RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 COL17A1Q9UMD9 1497 aaPredicted RBP6.78□□□□□ -1.32
VPS50-209ENST00000467326 TMEM238LA0A1B0GVL6 79 aa6.77□□□□□ -1.33
VPS50-209ENST00000467326 EIF4EBP3O60516 100 aaPredicted RBP6.77□□□□□ -1.33
VPS50-209ENST00000467326 GSTM4Q03013 218 aa6.77□□□□□ -1.33
VPS50-209ENST00000467326 PTPN12Q05209 780 aaKnown RBP6.77□□□□□ -1.33
VPS50-209ENST00000467326 ALG1LQ6GMV1 187 aa6.77□□□□□ -1.33
VPS50-209ENST00000467326 KIAA1211Q6ZU35 1233 aa6.77□□□□□ -1.33
VPS50-209ENST00000467326 HOMEZQ8IX15 550 aa6.77□□□□□ -1.33
VPS50-209ENST00000467326 SETDB2Q96T68 719 aa6.77□□□□□ -1.33
VPS50-209ENST00000467326 BCO2Q9BYV7 579 aa6.77□□□□□ -1.33
VPS50-209ENST00000467326 CEP41Q9BYV8 373 aa6.77□□□□□ -1.33
VPS50-209ENST00000467326 ANKRD33BA6NCL7 494 aa6.76□□□□□ -1.33
VPS50-209ENST00000467326 B3GALT4O96024 378 aa6.76□□□□□ -1.33
VPS50-209ENST00000467326 FCGRTP55899 365 aa6.76□□□□□ -1.33
VPS50-209ENST00000467326 ZNF423Q2M1K9 1284 aa6.76□□□□□ -1.33
VPS50-209ENST00000467326 DTHD1Q6ZMT9 781 aa6.76□□□□□ -1.33
VPS50-209ENST00000467326 DZIP1LQ8IYY4 767 aaKnown RBP6.76□□□□□ -1.33
VPS50-209ENST00000467326 RUSC1Q9BVN2 902 aa6.76□□□□□ -1.33
VPS50-209ENST00000467326 RNF208Q9H0X6 261 aa6.76□□□□□ -1.33
VPS50-209ENST00000467326 GZF1Q9H116 711 aaPredicted RBP6.76□□□□□ -1.33
VPS50-209ENST00000467326 PCMTD2Q9NV79 361 aa6.76□□□□□ -1.33
VPS50-209ENST00000467326 LOC100289279A0A1B0GTE1 492 aa6.75□□□□□ -1.33
VPS50-209ENST00000467326 LDHBP07195 334 aaKnown RBP6.75□□□□□ -1.33
VPS50-209ENST00000467326 RPS26P11Q5JNZ5 115 aaPredicted RBP6.75□□□□□ -1.33
VPS50-209ENST00000467326 DDX54Q8TDD1 881 aaKnown RBP6.75□□□□□ -1.33
VPS50-209ENST00000467326 WWC3Q9ULE0 1092 aa6.75□□□□□ -1.33
VPS50-209ENST00000467326 XRCC5P13010 732 aaKnown RBP6.74□□□□□ -1.33
VPS50-209ENST00000467326 CCDC27Q2M243 656 aa6.74□□□□□ -1.33
VPS50-209ENST00000467326 ANKRD34AQ69YU3 496 aa6.74□□□□□ -1.33
VPS50-209ENST00000467326 NXPE4Q6UWF7 544 aa6.74□□□□□ -1.33
VPS50-209ENST00000467326 DNAJC14Q6Y2X3 702 aaPredicted RBP6.74□□□□□ -1.33
VPS50-209ENST00000467326 NRSN2Q9GZP1 204 aa6.74□□□□□ -1.33
VPS50-209ENST00000467326 PPP4R2Q9NY27 417 aa6.74□□□□□ -1.33
VPS50-209ENST00000467326 SPG7Q9UQ90 795 aa6.74□□□□□ -1.33
VPS50-209ENST00000467326 IRAK1P51617 712 aa6.73□□□□□ -1.33
VPS50-209ENST00000467326 FAAP100Q0VG06 881 aa6.73□□□□□ -1.33
VPS50-209ENST00000467326 COL19A1Q14993 1142 aa6.73□□□□□ -1.33
VPS50-209ENST00000467326 UVSSAQ2YD98 709 aa6.73□□□□□ -1.33
VPS50-209ENST00000467326 FDX2Q6P4F2 183 aa6.73□□□□□ -1.33
VPS50-209ENST00000467326 NPAS4Q8IUM7 802 aa6.73□□□□□ -1.33
VPS50-209ENST00000467326 FMNL2Q96PY5 1086 aa6.73□□□□□ -1.33
VPS50-209ENST00000467326 TRIM56Q9BRZ2 755 aaKnown RBP6.73□□□□□ -1.33
VPS50-209ENST00000467326 SRCIN1Q9C0H9 1055 aa6.73□□□□□ -1.33
VPS50-209ENST00000467326 ZFYVE1Q9HBF4 777 aa6.73□□□□□ -1.33
VPS50-209ENST00000467326 CYP11A1P05108 521 aa6.72□□□□□ -1.33
VPS50-209ENST00000467326 MAOBP27338 520 aa6.72□□□□□ -1.33
VPS50-209ENST00000467326 GSTT1P30711 240 aa6.72□□□□□ -1.33
VPS50-209ENST00000467326 EAPPQ56P03 285 aaPredicted RBP6.72□□□□□ -1.33
VPS50-209ENST00000467326 HP1BP3Q5SSJ5 553 aaPredicted RBP6.72□□□□□ -1.33
VPS50-209ENST00000467326 UTP4Q969X6 686 aaKnown RBP6.72□□□□□ -1.33
VPS50-209ENST00000467326 GPN3Q9UHW5 284 aaPredicted RBP6.72□□□□□ -1.33
VPS50-209ENST00000467326 GIPC1O14908 333 aa6.71□□□□□ -1.34
VPS50-209ENST00000467326 PRPF40AO75400 957 aaKnown RBP6.71□□□□□ -1.34
VPS50-209ENST00000467326 PREPP48147 710 aa6.71□□□□□ -1.34
VPS50-209ENST00000467326 FGD1P98174 961 aa6.71□□□□□ -1.34
VPS50-209ENST00000467326 AP3B2Q13367 1082 aa6.71□□□□□ -1.34
VPS50-209ENST00000467326 POU4F3Q15319 338 aa6.71□□□□□ -1.34
VPS50-209ENST00000467326 NUTM2GQ5VZR2 741 aa6.71□□□□□ -1.34
VPS50-209ENST00000467326 C3orf58Q8NDZ4 430 aa6.71□□□□□ -1.34
VPS50-209ENST00000467326 FAM46AQ96IP4 442 aaKnown RBP6.71□□□□□ -1.34
VPS50-209ENST00000467326 UBL7Q96S82 380 aaPredicted RBP6.71□□□□□ -1.34
VPS50-209ENST00000467326 CORO1BQ9BR76 489 aa6.71□□□□□ -1.34
VPS50-209ENST00000467326 TMPRSS13Q9BYE2 586 aa6.71□□□□□ -1.34
VPS50-209ENST00000467326 AKAP2Q9Y2D5 859 aa6.71□□□□□ -1.34
VPS50-209ENST00000467326 ZBTB7CA1YPR0 619 aa6.7□□□□□ -1.34
VPS50-209ENST00000467326 SART1O43290 800 aaKnown RBP6.7□□□□□ -1.34
VPS50-209ENST00000467326 DLGAP3O95886 979 aa6.7□□□□□ -1.34
VPS50-209ENST00000467326 GNA15P30679 374 aa6.7□□□□□ -1.34
VPS50-209ENST00000467326 ZNF157P51786 506 aaPredicted RBP6.7□□□□□ -1.34
VPS50-209ENST00000467326 PPP2R3AQ06190 1150 aa6.7□□□□□ -1.34
VPS50-209ENST00000467326 PRR23CQ6ZRP0 262 aa6.7□□□□□ -1.34
VPS50-209ENST00000467326 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.7□□□□□ -1.34
VPS50-209ENST00000467326 OSBPL7Q9BZF2 842 aa6.7□□□□□ -1.34
VPS50-209ENST00000467326 C12orf49Q9H741 205 aa6.7□□□□□ -1.34
VPS50-209ENST00000467326 SUGCTQ9HAC7 445 aa6.7□□□□□ -1.34
VPS50-209ENST00000467326 CYP4F12Q9HCS2 524 aa6.7□□□□□ -1.34
VPS50-209ENST00000467326 MEGF11A6BM72 1044 aa6.69□□□□□ -1.34
VPS50-209ENST00000467326 GAS2O43903 313 aaKnown RBP6.69□□□□□ -1.34
VPS50-209ENST00000467326 ECEL1O95672 775 aa6.69□□□□□ -1.34
VPS50-209ENST00000467326 CTSBP07858 339 aa6.69□□□□□ -1.34
VPS50-209ENST00000467326 ARMC10Q8N2F6 343 aa6.69□□□□□ -1.34
VPS50-209ENST00000467326 SMG8Q8ND04 991 aaKnown RBP6.69□□□□□ -1.34
VPS50-209ENST00000467326 MYRFLQ96LU7 910 aa6.69□□□□□ -1.34
VPS50-209ENST00000467326 DUSP9Q99956 384 aaKnown RBP6.69□□□□□ -1.34
VPS50-209ENST00000467326 TMEM39AQ9NV64 488 aa6.69□□□□□ -1.34
VPS50-209ENST00000467326 FAM8A1Q9UBU6 413 aa6.69□□□□□ -1.34
VPS50-209ENST00000467326 PPM1HQ9ULR3 514 aa6.69□□□□□ -1.34
VPS50-209ENST00000467326 GSC2O15499 205 aa6.68□□□□□ -1.34
VPS50-209ENST00000467326 DHX15O43143 795 aaKnown RBP6.68□□□□□ -1.34
VPS50-209ENST00000467326 TIAF1O95411 115 aa6.68□□□□□ -1.34
VPS50-209ENST00000467326 USP17L7P0C7H9 530 aa6.68□□□□□ -1.34
VPS50-209ENST00000467326 PDE3AQ14432 1141 aa6.68□□□□□ -1.34
VPS50-209ENST00000467326 FRMD6Q96NE9 622 aa6.68□□□□□ -1.34
VPS50-209ENST00000467326 ADH5P11766 374 aa6.67□□□□□ -1.34
VPS50-209ENST00000467326 ERCC3P19447 782 aa6.67□□□□□ -1.34
VPS50-209ENST00000467326 EXOSC6Q5RKV6 272 aaKnown RBP6.67□□□□□ -1.34
VPS50-209ENST00000467326 TPTE2Q6XPS3 522 aa6.67□□□□□ -1.34
VPS50-209ENST00000467326 SULF2Q8IWU5 870 aa6.67□□□□□ -1.34
VPS50-209ENST00000467326 C12orf50Q8NA57 414 aaPredicted RBP6.67□□□□□ -1.34
VPS50-209ENST00000467326 HIF3AQ9Y2N7 669 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms