RNA–Protein interactions for RNA: ENST00000468723.1

GPNMB-207, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 808 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-207ENST00000468723 PREPP48147 710 aa7.03□□□□□ -1.28
GPNMB-207ENST00000468723 PTPN12Q05209 780 aaKnown RBP7.03□□□□□ -1.28
GPNMB-207ENST00000468723 PRSS36Q5K4E3 855 aa7.03□□□□□ -1.28
GPNMB-207ENST00000468723 NUTM2GQ5VZR2 741 aa7.03□□□□□ -1.28
GPNMB-207ENST00000468723 ALG1LQ6GMV1 187 aa7.03□□□□□ -1.28
GPNMB-207ENST00000468723 PRR23CQ6ZRP0 262 aa7.03□□□□□ -1.28
GPNMB-207ENST00000468723 C12orf50Q8NA57 414 aaPredicted RBP7.03□□□□□ -1.28
GPNMB-207ENST00000468723 UTP4Q969X6 686 aaKnown RBP7.03□□□□□ -1.28
GPNMB-207ENST00000468723 TRIM56Q9BRZ2 755 aaKnown RBP7.03□□□□□ -1.28
GPNMB-207ENST00000468723 TMPRSS13Q9BYE2 586 aa7.03□□□□□ -1.28
GPNMB-207ENST00000468723 OSBPL7Q9BZF2 842 aa7.03□□□□□ -1.28
GPNMB-207ENST00000468723 NRSN2Q9GZP1 204 aa7.03□□□□□ -1.28
GPNMB-207ENST00000468723 GPN3Q9UHW5 284 aaPredicted RBP7.03□□□□□ -1.28
GPNMB-207ENST00000468723 CYP11A1P05108 521 aa7.02□□□□□ -1.29
GPNMB-207ENST00000468723 DRD2P14416 443 aa7.02□□□□□ -1.29
GPNMB-207ENST00000468723 EXOSC6Q5RKV6 272 aaKnown RBP7.02□□□□□ -1.29
GPNMB-207ENST00000468723 DDX54Q8TDD1 881 aaKnown RBP7.02□□□□□ -1.29
GPNMB-207ENST00000468723 FBF1Q8TES7 1133 aa7.02□□□□□ -1.29
GPNMB-207ENST00000468723 FAM46AQ96IP4 442 aaKnown RBP7.02□□□□□ -1.29
GPNMB-207ENST00000468723 CORO1BQ9BR76 489 aa7.02□□□□□ -1.29
GPNMB-207ENST00000468723 ZC3H12CQ9C0D7 883 aaKnown RBP7.02□□□□□ -1.29
GPNMB-207ENST00000468723 MEGF11A6BM72 1044 aa7.01□□□□□ -1.29
GPNMB-207ENST00000468723 DHX15O43143 795 aaKnown RBP7.01□□□□□ -1.29
GPNMB-207ENST00000468723 TRIM26Q12899 539 aaPredicted RBP7.01□□□□□ -1.29
GPNMB-207ENST00000468723 RPS26P11Q5JNZ5 115 aaPredicted RBP7.01□□□□□ -1.29
GPNMB-207ENST00000468723 ANKRD34AQ69YU3 496 aa7.01□□□□□ -1.29
GPNMB-207ENST00000468723 CYP4F12Q9HCS2 524 aa7.01□□□□□ -1.29
GPNMB-207ENST00000468723 RNF19AQ9NV58 838 aa7.01□□□□□ -1.29
GPNMB-207ENST00000468723 GAS2O43903 313 aaKnown RBP7□□□□□ -1.29
GPNMB-207ENST00000468723 BMP3P12645 472 aa7□□□□□ -1.29
GPNMB-207ENST00000468723 PDE3AQ14432 1141 aa7□□□□□ -1.29
GPNMB-207ENST00000468723 KCNF1Q9H3M0 494 aa7□□□□□ -1.29
GPNMB-207ENST00000468723 RAD18Q9NS91 495 aa7□□□□□ -1.29
GPNMB-207ENST00000468723 STOML1Q9UBI4 398 aa7□□□□□ -1.29
GPNMB-207ENST00000468723 RAXQ9Y2V3 346 aa7□□□□□ -1.29
GPNMB-207ENST00000468723 FBXO24O75426 580 aa6.99□□□□□ -1.29
GPNMB-207ENST00000468723 XRCC5P13010 732 aaKnown RBP6.99□□□□□ -1.29
GPNMB-207ENST00000468723 EAPPQ56P03 285 aaPredicted RBP6.99□□□□□ -1.29
GPNMB-207ENST00000468723 AKAP4Q5JQC9 854 aa6.99□□□□□ -1.29
GPNMB-207ENST00000468723 SMG8Q8ND04 991 aaKnown RBP6.99□□□□□ -1.29
GPNMB-207ENST00000468723 C3orf58Q8NDZ4 430 aa6.99□□□□□ -1.29
GPNMB-207ENST00000468723 MYRFLQ96LU7 910 aa6.99□□□□□ -1.29
GPNMB-207ENST00000468723 TMEM39AQ9NV64 488 aa6.99□□□□□ -1.29
GPNMB-207ENST00000468723 SPG7Q9UQ90 795 aa6.99□□□□□ -1.29
GPNMB-207ENST00000468723 EIF4EBP3O60516 100 aaPredicted RBP6.98□□□□□ -1.29
GPNMB-207ENST00000468723 RXRBP28702 533 aa6.98□□□□□ -1.29
GPNMB-207ENST00000468723 GSTT1P30711 240 aa6.98□□□□□ -1.29
GPNMB-207ENST00000468723 AP3B2Q13367 1082 aa6.98□□□□□ -1.29
GPNMB-207ENST00000468723 CCDC27Q2M243 656 aa6.98□□□□□ -1.29
GPNMB-207ENST00000468723 UVSSAQ2YD98 709 aa6.98□□□□□ -1.29
GPNMB-207ENST00000468723 SGO2Q562F6 1265 aa6.98□□□□□ -1.29
GPNMB-207ENST00000468723 TPTE2Q6XPS3 522 aa6.98□□□□□ -1.29
GPNMB-207ENST00000468723 DNAJC14Q6Y2X3 702 aaPredicted RBP6.98□□□□□ -1.29
GPNMB-207ENST00000468723 TRIM42Q8IWZ5 723 aa6.98□□□□□ -1.29
GPNMB-207ENST00000468723 SUGCTQ9HAC7 445 aa6.98□□□□□ -1.29
GPNMB-207ENST00000468723 ZFYVE1Q9HBF4 777 aa6.98□□□□□ -1.29
GPNMB-207ENST00000468723 HMX2A2RU54 273 aa6.97□□□□□ -1.29
GPNMB-207ENST00000468723 TIAF1O95411 115 aa6.97□□□□□ -1.29
GPNMB-207ENST00000468723 LIG1P18858 919 aa6.97□□□□□ -1.29
GPNMB-207ENST00000468723 FSTP19883 344 aa6.97□□□□□ -1.29
GPNMB-207ENST00000468723 PPP2R3AQ06190 1150 aa6.97□□□□□ -1.29
GPNMB-207ENST00000468723 SOX4Q06945 474 aaPredicted RBP6.97□□□□□ -1.29
GPNMB-207ENST00000468723 ZMYM1Q5SVZ6 1142 aa6.97□□□□□ -1.29
GPNMB-207ENST00000468723 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.97□□□□□ -1.29
GPNMB-207ENST00000468723 BEND4Q6ZU67 534 aa6.97□□□□□ -1.29
GPNMB-207ENST00000468723 NPAS4Q8IUM7 802 aa6.97□□□□□ -1.29
GPNMB-207ENST00000468723 FAM20CQ8IXL6 584 aa6.97□□□□□ -1.29
GPNMB-207ENST00000468723 STK35Q8TDR2 534 aa6.97□□□□□ -1.29
GPNMB-207ENST00000468723 DUSP9Q99956 384 aaKnown RBP6.97□□□□□ -1.29
GPNMB-207ENST00000468723 C12orf49Q9H741 205 aa6.97□□□□□ -1.29
GPNMB-207ENST00000468723 C7orf69Q9H7B7 122 aa6.97□□□□□ -1.29
GPNMB-207ENST00000468723 GIPC1O14908 333 aa6.96□□□□□ -1.3
GPNMB-207ENST00000468723 PRPF40AO75400 957 aaKnown RBP6.96□□□□□ -1.3
GPNMB-207ENST00000468723 ADH5P11766 374 aa6.96□□□□□ -1.3
GPNMB-207ENST00000468723 USP11P51784 963 aa6.96□□□□□ -1.3
GPNMB-207ENST00000468723 DYMQ7RTS9 669 aa6.96□□□□□ -1.3
GPNMB-207ENST00000468723 C2CD4AQ8NCU7 369 aaPredicted RBP6.96□□□□□ -1.3
GPNMB-207ENST00000468723 FBLIM1Q8WUP2 373 aa6.96□□□□□ -1.3
GPNMB-207ENST00000468723 KCNB2Q92953 911 aa6.96□□□□□ -1.3
GPNMB-207ENST00000468723 WDR89Q96FK6 387 aaPredicted RBP6.96□□□□□ -1.3
GPNMB-207ENST00000468723 SRCIN1Q9C0H9 1055 aa6.96□□□□□ -1.3
GPNMB-207ENST00000468723 CCDC86Q9H6F5 360 aaKnown RBP6.96□□□□□ -1.3
GPNMB-207ENST00000468723 AP4E1Q9UPM8 1137 aa6.96□□□□□ -1.3
GPNMB-207ENST00000468723 AOC2O75106 756 aa6.95□□□□□ -1.3
GPNMB-207ENST00000468723 GSTP1P09211 210 aaKnown RBP6.95□□□□□ -1.3
GPNMB-207ENST00000468723 USP17L7P0C7H9 530 aa6.95□□□□□ -1.3
GPNMB-207ENST00000468723 MAP4P27816 1152 aaKnown RBP6.95□□□□□ -1.3
GPNMB-207ENST00000468723 GNA15P30679 374 aa6.95□□□□□ -1.3
GPNMB-207ENST00000468723 TAGLNQ01995 201 aaKnown RBP6.95□□□□□ -1.3
GPNMB-207ENST00000468723 HP1BP3Q5SSJ5 553 aaPredicted RBP6.95□□□□□ -1.3
GPNMB-207ENST00000468723 CDPF1Q6NVV7 123 aa6.95□□□□□ -1.3
GPNMB-207ENST00000468723 CLEC10AQ8IUN9 316 aa6.95□□□□□ -1.3
GPNMB-207ENST00000468723 SULF2Q8IWU5 870 aa6.95□□□□□ -1.3
GPNMB-207ENST00000468723 WDR18Q9BV38 432 aa6.95□□□□□ -1.3
GPNMB-207ENST00000468723 CBX8Q9HC52 389 aa6.95□□□□□ -1.3
GPNMB-207ENST00000468723 FAM8A1Q9UBU6 413 aa6.95□□□□□ -1.3
GPNMB-207ENST00000468723 COL19A1Q14993 1142 aa6.94□□□□□ -1.3
GPNMB-207ENST00000468723 NECAB3Q96P71 396 aaPredicted RBP6.94□□□□□ -1.3
GPNMB-207ENST00000468723 FAM83CQ9BQN1 747 aa6.94□□□□□ -1.3
GPNMB-207ENST00000468723 PARP2Q9UGN5 583 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms