RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 RFX7Q2KHR2 1363 aa8.28□□□□□ -1.08
SCAF4-204ENST00000467731 MAP3K12Q12852 859 aa8.28□□□□□ -1.08
SCAF4-204ENST00000467731 DACT2Q5SW24 774 aa8.28□□□□□ -1.08
SCAF4-204ENST00000467731 CWC27Q6UX04 472 aaKnown RBP8.28□□□□□ -1.08
SCAF4-204ENST00000467731 MAGEB6Q8N7X4 407 aa8.28□□□□□ -1.08
SCAF4-204ENST00000467731 FAM227BQ96M60 508 aa8.28□□□□□ -1.08
SCAF4-204ENST00000467731 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.28□□□□□ -1.081e-8■■□□□ 13.3
SCAF4-204ENST00000467731 DIAPH3Q9NSV4 1193 aa8.28□□□□□ -1.08
SCAF4-204ENST00000467731 A0A0D9SFI3 127 aa8.28□□□□□ -1.08
SCAF4-204ENST00000467731 PSMD14O00487 310 aa8.28□□□□□ -1.08
SCAF4-204ENST00000467731 GRIN3BO60391 1043 aa8.28□□□□□ -1.08
SCAF4-204ENST00000467731 LDHBP07195 334 aaKnown RBP8.28□□□□□ -1.08
SCAF4-204ENST00000467731 PDE6AP16499 860 aa8.28□□□□□ -1.08
SCAF4-204ENST00000467731 ADD2P35612 726 aa8.28□□□□□ -1.08
SCAF4-204ENST00000467731 MECOMQ03112 1051 aa8.28□□□□□ -1.08
SCAF4-204ENST00000467731 ZNF384Q8TF68 577 aa8.28□□□□□ -1.08
SCAF4-204ENST00000467731 NSUN4Q96CB9 384 aaKnown RBP8.28□□□□□ -1.08
SCAF4-204ENST00000467731 NAP1L5Q96NT1 182 aaPredicted RBP8.28□□□□□ -1.08
SCAF4-204ENST00000467731 IL25Q9H293 177 aa8.28□□□□□ -1.08
SCAF4-204ENST00000467731 ZNF532Q9HCE3 1301 aa8.27□□□□□ -1.09
SCAF4-204ENST00000467731 ADAMTSL1Q8N6G6 1762 aa8.27□□□□□ -1.09
SCAF4-204ENST00000467731 FZD9O00144 591 aa8.27□□□□□ -1.09
SCAF4-204ENST00000467731 HIP1O00291 1037 aa8.27□□□□□ -1.09
SCAF4-204ENST00000467731 RNF113AO15541 343 aaKnown RBP8.27□□□□□ -1.09
SCAF4-204ENST00000467731 CXCL9Q07325 125 aa8.27□□□□□ -1.09
SCAF4-204ENST00000467731 NMIQ13287 307 aaPredicted RBP8.27□□□□□ -1.09
SCAF4-204ENST00000467731 LRRFIP1Q32MZ4 808 aaKnown RBP8.27□□□□□ -1.09
SCAF4-204ENST00000467731 SPTY2D1Q68D10 685 aaPredicted RBP8.27□□□□□ -1.09
SCAF4-204ENST00000467731 CASC1Q6TDU7 716 aa8.27□□□□□ -1.09
SCAF4-204ENST00000467731 TCRBV5S4A2TA0A5A2 114 aa8.27□□□□□ -1.09
SCAF4-204ENST00000467731 F8W031 263 aaPredicted RBP8.27□□□□□ -1.09
SCAF4-204ENST00000467731 ZFYP08048 801 aaPredicted RBP8.27□□□□□ -1.09
SCAF4-204ENST00000467731 ZSCAN25Q6NSZ9 544 aa8.27□□□□□ -1.09
SCAF4-204ENST00000467731 DZIP1Q86YF9 867 aaKnown RBP8.27□□□□□ -1.09
SCAF4-204ENST00000467731 SEC62Q99442 399 aaKnown RBP8.27□□□□□ -1.09
SCAF4-204ENST00000467731 RNF181Q9P0P0 153 aa8.27□□□□□ -1.09
SCAF4-204ENST00000467731 VIL1P09327 827 aaKnown RBP8.26□□□□□ -1.09
SCAF4-204ENST00000467731 DIXDC1Q155Q3 683 aa8.26□□□□□ -1.09
SCAF4-204ENST00000467731 CIAPIN1Q6FI81 312 aa8.26□□□□□ -1.09
SCAF4-204ENST00000467731 ADGRA1Q86SQ6 560 aa8.26□□□□□ -1.09
SCAF4-204ENST00000467731 TICAM2Q86XR7 235 aa8.26□□□□□ -1.09
SCAF4-204ENST00000467731 KIAA0825Q8IV33 1275 aa8.26□□□□□ -1.09
SCAF4-204ENST00000467731 OSBP2Q969R2 916 aa8.26□□□□□ -1.09
SCAF4-204ENST00000467731 PUS7LQ9H0K6 701 aaKnown RBP8.26□□□□□ -1.09
SCAF4-204ENST00000467731 ZBTB12Q9Y330 459 aaPredicted RBP8.26□□□□□ -1.09
SCAF4-204ENST00000467731 FKBP1AP62942 108 aaKnown RBP8.26□□□□□ -1.09
SCAF4-204ENST00000467731 UBE3CQ15386 1083 aa8.26□□□□□ -1.09
SCAF4-204ENST00000467731 ZMYM1Q5SVZ6 1142 aa8.26□□□□□ -1.09
SCAF4-204ENST00000467731 C9orf131Q5VYM1 1079 aa8.26□□□□□ -1.09
SCAF4-204ENST00000467731 NAA16Q6N069 864 aaPredicted RBP8.26□□□□□ -1.09
SCAF4-204ENST00000467731 RSBN1LQ6PCB5 846 aaPredicted RBP8.26□□□□□ -1.09
SCAF4-204ENST00000467731 APPBP2Q92624 585 aa8.26□□□□□ -1.09
SCAF4-204ENST00000467731 TTF2Q9UNY4 1162 aaKnown RBP8.26□□□□□ -1.09
SCAF4-204ENST00000467731 SUGT1Q9Y2Z0 365 aa8.26□□□□□ -1.09
SCAF4-204ENST00000467731 ZNF541Q9H0D2 1346 aa8.26□□□□□ -1.09
SCAF4-204ENST00000467731 SEC24BO95487 1268 aa8.25□□□□□ -1.09
SCAF4-204ENST00000467731 EIF6P56537 245 aaKnown RBP8.25□□□□□ -1.09
SCAF4-204ENST00000467731 NBR1Q14596 966 aa8.25□□□□□ -1.09
SCAF4-204ENST00000467731 ZNF589Q86UQ0 364 aaPredicted RBP8.25□□□□□ -1.09
SCAF4-204ENST00000467731 ESYT1Q9BSJ8 1104 aa8.25□□□□□ -1.09
SCAF4-204ENST00000467731 BACH2Q9BYV9 841 aa8.25□□□□□ -1.09
SCAF4-204ENST00000467731 MAST3O60307 1309 aa8.25□□□□□ -1.09
SCAF4-204ENST00000467731 MYO3BQ8WXR4 1341 aa8.25□□□□□ -1.09
SCAF4-204ENST00000467731 M0R2C6 588 aa8.25□□□□□ -1.09
SCAF4-204ENST00000467731 SGSM2O43147 1006 aa8.25□□□□□ -1.09
SCAF4-204ENST00000467731 CYP7A1P22680 504 aa8.25□□□□□ -1.09
SCAF4-204ENST00000467731 SCNN1DP51172 638 aa8.25□□□□□ -1.09
SCAF4-204ENST00000467731 CCDC129Q6ZRS4 1044 aa8.25□□□□□ -1.09
SCAF4-204ENST00000467731 RUFY2Q8WXA3 655 aa8.25□□□□□ -1.09
SCAF4-204ENST00000467731 CDK5RAP2Q96SN8 1893 aa8.25□□□□□ -1.09
SCAF4-204ENST00000467731 TNIP1Q15025 636 aa8.25□□□□□ -1.09
SCAF4-204ENST00000467731 MCMDC2Q4G0Z9 681 aa8.25□□□□□ -1.09
SCAF4-204ENST00000467731 MIGA1Q8NAN2 632 aa8.25□□□□□ -1.09
SCAF4-204ENST00000467731 HELLSQ9NRZ9 838 aa8.25□□□□□ -1.09
SCAF4-204ENST00000467731 NAP1L2Q9ULW6 460 aaPredicted RBP8.25□□□□□ -1.09
SCAF4-204ENST00000467731 GJA3Q9Y6H8 435 aa8.25□□□□□ -1.09
SCAF4-204ENST00000467731 IGSF3O75054 1194 aa8.24□□□□□ -1.09
SCAF4-204ENST00000467731 AGBL3Q8NEM8 1001 aa8.24□□□□□ -1.09
SCAF4-204ENST00000467731 GMLQ99445 158 aa8.24□□□□□ -1.09
SCAF4-204ENST00000467731 AATFQ9NY61 560 aaKnown RBP eCLIP8.24□□□□□ -1.09
SCAF4-204ENST00000467731 MROH7-TTC4A0A0A0MT08 1334 aa8.24□□□□□ -1.09
SCAF4-204ENST00000467731 RAD50Q92878 1312 aa8.24□□□□□ -1.09
SCAF4-204ENST00000467731 GPAA1O43292 621 aa8.24□□□□□ -1.09
SCAF4-204ENST00000467731 MFAP1P55081 439 aaKnown RBP8.24□□□□□ -1.09
SCAF4-204ENST00000467731 SAMD1Q6SPF0 538 aaPredicted RBP8.24□□□□□ -1.09
SCAF4-204ENST00000467731 AIDAQ96BJ3 306 aa8.24□□□□□ -1.09
SCAF4-204ENST00000467731 CCDC171Q6TFL3 1326 aa8.24□□□□□ -1.09
SCAF4-204ENST00000467731 ECM29Q5VYK3 1845 aa8.23□□□□□ -1.09
SCAF4-204ENST00000467731 GSTO1P78417 241 aa8.23□□□□□ -1.09
SCAF4-204ENST00000467731 TMED8Q6PL24 325 aaPredicted RBP8.23□□□□□ -1.09
SCAF4-204ENST00000467731 RIOK1Q9BRS2 568 aaKnown RBP8.23□□□□□ -1.09
SCAF4-204ENST00000467731 BAZ2AQ9UIF9 1905 aaKnown RBP8.23□□□□□ -1.09
SCAF4-204ENST00000467731 MBD4O95243 580 aa8.23□□□□□ -1.09
SCAF4-204ENST00000467731 CRKP46108 304 aa8.23□□□□□ -1.09
SCAF4-204ENST00000467731 DYNLL1P63167 89 aaKnown RBP8.23□□□□□ -1.09
SCAF4-204ENST00000467731 SLF2Q8IX21 1173 aa8.23□□□□□ -1.09
SCAF4-204ENST00000467731 GPC2Q8N158 579 aa8.23□□□□□ -1.09
SCAF4-204ENST00000467731 LCORLQ8N3X6 602 aa8.23□□□□□ -1.09
SCAF4-204ENST00000467731 OGFOD1Q8N543 542 aa8.23□□□□□ -1.09
SCAF4-204ENST00000467731 TEKT1Q969V4 418 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms