RNA–Protein interactions for RNA: ENST00000469087.1

RUNX1-213, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 1,790 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-213ENST00000469087 KIF2CQ99661 725 aa15.41■□□□□ 0.06
RUNX1-213ENST00000469087 LDHBP07195 334 aaKnown RBP15.41■□□□□ 0.06
RUNX1-213ENST00000469087 NAA16Q6N069 864 aaPredicted RBP15.41■□□□□ 0.06
RUNX1-213ENST00000469087 TBC1D22AQ8WUA7 517 aa15.41■□□□□ 0.06
RUNX1-213ENST00000469087 FER1L6Q2WGJ9 1857 aa15.41■□□□□ 0.06
RUNX1-213ENST00000469087 GPAA1O43292 621 aa15.4■□□□□ 0.06
RUNX1-213ENST00000469087 HSPD1P10809 573 aaKnown RBP15.4■□□□□ 0.06
RUNX1-213ENST00000469087 HSPA4P34932 840 aa15.4■□□□□ 0.06
RUNX1-213ENST00000469087 NECTIN1Q15223 517 aa15.4■□□□□ 0.06
RUNX1-213ENST00000469087 MXD3Q9BW11 206 aa15.4■□□□□ 0.06
RUNX1-213ENST00000469087 VPS33BQ9H267 617 aa15.4■□□□□ 0.06
RUNX1-213ENST00000469087 CCDC88AQ3V6T2 1871 aa15.4■□□□□ 0.06
RUNX1-213ENST00000469087 SCN9AQ15858 1988 aa15.4■□□□□ 0.06
RUNX1-213ENST00000469087 YDJCA8MPS7 323 aa15.39■□□□□ 0.05
RUNX1-213ENST00000469087 NFKBIEO00221 500 aa15.39■□□□□ 0.05
RUNX1-213ENST00000469087 FOXP2O15409 715 aa15.39■□□□□ 0.05
RUNX1-213ENST00000469087 LARGE2Q8N3Y3 721 aa15.39■□□□□ 0.05
RUNX1-213ENST00000469087 CERS5Q8N5B7 392 aa15.39■□□□□ 0.05
RUNX1-213ENST00000469087 MIGA1Q8NAN2 632 aa15.39■□□□□ 0.05
RUNX1-213ENST00000469087 FBXW7Q969H0 707 aa15.39■□□□□ 0.05
RUNX1-213ENST00000469087 STRBPQ96SI9 672 aaKnown RBP15.39■□□□□ 0.05
RUNX1-213ENST00000469087 TAOK3Q9H2K8 898 aa15.39■□□□□ 0.05
RUNX1-213ENST00000469087 PALD1Q9ULE6 856 aa15.39■□□□□ 0.05
RUNX1-213ENST00000469087 RBM8AQ9Y5S9 174 aaKnown RBP15.39■□□□□ 0.05
RUNX1-213ENST00000469087 IGSF3O75054 1194 aa15.39■□□□□ 0.05
RUNX1-213ENST00000469087 DZIP1Q86YF9 867 aaKnown RBP15.39■□□□□ 0.05
RUNX1-213ENST00000469087 AIDAQ96BJ3 306 aa15.39■□□□□ 0.05
RUNX1-213ENST00000469087 DSCC1Q9BVC3 393 aa15.39■□□□□ 0.05
RUNX1-213ENST00000469087 ARFGEF1Q9Y6D6 1849 aa15.38■□□□□ 0.05
RUNX1-213ENST00000469087 COL4A5P29400 1685 aa15.38■□□□□ 0.05
RUNX1-213ENST00000469087 SOCS7O14512 581 aa15.38■□□□□ 0.05
RUNX1-213ENST00000469087 MBD4O95243 580 aa15.38■□□□□ 0.05
RUNX1-213ENST00000469087 IARSP41252 1262 aaKnown RBP15.38■□□□□ 0.05
RUNX1-213ENST00000469087 STRIP1Q5VSL9 837 aa15.38■□□□□ 0.05
RUNX1-213ENST00000469087 ARMT1Q9H993 441 aa15.38■□□□□ 0.05
RUNX1-213ENST00000469087 USP17L3A6NCW0 530 aa15.37■□□□□ 0.05
RUNX1-213ENST00000469087 USP17L4A6NCW7 530 aa15.37■□□□□ 0.05
RUNX1-213ENST00000469087 MCCP23508 829 aa15.37■□□□□ 0.05
RUNX1-213ENST00000469087 DIXDC1Q155Q3 683 aa15.37■□□□□ 0.05
RUNX1-213ENST00000469087 DACT2Q5SW24 774 aa15.37■□□□□ 0.05
RUNX1-213ENST00000469087 TMED8Q6PL24 325 aaPredicted RBP15.37■□□□□ 0.05
RUNX1-213ENST00000469087 USP17L1Q7RTZ2 530 aa15.37■□□□□ 0.05
RUNX1-213ENST00000469087 RASEFQ8IZ41 740 aa15.37■□□□□ 0.05
RUNX1-213ENST00000469087 LCORLQ8N3X6 602 aa15.37■□□□□ 0.05
RUNX1-213ENST00000469087 RIOK1Q9BRS2 568 aaKnown RBP15.37■□□□□ 0.05
RUNX1-213ENST00000469087 MAGEB6P1A0A0J9YX57 407 aa15.36■□□□□ 0.05
RUNX1-213ENST00000469087 DYNLL1P63167 89 aaKnown RBP15.36■□□□□ 0.05
RUNX1-213ENST00000469087 PRKAB2O43741 272 aa15.36■□□□□ 0.05
RUNX1-213ENST00000469087 FGAP02671 866 aa15.36■□□□□ 0.05
RUNX1-213ENST00000469087 PRELPP51888 382 aa15.36■□□□□ 0.05
RUNX1-213ENST00000469087 CREB3L3Q68CJ9 461 aa15.36■□□□□ 0.05
RUNX1-213ENST00000469087 KCNB2Q92953 911 aa15.36■□□□□ 0.05
RUNX1-213ENST00000469087 SUGT1Q9Y2Z0 365 aa15.36■□□□□ 0.05
RUNX1-213ENST00000469087 U3KPZ7 1027 aaPredicted RBP15.36■□□□□ 0.05
RUNX1-213ENST00000469087 LTBP3Q9NS15 1303 aa15.35■□□□□ 0.05
RUNX1-213ENST00000469087 ZNF646O15015 1829 aaPredicted RBP15.35■□□□□ 0.05
RUNX1-213ENST00000469087 PATL2C9JE40 543 aaKnown RBP15.35■□□□□ 0.05
RUNX1-213ENST00000469087 F8W031 263 aaPredicted RBP15.35■□□□□ 0.05
RUNX1-213ENST00000469087 SLC27A2O14975 620 aa15.35■□□□□ 0.05
RUNX1-213ENST00000469087 ANP32AP39687 249 aaKnown RBP15.35■□□□□ 0.05
RUNX1-213ENST00000469087 FKBP1AP62942 108 aaKnown RBP15.35■□□□□ 0.05
RUNX1-213ENST00000469087 GSTO1P78417 241 aa15.35■□□□□ 0.05
RUNX1-213ENST00000469087 RASSF7Q02833 373 aa15.35■□□□□ 0.05
RUNX1-213ENST00000469087 FAM163AQ96GL9 167 aaPredicted RBP15.35■□□□□ 0.05
RUNX1-213ENST00000469087 AATFQ9NY61 560 aaKnown RBP eCLIP15.35■□□□□ 0.05
RUNX1-213ENST00000469087 ZNRF3Q9ULT6 936 aa15.35■□□□□ 0.05
RUNX1-213ENST00000469087 SNX14Q9Y5W7 946 aa15.35■□□□□ 0.05
RUNX1-213ENST00000469087 MYH2Q9UKX2 1941 aa15.35■□□□□ 0.05
RUNX1-213ENST00000469087 GSG1L2A8MUP6 293 aa15.34■□□□□ 0.05
RUNX1-213ENST00000469087 RAD17O75943 681 aa15.34■□□□□ 0.05
RUNX1-213ENST00000469087 LDHCP07864 332 aa15.34■□□□□ 0.05
RUNX1-213ENST00000469087 ANAPC15P60006 121 aa15.34■□□□□ 0.05
RUNX1-213ENST00000469087 NIM1KQ8IY84 436 aa15.34■□□□□ 0.05
RUNX1-213ENST00000469087 IL17RAQ96F46 866 aa15.34■□□□□ 0.05
RUNX1-213ENST00000469087 TTF2Q9UNY4 1162 aaKnown RBP15.34■□□□□ 0.05
RUNX1-213ENST00000469087 TAF6LQ9Y6J9 622 aa15.34■□□□□ 0.05
RUNX1-213ENST00000469087 APPP05067 770 aa15.34■□□□□ 0.05
RUNX1-213ENST00000469087 CYP21A2P08686 494 aa15.34■□□□□ 0.05
RUNX1-213ENST00000469087 ARHGAP27Q6ZUM4 889 aa15.34■□□□□ 0.05
RUNX1-213ENST00000469087 SLC4A4Q9Y6R1 1079 aa15.34■□□□□ 0.05
RUNX1-213ENST00000469087 MAST2Q6P0Q8 1798 aa15.33■□□□□ 0.05
RUNX1-213ENST00000469087 UTRNP46939 3433 aa15.33■□□□□ 0.05
RUNX1-213ENST00000469087 VIL1P09327 827 aaKnown RBP15.33■□□□□ 0.04
RUNX1-213ENST00000469087 GNAT2P19087 354 aa15.33■□□□□ 0.04
RUNX1-213ENST00000469087 ADCK5Q3MIX3 580 aa15.33■□□□□ 0.04
RUNX1-213ENST00000469087 KIAA0825Q8IV33 1275 aa15.33■□□□□ 0.04
RUNX1-213ENST00000469087 IFNL3Q8IZI9 196 aa15.33■□□□□ 0.04
RUNX1-213ENST00000469087 JDP2Q8WYK2 163 aa15.33■□□□□ 0.04
RUNX1-213ENST00000469087 MROH7-TTC4A0A0A0MT08 1334 aa15.32■□□□□ 0.04
RUNX1-213ENST00000469087 GPR75-ASB3A0A0A6YYF3 556 aa15.32■□□□□ 0.04
RUNX1-213ENST00000469087 PSMD14O00487 310 aa15.32■□□□□ 0.04
RUNX1-213ENST00000469087 SCNN1DP51172 638 aa15.32■□□□□ 0.04
RUNX1-213ENST00000469087 PPP4CP60510 307 aa15.32■□□□□ 0.04
RUNX1-213ENST00000469087 CXCL9Q07325 125 aa15.32■□□□□ 0.04
RUNX1-213ENST00000469087 ALX1Q15699 326 aa15.32■□□□□ 0.04
RUNX1-213ENST00000469087 TSGA10IPQ3SY00 556 aa15.32■□□□□ 0.04
RUNX1-213ENST00000469087 RNF20Q5VTR2 975 aa15.32■□□□□ 0.04
RUNX1-213ENST00000469087 SDR42E1Q8WUS8 393 aa15.32■□□□□ 0.04
RUNX1-213ENST00000469087 EPB41L4AQ9HCS5 686 aaPredicted RBP15.32■□□□□ 0.04
RUNX1-213ENST00000469087 GAKO14976 1311 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms