RNA–Protein interactions for RNA: ENST00000468844.1

RPL39-202, Transcript of ribosomal protein L39, humanhuman

TSL 1 (best)

Gene RPL39, Length 1,915 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-202ENST00000468844 MAST3O60307 1309 aa21.1■□□□□ 0.97
RPL39-202ENST00000468844 YBX3P16989 372 aaKnown RBP eCLIP21.1■□□□□ 0.977e-18■■□□□ 11.5
RPL39-202ENST00000468844 APPBP2Q92624 585 aa21.1■□□□□ 0.97
RPL39-202ENST00000468844 FBXW7Q969H0 707 aa21.1■□□□□ 0.97
RPL39-202ENST00000468844 PUS7LQ9H0K6 701 aaKnown RBP21.1■□□□□ 0.97
RPL39-202ENST00000468844 BAZ2AQ9UIF9 1905 aaKnown RBP21.09■□□□□ 0.97
RPL39-202ENST00000468844 MCMDC2Q4G0Z9 681 aa21.09■□□□□ 0.97
RPL39-202ENST00000468844 CERS5Q8N5B7 392 aa21.09■□□□□ 0.97
RPL39-202ENST00000468844 HELLSQ9NRZ9 838 aa21.09■□□□□ 0.97
RPL39-202ENST00000468844 ECM29Q5VYK3 1845 aa21.09■□□□□ 0.97
RPL39-202ENST00000468844 M0R2C6 588 aa21.08■□□□□ 0.97
RPL39-202ENST00000468844 LDHBP07195 334 aaKnown RBP21.08■□□□□ 0.97
RPL39-202ENST00000468844 MECOMQ03112 1051 aa21.08■□□□□ 0.97
RPL39-202ENST00000468844 STRIP1Q5VSL9 837 aa21.08■□□□□ 0.97
RPL39-202ENST00000468844 CCDC129Q6ZRS4 1044 aa21.08■□□□□ 0.97
RPL39-202ENST00000468844 ADGRA1Q86SQ6 560 aa21.08■□□□□ 0.97
RPL39-202ENST00000468844 MXD3Q9BW11 206 aa21.08■□□□□ 0.97
RPL39-202ENST00000468844 SPTY2D1Q68D10 685 aaPredicted RBP21.08■□□□□ 0.96
RPL39-202ENST00000468844 FOCADQ5VW36 1801 aa21.07■□□□□ 0.96
RPL39-202ENST00000468844 REC8O95072 547 aa21.07■□□□□ 0.96
RPL39-202ENST00000468844 DACT2Q5SW24 774 aa21.07■□□□□ 0.96
RPL39-202ENST00000468844 ANO2Q9NQ90 1003 aa21.07■□□□□ 0.96
RPL39-202ENST00000468844 USP17L3A6NCW0 530 aa21.06■□□□□ 0.96
RPL39-202ENST00000468844 USP17L4A6NCW7 530 aa21.06■□□□□ 0.96
RPL39-202ENST00000468844 USP17L1Q7RTZ2 530 aa21.06■□□□□ 0.96
RPL39-202ENST00000468844 NIM1KQ8IY84 436 aa21.06■□□□□ 0.96
RPL39-202ENST00000468844 CCDC171Q6TFL3 1326 aa21.06■□□□□ 0.96
RPL39-202ENST00000468844 NAA16Q6N069 864 aaPredicted RBP21.06■□□□□ 0.96
RPL39-202ENST00000468844 ARHGAP27Q6ZUM4 889 aa21.06■□□□□ 0.96
RPL39-202ENST00000468844 DZIP1Q86YF9 867 aaKnown RBP21.06■□□□□ 0.96
RPL39-202ENST00000468844 ZNRF3Q9ULT6 936 aa21.06■□□□□ 0.96
RPL39-202ENST00000468844 IGSF3O75054 1194 aa21.05■□□□□ 0.96
RPL39-202ENST00000468844 CYP7A1P22680 504 aa21.05■□□□□ 0.96
RPL39-202ENST00000468844 JDP2Q8WYK2 163 aa21.05■□□□□ 0.96
RPL39-202ENST00000468844 LSG1Q9H089 658 aaKnown RBP21.05■□□□□ 0.96
RPL39-202ENST00000468844 EIF5BO60841 1220 aaKnown RBP21.04■□□□□ 0.96
RPL39-202ENST00000468844 DIXDC1Q155Q3 683 aa21.04■□□□□ 0.96
RPL39-202ENST00000468844 ANP32EQ9BTT0 268 aa21.04■□□□□ 0.96
RPL39-202ENST00000468844 USP26Q9BXU7 913 aa21.04■□□□□ 0.96
RPL39-202ENST00000468844 LAMA4Q16363 1823 aa21.04■□□□□ 0.96
RPL39-202ENST00000468844 GPAA1O43292 621 aa21.04■□□□□ 0.96
RPL39-202ENST00000468844 FKBP1AP62942 108 aaKnown RBP21.04■□□□□ 0.96
RPL39-202ENST00000468844 UPF2Q9HAU5 1272 aaKnown RBP21.04■□□□□ 0.96
RPL39-202ENST00000468844 SUGT1Q9Y2Z0 365 aa21.04■□□□□ 0.96
RPL39-202ENST00000468844 RAD17O75943 681 aa21.03■□□□□ 0.96
RPL39-202ENST00000468844 PTH1RQ03431 593 aa21.03■□□□□ 0.96
RPL39-202ENST00000468844 MIGA1Q8NAN2 632 aa21.03■□□□□ 0.96
RPL39-202ENST00000468844 PSMD14O00487 310 aa21.02■□□□□ 0.96
RPL39-202ENST00000468844 VPS53Q5VIR6 699 aa21.02■□□□□ 0.96
RPL39-202ENST00000468844 TMED8Q6PL24 325 aaPredicted RBP21.02■□□□□ 0.96
RPL39-202ENST00000468844 AIDAQ96BJ3 306 aa21.02■□□□□ 0.96
RPL39-202ENST00000468844 F8W031 263 aaPredicted RBP21.02■□□□□ 0.95
RPL39-202ENST00000468844 KIAA1211Q6ZU35 1233 aa21.02■□□□□ 0.95
RPL39-202ENST00000468844 TTF2Q9UNY4 1162 aaKnown RBP21.02■□□□□ 0.95
RPL39-202ENST00000468844 NAV1Q8NEY1 1877 aa21.01■□□□□ 0.95
RPL39-202ENST00000468844 MBD4O95243 580 aa21.01■□□□□ 0.95
RPL39-202ENST00000468844 LMNB1P20700 586 aa21.01■□□□□ 0.95
RPL39-202ENST00000468844 CXCL9Q07325 125 aa21.01■□□□□ 0.95
RPL39-202ENST00000468844 RIOK1Q9BRS2 568 aaKnown RBP21.01■□□□□ 0.95
RPL39-202ENST00000468844 C22orf23Q9BZE7 217 aa21.01■□□□□ 0.95
RPL39-202ENST00000468844 MYH1P12882 1939 aa21.01■□□□□ 0.95
RPL39-202ENST00000468844 FOXP2O15409 715 aa21■□□□□ 0.95
RPL39-202ENST00000468844 VIL1P09327 827 aaKnown RBP21■□□□□ 0.95
RPL39-202ENST00000468844 KIAA0825Q8IV33 1275 aa21■□□□□ 0.95
RPL39-202ENST00000468844 LCORLQ8N3X6 602 aa21■□□□□ 0.95
RPL39-202ENST00000468844 TBC1D32Q96NH3 1257 aa21■□□□□ 0.95
RPL39-202ENST00000468844 MROH7-TTC4A0A0A0MT08 1334 aa21■□□□□ 0.95
RPL39-202ENST00000468844 EPB41L2O43491 1005 aaKnown RBP21■□□□□ 0.95
RPL39-202ENST00000468844 HSPD1P10809 573 aaKnown RBP21■□□□□ 0.95
RPL39-202ENST00000468844 MAP4K1Q92918 833 aa21■□□□□ 0.95
RPL39-202ENST00000468844 STRBPQ96SI9 672 aaKnown RBP21■□□□□ 0.95
RPL39-202ENST00000468844 ARMT1Q9H993 441 aa21■□□□□ 0.95
RPL39-202ENST00000468844 AATFQ9NY61 560 aaKnown RBP eCLIP21■□□□□ 0.957e-46■■□□□ 13.1
RPL39-202ENST00000468844 LAMB1P07942 1786 aa20.99■□□□□ 0.95
RPL39-202ENST00000468844 FZD9O00144 591 aa20.99■□□□□ 0.95
RPL39-202ENST00000468844 GSTO1P78417 241 aa20.99■□□□□ 0.95
RPL39-202ENST00000468844 RSBN1LQ6PCB5 846 aaPredicted RBP20.99■□□□□ 0.95
RPL39-202ENST00000468844 MAGEB6P1A0A0J9YX57 407 aa20.98■□□□□ 0.95
RPL39-202ENST00000468844 DYNLL1P63167 89 aaKnown RBP20.98■□□□□ 0.95
RPL39-202ENST00000468844 GPR162Q16538 588 aa20.98■□□□□ 0.95
RPL39-202ENST00000468844 GAKO14976 1311 aa20.98■□□□□ 0.95
RPL39-202ENST00000468844 MYO3BQ8WXR4 1341 aa20.98■□□□□ 0.95
RPL39-202ENST00000468844 RBM25P49756 843 aaKnown RBP20.98■□□□□ 0.95
RPL39-202ENST00000468844 CIAPIN1Q6FI81 312 aa20.98■□□□□ 0.95
RPL39-202ENST00000468844 FAM163AQ96GL9 167 aaPredicted RBP20.98■□□□□ 0.95
RPL39-202ENST00000468844 ZBTB12Q9Y330 459 aaPredicted RBP20.98■□□□□ 0.95
RPL39-202ENST00000468844 SCNN1DP51172 638 aa20.97■□□□□ 0.95
RPL39-202ENST00000468844 GMLQ99445 158 aa20.97■□□□□ 0.95
RPL39-202ENST00000468844 DSCC1Q9BVC3 393 aa20.97■□□□□ 0.95
RPL39-202ENST00000468844 DDX60LQ5H9U9 1706 aaKnown RBP20.97■□□□□ 0.95
RPL39-202ENST00000468844 LDHCP07864 332 aa20.96■□□□□ 0.95
RPL39-202ENST00000468844 SLF2Q8IX21 1173 aa20.96■□□□□ 0.95
RPL39-202ENST00000468844 DAGLAQ9Y4D2 1042 aa20.96■□□□□ 0.95
RPL39-202ENST00000468844 RBM8AQ9Y5S9 174 aaKnown RBP20.96■□□□□ 0.95
RPL39-202ENST00000468844 GPR75-ASB3A0A0A6YYF3 556 aa20.95■□□□□ 0.94
RPL39-202ENST00000468844 PRKAB2O43741 272 aa20.95■□□□□ 0.94
RPL39-202ENST00000468844 HSPA4P34932 840 aa20.95■□□□□ 0.94
RPL39-202ENST00000468844 BTDP43251 543 aa20.95■□□□□ 0.94
RPL39-202ENST00000468844 ZNF541Q9H0D2 1346 aa20.95■□□□□ 0.94
RPL39-202ENST00000468844 EIF6P56537 245 aaKnown RBP20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 195.6 ms