RNA–Protein interactions for RNA: ENST00000467182.1

COL4A1-202, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 3

Gene COL4A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-202ENST00000467182 AOC3Q16853 763 aa15.6■□□□□ 0.09
COL4A1-202ENST00000467182 RASEFQ8IZ41 740 aa15.6■□□□□ 0.09
COL4A1-202ENST00000467182 STRBPQ96SI9 672 aaKnown RBP15.6■□□□□ 0.09
COL4A1-202ENST00000467182 PPP1R1BQ9UD71 204 aaPredicted RBP15.6■□□□□ 0.09
COL4A1-202ENST00000467182 SNX14Q9Y5W7 946 aa15.6■□□□□ 0.09
COL4A1-202ENST00000467182 SLC27A2O14975 620 aa15.59■□□□□ 0.09
COL4A1-202ENST00000467182 MCCP23508 829 aa15.59■□□□□ 0.09
COL4A1-202ENST00000467182 SOGA3Q5TF21 947 aa15.59■□□□□ 0.09
COL4A1-202ENST00000467182 CREB3L3Q68CJ9 461 aa15.59■□□□□ 0.09
COL4A1-202ENST00000467182 SPTY2D1Q68D10 685 aaPredicted RBP15.59■□□□□ 0.09
COL4A1-202ENST00000467182 TMED8Q6PL24 325 aaPredicted RBP15.59■□□□□ 0.09
COL4A1-202ENST00000467182 PODNQ7Z5L7 613 aa15.59■□□□□ 0.09
COL4A1-202ENST00000467182 KLHL34Q8N239 644 aa15.59■□□□□ 0.09
COL4A1-202ENST00000467182 ZGPATQ8N5A5 531 aaKnown RBP15.59■□□□□ 0.09
COL4A1-202ENST00000467182 CERS5Q8N5B7 392 aa15.59■□□□□ 0.09
COL4A1-202ENST00000467182 DBNDD1Q9H9R9 158 aa15.59■□□□□ 0.09
COL4A1-202ENST00000467182 LAMA4Q16363 1823 aa15.59■□□□□ 0.09
COL4A1-202ENST00000467182 ECE2O60344 883 aa15.58■□□□□ 0.08
COL4A1-202ENST00000467182 MBD4O95243 580 aa15.58■□□□□ 0.08
COL4A1-202ENST00000467182 GTF2IP78347 998 aa15.58■□□□□ 0.08
COL4A1-202ENST00000467182 NAA16Q6N069 864 aaPredicted RBP15.58■□□□□ 0.08
COL4A1-202ENST00000467182 LCORLQ8N3X6 602 aa15.58■□□□□ 0.08
COL4A1-202ENST00000467182 RIOK1Q9BRS2 568 aaKnown RBP15.58■□□□□ 0.08
COL4A1-202ENST00000467182 ARMT1Q9H993 441 aa15.58■□□□□ 0.08
COL4A1-202ENST00000467182 KCNQ5Q9NR82 932 aa15.58■□□□□ 0.08
COL4A1-202ENST00000467182 TAF6LQ9Y6J9 622 aa15.58■□□□□ 0.08
COL4A1-202ENST00000467182 U3KPZ7 1027 aaPredicted RBP15.58■□□□□ 0.08
COL4A1-202ENST00000467182 MYH2Q9UKX2 1941 aa15.58■□□□□ 0.08
COL4A1-202ENST00000467182 LDHBP07195 334 aaKnown RBP15.57■□□□□ 0.08
COL4A1-202ENST00000467182 RABEP1Q15276 862 aa15.57■□□□□ 0.08
COL4A1-202ENST00000467182 TSGA10IPQ3SY00 556 aa15.57■□□□□ 0.08
COL4A1-202ENST00000467182 MFSD14BQ5SR56 506 aa15.57■□□□□ 0.08
COL4A1-202ENST00000467182 MIGA1Q8NAN2 632 aa15.57■□□□□ 0.08
COL4A1-202ENST00000467182 TBC1D22AQ8WUA7 517 aa15.57■□□□□ 0.08
COL4A1-202ENST00000467182 IPO9Q96P70 1041 aaKnown RBP15.57■□□□□ 0.08
COL4A1-202ENST00000467182 VPS33BQ9H267 617 aa15.57■□□□□ 0.08
COL4A1-202ENST00000467182 YDJCA8MPS7 323 aa15.56■□□□□ 0.08
COL4A1-202ENST00000467182 NFKBIEO00221 500 aa15.56■□□□□ 0.08
COL4A1-202ENST00000467182 PPIP5K2O43314 1243 aa15.56■□□□□ 0.08
COL4A1-202ENST00000467182 DYNLL1P63167 89 aaKnown RBP15.56■□□□□ 0.08
COL4A1-202ENST00000467182 AIDAQ96BJ3 306 aa15.56■□□□□ 0.08
COL4A1-202ENST00000467182 MXD3Q9BW11 206 aa15.56■□□□□ 0.08
COL4A1-202ENST00000467182 EPB41L4AQ9HCS5 686 aaPredicted RBP15.56■□□□□ 0.08
COL4A1-202ENST00000467182 ZNF277Q9NRM2 450 aaPredicted RBP15.56■□□□□ 0.08
COL4A1-202ENST00000467182 RPAP1Q9BWH6 1393 aaPredicted RBP15.56■□□□□ 0.08
COL4A1-202ENST00000467182 ADAMTSL1Q8N6G6 1762 aa15.56■□□□□ 0.08
COL4A1-202ENST00000467182 CDK5RAP2Q96SN8 1893 aa15.55■□□□□ 0.08
COL4A1-202ENST00000467182 ZMYM6O95789 1325 aa15.55■□□□□ 0.08
COL4A1-202ENST00000467182 MAGEB6P1A0A0J9YX57 407 aa15.55■□□□□ 0.08
COL4A1-202ENST00000467182 GSG1L2A8MUP6 293 aa15.55■□□□□ 0.08
COL4A1-202ENST00000467182 PRKAB2O43741 272 aa15.55■□□□□ 0.08
COL4A1-202ENST00000467182 CD2BP2O95400 341 aaKnown RBP15.55■□□□□ 0.08
COL4A1-202ENST00000467182 CYP21A2P08686 494 aa15.55■□□□□ 0.08
COL4A1-202ENST00000467182 FKBP1AP62942 108 aaKnown RBP15.55■□□□□ 0.08
COL4A1-202ENST00000467182 ADCK5Q3MIX3 580 aa15.55■□□□□ 0.08
COL4A1-202ENST00000467182 DACT2Q5SW24 774 aa15.55■□□□□ 0.08
COL4A1-202ENST00000467182 TTLL5Q6EMB2 1281 aa15.55■□□□□ 0.08
COL4A1-202ENST00000467182 DZIP1Q86YF9 867 aaKnown RBP15.55■□□□□ 0.08
COL4A1-202ENST00000467182 SNX21Q969T3 373 aa15.55■□□□□ 0.08
COL4A1-202ENST00000467182 DDRGK1Q96HY6 314 aa15.55■□□□□ 0.08
COL4A1-202ENST00000467182 FHDC1Q9C0D6 1143 aaPredicted RBP15.55■□□□□ 0.08
COL4A1-202ENST00000467182 SUGT1Q9Y2Z0 365 aa15.55■□□□□ 0.08
COL4A1-202ENST00000467182 LTBP3Q9NS15 1303 aa15.54■□□□□ 0.08
COL4A1-202ENST00000467182 PATL2C9JE40 543 aaKnown RBP15.54■□□□□ 0.08
COL4A1-202ENST00000467182 FGAP02671 866 aa15.54■□□□□ 0.08
COL4A1-202ENST00000467182 COL9A3Q14050 684 aaPredicted RBP15.54■□□□□ 0.08
COL4A1-202ENST00000467182 DIXDC1Q155Q3 683 aa15.54■□□□□ 0.08
COL4A1-202ENST00000467182 ALX1Q15699 326 aa15.54■□□□□ 0.08
COL4A1-202ENST00000467182 STRIP1Q5VSL9 837 aa15.54■□□□□ 0.08
COL4A1-202ENST00000467182 FAM163AQ96GL9 167 aaPredicted RBP15.54■□□□□ 0.08
COL4A1-202ENST00000467182 TBC1D2Q9BYX2 928 aa15.54■□□□□ 0.08
COL4A1-202ENST00000467182 BCS1LQ9Y276 419 aa15.54■□□□□ 0.08
COL4A1-202ENST00000467182 TIAM2Q8IVF5 1701 aa15.54■□□□□ 0.08
COL4A1-202ENST00000467182 MROH7-TTC4A0A0A0MT08 1334 aa15.53■□□□□ 0.08
COL4A1-202ENST00000467182 GAKO14976 1311 aa15.53■□□□□ 0.08
COL4A1-202ENST00000467182 G3V3G9 751 aa15.53■□□□□ 0.08
COL4A1-202ENST00000467182 GNAT2P19087 354 aa15.53■□□□□ 0.08
COL4A1-202ENST00000467182 IARSP41252 1262 aaKnown RBP15.53■□□□□ 0.08
COL4A1-202ENST00000467182 PRELPP51888 382 aa15.53■□□□□ 0.08
COL4A1-202ENST00000467182 GSTO1P78417 241 aa15.53■□□□□ 0.08
COL4A1-202ENST00000467182 DCAF8Q5TAQ9 597 aa15.53■□□□□ 0.08
COL4A1-202ENST00000467182 STOX1Q6ZVD7 989 aa15.53■□□□□ 0.08
COL4A1-202ENST00000467182 IFNL3Q8IZI9 196 aa15.53■□□□□ 0.08
COL4A1-202ENST00000467182 TM6SF1Q9BZW5 370 aa15.53■□□□□ 0.08
COL4A1-202ENST00000467182 FOCADQ5VW36 1801 aa15.52■□□□□ 0.08
COL4A1-202ENST00000467182 DDX60LQ5H9U9 1706 aaKnown RBP15.52■□□□□ 0.08
COL4A1-202ENST00000467182 USP17L3A6NCW0 530 aa15.52■□□□□ 0.08
COL4A1-202ENST00000467182 USP17L4A6NCW7 530 aa15.52■□□□□ 0.08
COL4A1-202ENST00000467182 PPP4CP60510 307 aa15.52■□□□□ 0.08
COL4A1-202ENST00000467182 USP17L1Q7RTZ2 530 aa15.52■□□□□ 0.08
COL4A1-202ENST00000467182 FBXW7Q969H0 707 aa15.52■□□□□ 0.08
COL4A1-202ENST00000467182 NBPF3Q9H094 633 aa15.52■□□□□ 0.08
COL4A1-202ENST00000467182 TAOK3Q9H2K8 898 aa15.52■□□□□ 0.08
COL4A1-202ENST00000467182 ZSWIM6Q9HCJ5 1215 aa15.52■□□□□ 0.08
COL4A1-202ENST00000467182 AATFQ9NY61 560 aaKnown RBP eCLIP15.52■□□□□ 0.08
COL4A1-202ENST00000467182 SLC4A4Q9Y6R1 1079 aa15.52■□□□□ 0.08
COL4A1-202ENST00000467182 LAMB1P07942 1786 aa15.52■□□□□ 0.07
COL4A1-202ENST00000467182 GPR75-ASB3A0A0A6YYF3 556 aa15.51■□□□□ 0.07
COL4A1-202ENST00000467182 LDHCP07864 332 aa15.51■□□□□ 0.07
COL4A1-202ENST00000467182 ZKSCAN1P17029 563 aaPredicted RBP15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms