RNA–Protein interactions for RNA: ENST00000468179.6

COMMD3-206, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,344 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-206ENST00000468179 TTLL12Q14166 644 aaPredicted RBP18.08■□□□□ 0.49
COMMD3-206ENST00000468179 PRMT6Q96LA8 375 aaPredicted RBP18.08■□□□□ 0.49
COMMD3-206ENST00000468179 DEFB129Q9H1M3 183 aa18.08■□□□□ 0.49
COMMD3-206ENST00000468179 ZNF646O15015 1829 aaPredicted RBP18.08■□□□□ 0.48
COMMD3-206ENST00000468179 CA12O43570 354 aa18.07■□□□□ 0.48
COMMD3-206ENST00000468179 CRKP46108 304 aa18.07■□□□□ 0.48
COMMD3-206ENST00000468179 ATP8B2P98198 1209 aa18.07■□□□□ 0.48
COMMD3-206ENST00000468179 SUPT20HL1Q3ZLR7 823 aa18.07■□□□□ 0.48
COMMD3-206ENST00000468179 ARMC9Q7Z3E5 817 aa18.07■□□□□ 0.48
COMMD3-206ENST00000468179 TEKT1Q969V4 418 aa18.07■□□□□ 0.48
COMMD3-206ENST00000468179 DENND2AQ9ULE3 1009 aa18.07■□□□□ 0.48
COMMD3-206ENST00000468179 ZBTB7BO15156 539 aaPredicted RBP18.06■□□□□ 0.48
COMMD3-206ENST00000468179 FOXN1O15353 648 aa18.06■□□□□ 0.48
COMMD3-206ENST00000468179 TFCP2Q12800 502 aa18.06■□□□□ 0.48
COMMD3-206ENST00000468179 MVPQ14764 893 aaKnown RBP18.06■□□□□ 0.48
COMMD3-206ENST00000468179 CHMP4BQ9H444 224 aaKnown RBP18.06■□□□□ 0.48
COMMD3-206ENST00000468179 VEZTQ9HBM0 779 aa18.06■□□□□ 0.48
COMMD3-206ENST00000468179 RCAN3Q9UKA8 241 aa18.06■□□□□ 0.48
COMMD3-206ENST00000468179 SCAF8Q9UPN6 1271 aaKnown RBP18.06■□□□□ 0.48
COMMD3-206ENST00000468179 POLR2AP24928 1970 aaKnown RBP18.05■□□□□ 0.48
COMMD3-206ENST00000468179 PNMA6EA0A0J9YXQ4 647 aa18.05■□□□□ 0.48
COMMD3-206ENST00000468179 CLRN2A0PK11 232 aa18.05■□□□□ 0.48
COMMD3-206ENST00000468179 AOC2O75106 756 aa18.05■□□□□ 0.48
COMMD3-206ENST00000468179 TNNI2P48788 182 aa18.05■□□□□ 0.48
COMMD3-206ENST00000468179 PRAMEF18Q5VWM3 479 aa18.05■□□□□ 0.48
COMMD3-206ENST00000468179 REM2Q8IYK8 340 aaPredicted RBP18.05■□□□□ 0.48
COMMD3-206ENST00000468179 ZGPATQ8N5A5 531 aaKnown RBP18.05■□□□□ 0.48
COMMD3-206ENST00000468179 PRDM10Q9NQV6 1147 aa18.05■□□□□ 0.48
COMMD3-206ENST00000468179 ZNF70Q9UC06 446 aaPredicted RBP18.05■□□□□ 0.48
COMMD3-206ENST00000468179 A0A1B0GUL7 405 aa18.04■□□□□ 0.48
COMMD3-206ENST00000468179 PPP1R12BO60237 982 aaPredicted RBP18.04■□□□□ 0.48
COMMD3-206ENST00000468179 RLBP1P12271 317 aa18.04■□□□□ 0.48
COMMD3-206ENST00000468179 TIMM10P62072 90 aa18.04■□□□□ 0.48
COMMD3-206ENST00000468179 SPDYE2Q495Y8 402 aa18.04■□□□□ 0.48
COMMD3-206ENST00000468179 GORABQ5T7V8 394 aa18.04■□□□□ 0.48
COMMD3-206ENST00000468179 CCDC102BQ68D86 513 aa18.04■□□□□ 0.48
COMMD3-206ENST00000468179 HHIPL2Q6UWX4 724 aa18.04■□□□□ 0.48
COMMD3-206ENST00000468179 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.04■□□□□ 0.48
COMMD3-206ENST00000468179 TMOD2Q9NZR1 351 aa18.04■□□□□ 0.48
COMMD3-206ENST00000468179 SLC10A3P09131 477 aa18.03■□□□□ 0.48
COMMD3-206ENST00000468179 OS9Q13438 667 aaPredicted RBP18.03■□□□□ 0.48
COMMD3-206ENST00000468179 SSH3Q8TE77 659 aa18.03■□□□□ 0.48
COMMD3-206ENST00000468179 ZDHHC15Q96MV8 337 aa18.03■□□□□ 0.48
COMMD3-206ENST00000468179 NEUROD6Q96NK8 337 aa18.03■□□□□ 0.48
COMMD3-206ENST00000468179 TDRD3Q9H7E2 651 aaKnown RBP18.03■□□□□ 0.48
COMMD3-206ENST00000468179 PCDHAC2Q9Y5I4 1007 aa18.03■□□□□ 0.48
COMMD3-206ENST00000468179 SALL1Q9NSC2 1324 aa18.03■□□□□ 0.48
COMMD3-206ENST00000468179 PAPPA2Q9BXP8 1791 aa18.03■□□□□ 0.48
COMMD3-206ENST00000468179 UNCXA6NJT0 531 aa18.02■□□□□ 0.48
COMMD3-206ENST00000468179 FAM155AB1AL88 458 aaPredicted RBP18.02■□□□□ 0.48
COMMD3-206ENST00000468179 UBE2Q2LH0YL09 131 aa18.02■□□□□ 0.48
COMMD3-206ENST00000468179 LDHBP07195 334 aaKnown RBP18.02■□□□□ 0.48
COMMD3-206ENST00000468179 PHKA1P46020 1223 aa18.02■□□□□ 0.48
COMMD3-206ENST00000468179 RASA3Q14644 834 aa18.02■□□□□ 0.48
COMMD3-206ENST00000468179 PANK1Q8TE04 598 aa18.02■□□□□ 0.48
COMMD3-206ENST00000468179 XAGE2Q96GT9 111 aa18.02■□□□□ 0.48
COMMD3-206ENST00000468179 SURF6O75683 361 aaKnown RBP18.01■□□□□ 0.47
COMMD3-206ENST00000468179 GRIK5Q16478 980 aa18.01■□□□□ 0.47
COMMD3-206ENST00000468179 COL13A1Q5TAT6 717 aaPredicted RBP18.01■□□□□ 0.47
COMMD3-206ENST00000468179 SPTY2D1Q68D10 685 aaPredicted RBP18.01■□□□□ 0.47
COMMD3-206ENST00000468179 SLF2Q8IX21 1173 aa18.01■□□□□ 0.47
COMMD3-206ENST00000468179 GPR108Q9NPR9 543 aa18.01■□□□□ 0.47
COMMD3-206ENST00000468179 DDX19BQ9UMR2 479 aa18.01■□□□□ 0.47
COMMD3-206ENST00000468179 PDS5AQ29RF7 1337 aaKnown RBP18.01■□□□□ 0.47
COMMD3-206ENST00000468179 THSD7BQ9C0I4 1608 aa18.01■□□□□ 0.47
COMMD3-206ENST00000468179 ADORA1P30542 326 aa18■□□□□ 0.47
COMMD3-206ENST00000468179 KIF23Q02241 960 aaPredicted RBP18■□□□□ 0.47
COMMD3-206ENST00000468179 HOOK2Q96ED9 719 aa18■□□□□ 0.47
COMMD3-206ENST00000468179 C1orf115Q9H7X2 142 aa18■□□□□ 0.47
COMMD3-206ENST00000468179 ANGEL1Q9UNK9 670 aaKnown RBP18■□□□□ 0.47
COMMD3-206ENST00000468179 HSPA8P11142 646 aaKnown RBP17.99■□□□□ 0.47
COMMD3-206ENST00000468179 IREB2P48200 963 aaKnown RBP17.99■□□□□ 0.47
COMMD3-206ENST00000468179 LBX1P52954 281 aa17.99■□□□□ 0.47
COMMD3-206ENST00000468179 PRKG1Q13976 671 aa17.99■□□□□ 0.47
COMMD3-206ENST00000468179 MAP3K11Q16584 847 aa17.99■□□□□ 0.47
COMMD3-206ENST00000468179 FKBP1CQ5VVH2 108 aa17.99■□□□□ 0.47
COMMD3-206ENST00000468179 MOB2Q70IA6 237 aa17.99■□□□□ 0.47
COMMD3-206ENST00000468179 RASAL3Q86YV0 1011 aa17.99■□□□□ 0.47
COMMD3-206ENST00000468179 TNS4Q8IZW8 715 aa17.99■□□□□ 0.47
COMMD3-206ENST00000468179 NOP58Q9Y2X3 529 aaKnown RBP17.99■□□□□ 0.47
COMMD3-206ENST00000468179 TCP10L2B9ZVM9 353 aa17.98■□□□□ 0.47
COMMD3-206ENST00000468179 UQCRFS1P1P0C7P4 283 aa17.98■□□□□ 0.47
COMMD3-206ENST00000468179 HSP90AB4PQ58FF6 505 aa17.98■□□□□ 0.47
COMMD3-206ENST00000468179 LDLRAD1Q5T700 205 aa17.98■□□□□ 0.47
COMMD3-206ENST00000468179 IFFO2Q5TF58 517 aa17.98■□□□□ 0.47
COMMD3-206ENST00000468179 ARAP2Q8WZ64 1704 aa17.98■□□□□ 0.47
COMMD3-206ENST00000468179 RASGRF1Q13972 1273 aa17.98■□□□□ 0.47
COMMD3-206ENST00000468179 CCDC158Q5M9N0 1113 aa17.98■□□□□ 0.47
COMMD3-206ENST00000468179 NBPF12Q5TAG4 269 aaPredicted RBP17.98■□□□□ 0.47
COMMD3-206ENST00000468179 APOBEC3HQ6NTF7 200 aaKnown RBP17.98■□□□□ 0.47
COMMD3-206ENST00000468179 CEP85Q6P2H3 762 aa17.98■□□□□ 0.47
COMMD3-206ENST00000468179 FAM83AQ86UY5 434 aa17.98■□□□□ 0.47
COMMD3-206ENST00000468179 ERC1Q8IUD2 1116 aa17.98■□□□□ 0.47
COMMD3-206ENST00000468179 SLC10A4Q96EP9 437 aa17.98■□□□□ 0.47
COMMD3-206ENST00000468179 SAGE1Q9NXZ1 904 aa17.98■□□□□ 0.47
COMMD3-206ENST00000468179 HMMRO75330 724 aa17.97■□□□□ 0.47
COMMD3-206ENST00000468179 PRDX5P30044 214 aa17.97■□□□□ 0.47
COMMD3-206ENST00000468179 PDE3AQ14432 1141 aa17.97■□□□□ 0.47
COMMD3-206ENST00000468179 DZIP1Q86YF9 867 aaKnown RBP17.97■□□□□ 0.47
COMMD3-206ENST00000468179 RPAP2Q8IXW5 612 aaPredicted RBP17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms