RNA–Protein interactions for RNA: ENST00000468149.5

MSL3-210, Transcript of MSL complex subunit 3, humanhuman

TSL 2

Gene MSL3, Length 1,646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-210ENST00000468149 NPDC1Q9NQX5 325 aaPredicted RBP8.83□□□□□ -1
MSL3-210ENST00000468149 ATP6V0A2Q9Y487 856 aa8.83□□□□□ -1
MSL3-210ENST00000468149 UTYO14607 1347 aa8.83□□□□□ -1
MSL3-210ENST00000468149 IPO8O15397 1037 aaKnown RBP8.83□□□□□ -1
MSL3-210ENST00000468149 GABBR2O75899 941 aa8.83□□□□□ -1
MSL3-210ENST00000468149 HDLBPQ00341 1268 aaKnown RBP8.83□□□□□ -1
MSL3-210ENST00000468149 QPCTQ16769 361 aa8.83□□□□□ -1
MSL3-210ENST00000468149 METTL3Q86U44 580 aaKnown RBP8.83□□□□□ -1
MSL3-210ENST00000468149 SP8Q8IXZ3 490 aa8.83□□□□□ -1
MSL3-210ENST00000468149 TTLL11Q8NHH1 800 aa8.83□□□□□ -1
MSL3-210ENST00000468149 MORC4Q8TE76 937 aa8.83□□□□□ -1
MSL3-210ENST00000468149 KCNB2Q92953 911 aa8.83□□□□□ -1
MSL3-210ENST00000468149 API5Q9BZZ5 524 aaKnown RBP8.83□□□□□ -1
MSL3-210ENST00000468149 C9orf78Q9NZ63 289 aaPredicted RBP8.83□□□□□ -1
MSL3-210ENST00000468149 NOB1Q9ULX3 412 aaKnown RBP8.83□□□□□ -1
MSL3-210ENST00000468149 DUOX1Q9NRD9 1551 aa8.82□□□□□ -1
MSL3-210ENST00000468149 ATP9BO43861 1147 aa8.82□□□□□ -1
MSL3-210ENST00000468149 LILRB3O75022 631 aa8.82□□□□□ -1
MSL3-210ENST00000468149 CCT4P50991 539 aaKnown RBP8.82□□□□□ -1
MSL3-210ENST00000468149 RPS8P62241 208 aaKnown RBP8.82□□□□□ -1
MSL3-210ENST00000468149 FKBP4Q02790 459 aaKnown RBP eCLIP8.82□□□□□ -1
MSL3-210ENST00000468149 RASSF7Q02833 373 aa8.82□□□□□ -1
MSL3-210ENST00000468149 CSPP1Q1MSJ5 1256 aa8.82□□□□□ -1
MSL3-210ENST00000468149 CCDC144BQ3MJ40 725 aa8.82□□□□□ -1
MSL3-210ENST00000468149 C9orf131Q5VYM1 1079 aa8.82□□□□□ -1
MSL3-210ENST00000468149 ASTLQ6HA08 431 aaPredicted RBP8.82□□□□□ -1
MSL3-210ENST00000468149 PLPP6Q8IY26 295 aa8.82□□□□□ -1
MSL3-210ENST00000468149 SPIRE2Q8WWL2 714 aa8.82□□□□□ -1
MSL3-210ENST00000468149 JARID2Q92833 1246 aaPredicted RBP8.82□□□□□ -1
MSL3-210ENST00000468149 CELF1Q92879 486 aaKnown RBP8.82□□□□□ -1
MSL3-210ENST00000468149 SPACA7Q96KW9 195 aa8.82□□□□□ -1
MSL3-210ENST00000468149 BACH2Q9BYV9 841 aa8.82□□□□□ -1
MSL3-210ENST00000468149 MAGEC2Q9UBF1 373 aaPredicted RBP8.82□□□□□ -1
MSL3-210ENST00000468149 NOVA2Q9UNW9 492 aaKnown RBP8.82□□□□□ -1
MSL3-210ENST00000468149 SCAMP3O14828 347 aaKnown RBP8.81□□□□□ -1
MSL3-210ENST00000468149 ATMINO43313 823 aaPredicted RBP8.81□□□□□ -1
MSL3-210ENST00000468149 CSF1RP07333 972 aa8.81□□□□□ -1
MSL3-210ENST00000468149 PRELPP51888 382 aa8.81□□□□□ -1
MSL3-210ENST00000468149 SETQ01105 290 aaPredicted RBP8.81□□□□□ -1
MSL3-210ENST00000468149 RSBN1LQ6PCB5 846 aaPredicted RBP8.81□□□□□ -1
MSL3-210ENST00000468149 OLFM4Q6UX06 510 aa8.81□□□□□ -1
MSL3-210ENST00000468149 ZNF784Q8NCA9 323 aaPredicted RBP8.81□□□□□ -1
MSL3-210ENST00000468149 TMC2Q8TDI7 906 aa8.81□□□□□ -1
MSL3-210ENST00000468149 VTI1AQ96AJ9 217 aa8.81□□□□□ -1
MSL3-210ENST00000468149 CDC5LQ99459 802 aaKnown RBP8.81□□□□□ -1
MSL3-210ENST00000468149 VPS33BQ9H267 617 aa8.81□□□□□ -1
MSL3-210ENST00000468149 RNF181Q9P0P0 153 aa8.81□□□□□ -1
MSL3-210ENST00000468149 WDR90Q96KV7 1748 aa8.81□□□□□ -1
MSL3-210ENST00000468149 BCAR3O75815 825 aa8.8□□□□□ -1
MSL3-210ENST00000468149 NBPF7P0C2Y1 421 aaPredicted RBP8.8□□□□□ -1
MSL3-210ENST00000468149 ATF7IPQ6VMQ6 1270 aa8.8□□□□□ -1
MSL3-210ENST00000468149 RTFDC1Q9BY42 306 aaPredicted RBP8.8□□□□□ -1
MSL3-210ENST00000468149 USP44Q9H0E7 712 aa8.8□□□□□ -1
MSL3-210ENST00000468149 SEC31BQ9NQW1 1179 aa8.8□□□□□ -1
MSL3-210ENST00000468149 MYH13Q9UKX3 1938 aa8.8□□□□□ -1
MSL3-210ENST00000468149 MAP4K4O95819 1239 aaPredicted RBP8.8□□□□□ -1
MSL3-210ENST00000468149 TRIM27P14373 513 aa8.8□□□□□ -1
MSL3-210ENST00000468149 ATN1P54259 1190 aaPredicted RBP8.8□□□□□ -1
MSL3-210ENST00000468149 FOXO4P98177 505 aa8.8□□□□□ -1
MSL3-210ENST00000468149 ANKRD18AQ8IVF6 992 aa8.8□□□□□ -1
MSL3-210ENST00000468149 MPNDQ8N594 471 aa8.8□□□□□ -1
MSL3-210ENST00000468149 SUPT20HQ8NEM7 779 aa8.8□□□□□ -1
MSL3-210ENST00000468149 DHX38Q92620 1227 aaKnown RBP8.8□□□□□ -1
MSL3-210ENST00000468149 GREM2Q9H772 168 aa8.8□□□□□ -1
MSL3-210ENST00000468149 CDHR5Q9HBB8 845 aa8.8□□□□□ -1
MSL3-210ENST00000468149 PRKAG2Q9UGJ0 569 aa8.8□□□□□ -1
MSL3-210ENST00000468149 SCN9AQ15858 1988 aa8.79□□□□□ -1
MSL3-210ENST00000468149 PARNO95453 639 aaKnown RBP8.79□□□□□ -1
MSL3-210ENST00000468149 OATP04181 439 aa8.79□□□□□ -1
MSL3-210ENST00000468149 IBSPP21815 317 aaPredicted RBP8.79□□□□□ -1
MSL3-210ENST00000468149 ITGA6P23229 1130 aa8.79□□□□□ -1
MSL3-210ENST00000468149 IARSP41252 1262 aaKnown RBP8.79□□□□□ -1
MSL3-210ENST00000468149 ZKSCAN2Q63HK3 967 aa8.79□□□□□ -1
MSL3-210ENST00000468149 INTS3Q68E01 1043 aaKnown RBP8.79□□□□□ -1
MSL3-210ENST00000468149 DPP8Q6V1X1 898 aaPredicted RBP8.79□□□□□ -1
MSL3-210ENST00000468149 FRAT1Q92837 279 aaPredicted RBP8.79□□□□□ -1
MSL3-210ENST00000468149 PKNOX2Q96KN3 472 aa8.79□□□□□ -1
MSL3-210ENST00000468149 CCDC85AQ96PX6 553 aaPredicted RBP8.79□□□□□ -1
MSL3-210ENST00000468149 BSDC1Q9NW68 430 aaPredicted RBP8.79□□□□□ -1
MSL3-210ENST00000468149 HDAC5Q9UQL6 1122 aa8.79□□□□□ -1
MSL3-210ENST00000468149 ZNF646O15015 1829 aaPredicted RBP8.78□□□□□ -1
MSL3-210ENST00000468149 KDM2BQ8NHM5 1336 aa8.78□□□□□ -1
MSL3-210ENST00000468149 MAFGO15525 162 aa8.78□□□□□ -1
MSL3-210ENST00000468149 ATP2B1P20020 1258 aa8.78□□□□□ -1
MSL3-210ENST00000468149 IGHMBP2P38935 993 aaKnown RBP8.78□□□□□ -1
MSL3-210ENST00000468149 RAD51AP2Q09MP3 1159 aa8.78□□□□□ -1
MSL3-210ENST00000468149 SEMA3FQ13275 785 aa8.78□□□□□ -1
MSL3-210ENST00000468149 IFIT5Q13325 482 aaKnown RBP8.78□□□□□ -1
MSL3-210ENST00000468149 FAM161AQ3B820 660 aa8.78□□□□□ -1
MSL3-210ENST00000468149 RABL6Q3YEC7 729 aaPredicted RBP8.78□□□□□ -1
MSL3-210ENST00000468149 IER5LQ5T953 404 aa8.78□□□□□ -1
MSL3-210ENST00000468149 DPY19L2Q6NUT2 758 aa8.78□□□□□ -1
MSL3-210ENST00000468149 KAZALD1Q96I82 304 aa8.78□□□□□ -1
MSL3-210ENST00000468149 ZNF277Q9NRM2 450 aaPredicted RBP8.78□□□□□ -1
MSL3-210ENST00000468149 NSFL1CQ9UNZ2 370 aaKnown RBP8.78□□□□□ -1
MSL3-210ENST00000468149 COL4A5P29400 1685 aa8.78□□□□□ -1
MSL3-210ENST00000468149 A0A0U1RQG5 324 aaPredicted RBP8.77□□□□□ -1.01
MSL3-210ENST00000468149 ANKRD18BA2A2Z9 1011 aa8.77□□□□□ -1.01
MSL3-210ENST00000468149 GLTPD2A6NH11 291 aa8.77□□□□□ -1.01
MSL3-210ENST00000468149 PEX14O75381 377 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms