RNA–Protein interactions for RNA: ENST00000467366.1

PTPRE-206, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3

Gene PTPRE, Length 338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-206ENST00000467366 TTLL5Q6EMB2 1281 aa8.38□□□□□ -1.07
PTPRE-206ENST00000467366 TXNRD3Q86VQ6 643 aa8.38□□□□□ -1.07
PTPRE-206ENST00000467366 CDAN1Q8IWY9 1227 aa8.38□□□□□ -1.07
PTPRE-206ENST00000467366 SLAIN1Q8ND83 568 aa8.38□□□□□ -1.07
PTPRE-206ENST00000467366 ISCA1Q9BUE6 129 aa8.38□□□□□ -1.07
PTPRE-206ENST00000467366 VEZTQ9HBM0 779 aa8.38□□□□□ -1.07
PTPRE-206ENST00000467366 PER1O15534 1290 aaPredicted RBP8.37□□□□□ -1.07
PTPRE-206ENST00000467366 ADCY3O60266 1144 aa8.37□□□□□ -1.07
PTPRE-206ENST00000467366 ELNP15502 786 aa8.37□□□□□ -1.07
PTPRE-206ENST00000467366 ZNF697Q5TEC3 545 aa8.37□□□□□ -1.07
PTPRE-206ENST00000467366 MTMR14Q8NCE2 650 aa8.37□□□□□ -1.07
PTPRE-206ENST00000467366 HELBQ8NG08 1087 aaPredicted RBP8.37□□□□□ -1.07
PTPRE-206ENST00000467366 MYLIPQ8WY64 445 aa8.37□□□□□ -1.07
PTPRE-206ENST00000467366 PRMT6Q96LA8 375 aaPredicted RBP8.37□□□□□ -1.07
PTPRE-206ENST00000467366 COA1Q9GZY4 146 aa8.37□□□□□ -1.07
PTPRE-206ENST00000467366 CRISPLD2Q9H0B8 497 aa8.37□□□□□ -1.07
PTPRE-206ENST00000467366 ZCCHC17Q9NP64 241 aaKnown RBP8.37□□□□□ -1.07
PTPRE-206ENST00000467366 PAK6Q9NQU5 681 aaPredicted RBP8.37□□□□□ -1.07
PTPRE-206ENST00000467366 LAMA2P24043 3122 aaKnown RBP8.37□□□□□ -1.07
PTPRE-206ENST00000467366 ARAP2Q8WZ64 1704 aa8.37□□□□□ -1.07
PTPRE-206ENST00000467366 FAM205AQ6ZU69 1335 aa8.36□□□□□ -1.07
PTPRE-206ENST00000467366 ADGRA2Q96PE1 1338 aa8.36□□□□□ -1.07
PTPRE-206ENST00000467366 INHAP05111 366 aa8.36□□□□□ -1.07
PTPRE-206ENST00000467366 HSPA5P11021 654 aaKnown RBP8.36□□□□□ -1.07
PTPRE-206ENST00000467366 CETPP11597 493 aa8.36□□□□□ -1.07
PTPRE-206ENST00000467366 CAPN2P17655 700 aa8.36□□□□□ -1.07
PTPRE-206ENST00000467366 GTF2IP78347 998 aa8.36□□□□□ -1.07
PTPRE-206ENST00000467366 CNGB1Q14028 1251 aaPredicted RBP8.36□□□□□ -1.07
PTPRE-206ENST00000467366 TJAP1Q5JTD0 557 aa8.36□□□□□ -1.07
PTPRE-206ENST00000467366 DHX37Q8IY37 1157 aaKnown RBP8.36□□□□□ -1.07
PTPRE-206ENST00000467366 CERS5Q8N5B7 392 aa8.36□□□□□ -1.07
PTPRE-206ENST00000467366 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.36□□□□□ -1.07
PTPRE-206ENST00000467366 CCDC85AQ96PX6 553 aaPredicted RBP8.36□□□□□ -1.07
PTPRE-206ENST00000467366 CDH23Q9H251 3354 aa8.35□□□□□ -1.07
PTPRE-206ENST00000467366 SYNGAP1Q96PV0 1343 aa8.35□□□□□ -1.07
PTPRE-206ENST00000467366 SPDYE2BA6NHP3 402 aa8.35□□□□□ -1.07
PTPRE-206ENST00000467366 SPDYE5A6NIY4 337 aa8.35□□□□□ -1.07
PTPRE-206ENST00000467366 IRF6O14896 467 aa8.35□□□□□ -1.07
PTPRE-206ENST00000467366 SPDYE6P0CI01 402 aa8.35□□□□□ -1.07
PTPRE-206ENST00000467366 U2AF1L5P0DN76 240 aaPredicted RBP8.35□□□□□ -1.07
PTPRE-206ENST00000467366 KLRK1P26718 216 aa8.35□□□□□ -1.07
PTPRE-206ENST00000467366 MAP3K9P80192 1104 aa8.35□□□□□ -1.07
PTPRE-206ENST00000467366 MDM2Q00987 491 aaPredicted RBP8.35□□□□□ -1.07
PTPRE-206ENST00000467366 U2AF1Q01081 240 aaKnown RBP eCLIP8.35□□□□□ -1.07
PTPRE-206ENST00000467366 CFAP100Q494V2 611 aa8.35□□□□□ -1.07
PTPRE-206ENST00000467366 TEPSINQ96N21 525 aa8.35□□□□□ -1.07
PTPRE-206ENST00000467366 SEMA6BQ9H3T3 888 aa8.35□□□□□ -1.07
PTPRE-206ENST00000467366 SALL2Q9Y467 1007 aaPredicted RBP8.35□□□□□ -1.07
PTPRE-206ENST00000467366 TTC28Q96AY4 2481 aa8.34□□□□□ -1.07
PTPRE-206ENST00000467366 F8W031 263 aaPredicted RBP8.34□□□□□ -1.07
PTPRE-206ENST00000467366 MYO1BO43795 1136 aa8.34□□□□□ -1.07
PTPRE-206ENST00000467366 FLT3LGP49771 235 aa8.34□□□□□ -1.07
PTPRE-206ENST00000467366 CCT4P50991 539 aaKnown RBP8.34□□□□□ -1.07
PTPRE-206ENST00000467366 CCDC152Q4G0S7 254 aa8.34□□□□□ -1.07
PTPRE-206ENST00000467366 ANKRD18AQ8IVF6 992 aa8.34□□□□□ -1.07
PTPRE-206ENST00000467366 PLBD2Q8NHP8 589 aa8.34□□□□□ -1.07
PTPRE-206ENST00000467366 SNX27Q96L92 541 aa8.34□□□□□ -1.07
PTPRE-206ENST00000467366 MINPP1Q9UNW1 487 aa8.34□□□□□ -1.07
PTPRE-206ENST00000467366 CSADQ9Y600 493 aa8.34□□□□□ -1.07
PTPRE-206ENST00000467366 SNCAIPQ9Y6H5 919 aa8.34□□□□□ -1.07
PTPRE-206ENST00000467366 PDHXO00330 501 aa8.33□□□□□ -1.08
PTPRE-206ENST00000467366 FCGRTP55899 365 aa8.33□□□□□ -1.08
PTPRE-206ENST00000467366 EIF4G2P78344 907 aaKnown RBP eCLIP8.33□□□□□ -1.08
PTPRE-206ENST00000467366 SNAPC2Q13487 334 aa8.33□□□□□ -1.08
PTPRE-206ENST00000467366 ERO1BQ86YB8 467 aa8.33□□□□□ -1.08
PTPRE-206ENST00000467366 ANKLE1Q8NAG6 615 aa8.33□□□□□ -1.08
PTPRE-206ENST00000467366 USP38Q8NB14 1042 aa8.33□□□□□ -1.08
PTPRE-206ENST00000467366 PXYLP1Q8TE99 480 aa8.33□□□□□ -1.08
PTPRE-206ENST00000467366 JARID2Q92833 1246 aaPredicted RBP8.33□□□□□ -1.08
PTPRE-206ENST00000467366 NBPF3Q9H094 633 aa8.33□□□□□ -1.08
PTPRE-206ENST00000467366 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.33□□□□□ -1.08
PTPRE-206ENST00000467366 TTYH1Q9H313 450 aaPredicted RBP8.33□□□□□ -1.08
PTPRE-206ENST00000467366 C11orf49Q9H6J7 331 aa8.33□□□□□ -1.08
PTPRE-206ENST00000467366 TSPYL4Q9UJ04 414 aa8.33□□□□□ -1.08
PTPRE-206ENST00000467366 PFASO15067 1338 aa8.32□□□□□ -1.08
PTPRE-206ENST00000467366 PDE8AO60658 829 aa8.32□□□□□ -1.08
PTPRE-206ENST00000467366 BCRP11274 1271 aa8.32□□□□□ -1.08
PTPRE-206ENST00000467366 FOSL2P15408 326 aa8.32□□□□□ -1.08
PTPRE-206ENST00000467366 TRIM28Q13263 835 aaKnown RBP8.32□□□□□ -1.08
PTPRE-206ENST00000467366 ANKRD23Q86SG2 305 aa8.32□□□□□ -1.08
PTPRE-206ENST00000467366 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.32□□□□□ -1.08
PTPRE-206ENST00000467366 ZBTB38Q8NAP3 1195 aaPredicted RBP8.32□□□□□ -1.08
PTPRE-206ENST00000467366 ZKSCAN4Q969J2 545 aaPredicted RBP8.32□□□□□ -1.08
PTPRE-206ENST00000467366 TMEM39BQ9GZU3 492 aa8.32□□□□□ -1.08
PTPRE-206ENST00000467366 CHPF2Q9P2E5 772 aa8.32□□□□□ -1.08
PTPRE-206ENST00000467366 NUDCQ9Y266 331 aa8.32□□□□□ -1.08
PTPRE-206ENST00000467366 RBM5P52756 815 aaKnown RBP eCLIP8.31□□□□□ -1.08
PTPRE-206ENST00000467366 PPIL2Q13356 520 aa8.31□□□□□ -1.08
PTPRE-206ENST00000467366 SPDYE2Q495Y8 402 aa8.31□□□□□ -1.08
PTPRE-206ENST00000467366 CFAP53Q96M91 514 aa8.31□□□□□ -1.08
PTPRE-206ENST00000467366 TDRD3Q9H7E2 651 aaKnown RBP8.31□□□□□ -1.08
PTPRE-206ENST00000467366 CD209Q9NNX6 404 aa8.31□□□□□ -1.08
PTPRE-206ENST00000467366 BSDC1Q9NW68 430 aaPredicted RBP8.31□□□□□ -1.08
PTPRE-206ENST00000467366 ZNF70Q9UC06 446 aaPredicted RBP8.31□□□□□ -1.08
PTPRE-206ENST00000467366 LEMD3Q9Y2U8 911 aa8.31□□□□□ -1.08
PTPRE-206ENST00000467366 LTBP2Q14767 1821 aa8.31□□□□□ -1.08
PTPRE-206ENST00000467366 MAST2Q6P0Q8 1798 aa8.3□□□□□ -1.08
PTPRE-206ENST00000467366 TCP10L2B9ZVM9 353 aa8.3□□□□□ -1.08
PTPRE-206ENST00000467366 CYP2C8P10632 490 aa8.3□□□□□ -1.08
PTPRE-206ENST00000467366 IRF5Q13568 498 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms