207 EN2P19622 333 aaPredicted RBP15.4■□□□□ 0.06
HDAC3-204ENST00000469207 FGFR2P21802 821 aa15.4■□□□□ 0.06
HDAC3-204ENST00000469207 MIGA2Q7L4E1 593 aa15.4■□□□□ 0.06
HDAC3-204ENST00000469207 HDLBPQ00341 1268 aaKnown RBP15.39■□□□□ 0.05
HDAC3-204ENST00000469207 SLFN5Q08AF3 891 aa15.39■□□□□ 0.05
HDAC3-204ENST00000469207 TAF1CQ15572 869 aaPredicted RBP15.39■□□□□ 0.05
HDAC3-204ENST00000469207 TBC1D22AQ8WUA7 517 aa15.39■□□□□ 0.05
HDAC3-204ENST00000469207 ZDHHC15Q96MV8 337 aa15.39■□□□□ 0.05
HDAC3-204ENST00000469207 CSADQ9Y600 493 aa15.39■□□□□ 0.05
HDAC3-204ENST00000469207 SNCAIPQ9Y6H5 919 aa15.39■□□□□ 0.05
HDAC3-204ENST00000469207 PTPRCP08575 1304 aa15.39■□□□□ 0.05
HDAC3-204ENST00000469207 EYA2O00167 538 aa15.38■□□□□ 0.05
HDAC3-204ENST00000469207 MYCP01106 439 aaPredicted RBP15.38■□□□□ 0.05
HDAC3-204ENST00000469207 ZEB1P37275 1124 aaPredicted RBP15.38■□□□□ 0.05
HDAC3-204ENST00000469207 GTF2A2P52657 109 aa15.38■□□□□ 0.05
HDAC3-204ENST00000469207 ATG9AQ7Z3C6 839 aa15.38■□□□□ 0.05
HDAC3-204ENST00000469207 WRNIP1Q96S55 665 aa15.38■□□□□ 0.05
HDAC3-204ENST00000469207 ARHGAP39Q9C0H5 1083 aa15.38■□□□□ 0.05
HDAC3-204ENST00000469207 SIL1Q9H173 461 aa15.38■□□□□ 0.05
HDAC3-204ENST00000469207 ZFYVE28Q9HCC9 887 aa15.38■□□□□ 0.05
HDAC3-204ENST00000469207 BRCA2P51587 3418 aa15.38■□□□□ 0.05
HDAC3-204ENST00000469207 LAMB1P07942 1786 aa15.37■□□□□ 0.05
HDAC3-204ENST00000469207 E9PSI1 815 aa15.37■□□□□ 0.05
HDAC3-204ENST00000469207 IRF6O14896 467 aa15.37■□□□□ 0.05
HDAC3-204ENST00000469207 IFIT1P09914 478 aaKnown RBP15.37■□□□□ 0.05
HDAC3-204ENST00000469207 TCP10Q12799 353 aa15.37■□□□□ 0.05
HDAC3-204ENST00000469207 PUM3Q15397 648 aaKnown RBP15.37■□□□□ 0.05
HDAC3-204ENST00000469207 DIXDC1Q155Q3 683 aa15.37■□□□□ 0.05
HDAC3-204ENST00000469207 INTS3Q68E01 1043 aaKnown RBP15.37■□□□□ 0.05
HDAC3-204ENST00000469207 MRIQ9BWK5 157 aa15.37■□□□□ 0.05
HDAC3-204ENST00000469207 PTCH2Q9Y6C5 1203 aa15.37■□□□□ 0.05
HDAC3-204ENST00000469207 SPDYE5A6NIY4 337 aa15.36■□□□□ 0.05
HDAC3-204ENST00000469207 BTBD19C9JJ37 291 aa15.36■□□□□ 0.05
HDAC3-204ENST00000469207 INPP5BP32019 993 aa15.36■□□□□ 0.05
HDAC3-204ENST00000469207 ARAP2Q8WZ64 1704 aa15.36■□□□□ 0.05
HDAC3-204ENST00000469207 SLC5A1P13866 664 aa15.35■□□□□ 0.05
HDAC3-204ENST00000469207 PRDX5P30044 214 aa15.35■□□□□ 0.05
HDAC3-204ENST00000469207 NFIAQ12857 509 aa15.35■□□□□ 0.05
HDAC3-204ENST00000469207 CDC42EP5Q6NZY7 148 aa15.35■□□□□ 0.05
HDAC3-204ENST00000469207 HHIPL2Q6UWX4 724 aa15.35■□□□□ 0.05
HDAC3-204ENST00000469207 FAM83AQ86UY5 434 aa15.35■□□□□ 0.05
HDAC3-204ENST00000469207 ERO1BQ86YB8 467 aa15.35■□□□□ 0.05
HDAC3-204ENST00000469207 ZFPM1Q8IX07 1006 aa15.35■□□□□ 0.05
HDAC3-204ENST00000469207 LPIN2Q92539 896 aa15.35■□□□□ 0.05
HDAC3-204ENST00000469207 ARMC5Q96C12 935 aa15.35■□□□□ 0.05
HDAC3-204ENST00000469207 TMOD2Q9NZR1 351 aa15.35■□□□□ 0.05
HDAC3-204ENST00000469207 PA2G4Q9UQ80 394 aaKnown RBP15.35■□□□□ 0.05
HDAC3-204ENST00000469207 SLURP2P0DP57 97 aa15.34■□□□□ 0.05
HDAC3-204ENST00000469207 SMC4Q9NTJ3 1288 aa15.34■□□□□ 0.05
HDAC3-204ENST00000469207 NOB1Q9ULX3 412 aaKnown RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms