RNA–Protein interactions for RNA: ENST00000469006.1

SNED1-209, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 963 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-209ENST00000469006 TEPSINQ96N21 525 aa18.39■□□□□ 0.53
SNED1-209ENST00000469006 MRS2Q9HD23 443 aa18.39■□□□□ 0.53
SNED1-209ENST00000469006 C9orf78Q9NZ63 289 aaPredicted RBP18.39■□□□□ 0.53
SNED1-209ENST00000469006 TCP10L2B9ZVM9 353 aa18.38■□□□□ 0.53
SNED1-209ENST00000469006 UBE4AQ14139 1066 aa18.38■□□□□ 0.53
SNED1-209ENST00000469006 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.38■□□□□ 0.53
SNED1-209ENST00000469006 DZIP1LQ8IYY4 767 aaKnown RBP18.38■□□□□ 0.53
SNED1-209ENST00000469006 BRI3BPQ8WY22 251 aa18.38■□□□□ 0.53
SNED1-209ENST00000469006 MS4A4AQ96JQ5 239 aa18.38■□□□□ 0.53
SNED1-209ENST00000469006 TMEM39BQ9GZU3 492 aa18.38■□□□□ 0.53
SNED1-209ENST00000469006 CCL15-CCL14A0A0B4J2E2 113 aa18.37■□□□□ 0.53
SNED1-209ENST00000469006 CRKP46108 304 aa18.37■□□□□ 0.53
SNED1-209ENST00000469006 VGLL4Q14135 290 aa18.37■□□□□ 0.53
SNED1-209ENST00000469006 CCL15Q16663 113 aa18.37■□□□□ 0.53
SNED1-209ENST00000469006 FAM84BQ96KN1 310 aaPredicted RBP18.37■□□□□ 0.53
SNED1-209ENST00000469006 PUS3Q9BZE2 481 aaKnown RBP18.37■□□□□ 0.53
SNED1-209ENST00000469006 ALDH1L1O75891 902 aa18.36■□□□□ 0.53
SNED1-209ENST00000469006 EN2P19622 333 aaPredicted RBP18.36■□□□□ 0.53
SNED1-209ENST00000469006 TNNI2P48788 182 aa18.36■□□□□ 0.53
SNED1-209ENST00000469006 TAF1CQ15572 869 aaPredicted RBP18.36■□□□□ 0.53
SNED1-209ENST00000469006 HABP4Q5JVS0 413 aaKnown RBP18.36■□□□□ 0.53
SNED1-209ENST00000469006 GTF2A2P52657 109 aa18.35■□□□□ 0.53
SNED1-209ENST00000469006 MAP3K9P80192 1104 aa18.35■□□□□ 0.53
SNED1-209ENST00000469006 GRIK5Q16478 980 aa18.35■□□□□ 0.53
SNED1-209ENST00000469006 SLC4A10Q6U841 1118 aa18.35■□□□□ 0.53
SNED1-209ENST00000469006 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.35■□□□□ 0.53
SNED1-209ENST00000469006 OTUD5Q96G74 571 aa18.35■□□□□ 0.53
SNED1-209ENST00000469006 SUCLG2Q96I99 432 aa18.35■□□□□ 0.53
SNED1-209ENST00000469006 ZFYVE28Q9HCC9 887 aa18.35■□□□□ 0.53
SNED1-209ENST00000469006 SPINK5Q9NQ38 1064 aaPredicted RBP18.35■□□□□ 0.53
SNED1-209ENST00000469006 IQSEC3Q9UPP2 1182 aaPredicted RBP18.35■□□□□ 0.53
SNED1-209ENST00000469006 CSADQ9Y600 493 aa18.35■□□□□ 0.53
SNED1-209ENST00000469006 BRCA2P51587 3418 aa18.35■□□□□ 0.53
SNED1-209ENST00000469006 CHAF1AQ13111 956 aaPredicted RBP18.34■□□□□ 0.53
SNED1-209ENST00000469006 FAM43AQ8N2R8 423 aa18.34■□□□□ 0.53
SNED1-209ENST00000469006 ZNF333Q96JL9 665 aa18.34■□□□□ 0.53
SNED1-209ENST00000469006 SRCIN1Q9C0H9 1055 aa18.34■□□□□ 0.53
SNED1-209ENST00000469006 MROH5Q6ZUA9 1318 aa18.33■□□□□ 0.53
SNED1-209ENST00000469006 CACNB3P54284 484 aa18.33■□□□□ 0.52
SNED1-209ENST00000469006 SLC9C1Q4G0N8 1177 aa18.33■□□□□ 0.52
SNED1-209ENST00000469006 VPS37DQ86XT2 251 aa18.33■□□□□ 0.52
SNED1-209ENST00000469006 KAZALD1Q96I82 304 aa18.33■□□□□ 0.52
SNED1-209ENST00000469006 TMEM106CQ9BVX2 250 aa18.33■□□□□ 0.52
SNED1-209ENST00000469006 PTCH2Q9Y6C5 1203 aa18.33■□□□□ 0.52
SNED1-209ENST00000469006 SPDYE5A6NIY4 337 aa18.32■□□□□ 0.52
SNED1-209ENST00000469006 ARHGEF6Q15052 776 aa18.32■□□□□ 0.52
SNED1-209ENST00000469006 FBXO33Q7Z6M2 555 aa18.32■□□□□ 0.52
SNED1-209ENST00000469006 RIPOR2Q9Y4F9 1068 aa18.32■□□□□ 0.52
SNED1-209ENST00000469006 NBPF7P0C2Y1 421 aaPredicted RBP18.31■□□□□ 0.52
SNED1-209ENST00000469006 HDLBPQ00341 1268 aaKnown RBP18.31■□□□□ 0.52
SNED1-209ENST00000469006 TBC1D22AQ8WUA7 517 aa18.31■□□□□ 0.52
SNED1-209ENST00000469006 TEKT1Q969V4 418 aa18.31■□□□□ 0.52
SNED1-209ENST00000469006 SNCAIPQ9Y6H5 919 aa18.31■□□□□ 0.52
SNED1-209ENST00000469006 ZSWIM8A7E2V4 1837 aa18.3■□□□□ 0.52
SNED1-209ENST00000469006 FRAT2O75474 233 aaPredicted RBP18.3■□□□□ 0.52
SNED1-209ENST00000469006 LRRC24Q50LG9 513 aa18.3■□□□□ 0.52
SNED1-209ENST00000469006 METTL24Q5JXM2 366 aa18.3■□□□□ 0.52
SNED1-209ENST00000469006 NBPF11Q86T75 865 aa18.3■□□□□ 0.52
SNED1-209ENST00000469006 WRNIP1Q96S55 665 aa18.3■□□□□ 0.52
SNED1-209ENST00000469006 BICC1Q9H694 974 aaKnown RBP18.3■□□□□ 0.52
SNED1-209ENST00000469006 TMOD2Q9NZR1 351 aa18.3■□□□□ 0.52
SNED1-209ENST00000469006 UTYO14607 1347 aa18.29■□□□□ 0.52
SNED1-209ENST00000469006 WDHD1O75717 1129 aaPredicted RBP18.29■□□□□ 0.52
SNED1-209ENST00000469006 CETPP11597 493 aa18.29■□□□□ 0.52
SNED1-209ENST00000469006 RABL6Q3YEC7 729 aaPredicted RBP18.29■□□□□ 0.52
SNED1-209ENST00000469006 CAVIN4Q5BKX8 364 aa18.29■□□□□ 0.52
SNED1-209ENST00000469006 ARHGAP39Q9C0H5 1083 aa18.29■□□□□ 0.52
SNED1-209ENST00000469006 CEP290O15078 2479 aa18.28■□□□□ 0.52
SNED1-209ENST00000469006 MYCP01106 439 aaPredicted RBP18.28■□□□□ 0.52
SNED1-209ENST00000469006 SLC4A8Q2Y0W8 1093 aa18.28■□□□□ 0.52
SNED1-209ENST00000469006 ERO1BQ86YB8 467 aa18.28■□□□□ 0.52
SNED1-209ENST00000469006 ANKRD44Q8N8A2 993 aa18.28■□□□□ 0.52
SNED1-209ENST00000469006 ZKSCAN4Q969J2 545 aaPredicted RBP18.28■□□□□ 0.52
SNED1-209ENST00000469006 ZDHHC15Q96MV8 337 aa18.28■□□□□ 0.52
SNED1-209ENST00000469006 BTBD19C9JJ37 291 aa18.27■□□□□ 0.52
SNED1-209ENST00000469006 TLR2O60603 784 aa18.27■□□□□ 0.52
SNED1-209ENST00000469006 PPIL2Q13356 520 aa18.27■□□□□ 0.52
SNED1-209ENST00000469006 SNAPC2Q13487 334 aa18.27■□□□□ 0.52
SNED1-209ENST00000469006 KIF22Q14807 665 aa18.27■□□□□ 0.52
SNED1-209ENST00000469006 FAM83AQ86UY5 434 aa18.27■□□□□ 0.52
SNED1-209ENST00000469006 VGLL2Q8N8G2 317 aa18.27■□□□□ 0.52
SNED1-209ENST00000469006 SH3TC2Q8TF17 1288 aa18.27■□□□□ 0.52
SNED1-209ENST00000469006 HOOK2Q96ED9 719 aa18.27■□□□□ 0.52
SNED1-209ENST00000469006 ZCCHC17Q9NP64 241 aaKnown RBP18.27■□□□□ 0.52
SNED1-209ENST00000469006 RPAP1Q9BWH6 1393 aaPredicted RBP18.27■□□□□ 0.51
SNED1-209ENST00000469006 MAST3O60307 1309 aa18.26■□□□□ 0.51
SNED1-209ENST00000469006 IRF6O14896 467 aa18.26■□□□□ 0.51
SNED1-209ENST00000469006 PDE8BO95263 885 aa18.26■□□□□ 0.51
SNED1-209ENST00000469006 BCAMP50895 628 aa18.26■□□□□ 0.51
SNED1-209ENST00000469006 LACTBP83111 547 aaPredicted RBP18.26■□□□□ 0.51
SNED1-209ENST00000469006 FKBP1CQ5VVH2 108 aa18.26■□□□□ 0.51
SNED1-209ENST00000469006 APOBEC3HQ6NTF7 200 aaKnown RBP18.26■□□□□ 0.51
SNED1-209ENST00000469006 FXR1P51114 621 aaKnown RBP eCLIP18.25■□□□□ 0.51
SNED1-209ENST00000469006 DCAF15Q66K64 600 aa18.25■□□□□ 0.51
SNED1-209ENST00000469006 KLHDC4Q8TBB5 520 aa18.25■□□□□ 0.51
SNED1-209ENST00000469006 MRIQ9BWK5 157 aa18.24■□□□□ 0.51
SNED1-209ENST00000469006 ZNF341Q9BYN7 854 aa18.24■□□□□ 0.51
SNED1-209ENST00000469006 SUGT1Q9Y2Z0 365 aa18.24■□□□□ 0.51
SNED1-209ENST00000469006 KIF16BQ96L93 1317 aa18.23■□□□□ 0.51
SNED1-209ENST00000469006 CCER2I3L3R5 266 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms