RNA–Protein interactions for RNA: ENST00000467171.2

APOBEC1-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 1, humanhuman

TSL 1 (best)

Gene APOBEC1, Length 861 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1-202ENST00000467171 GNL3LQ9NVN8 582 aaKnown RBP11.39□□□□□ -0.59
APOBEC1-202ENST00000467171 CTNNA3Q9UI47 895 aa11.39□□□□□ -0.59
APOBEC1-202ENST00000467171 LIMCH1Q9UPQ0 1083 aa11.39□□□□□ -0.59
APOBEC1-202ENST00000467171 MYH3P11055 1940 aa11.39□□□□□ -0.59
APOBEC1-202ENST00000467171 PDS5AQ29RF7 1337 aaKnown RBP11.38□□□□□ -0.59
APOBEC1-202ENST00000467171 TAF1LQ8IZX4 1826 aa11.38□□□□□ -0.59
APOBEC1-202ENST00000467171 KLRG2A4D1S0 409 aaPredicted RBP11.38□□□□□ -0.59
APOBEC1-202ENST00000467171 APBA3O96018 575 aa11.38□□□□□ -0.59
APOBEC1-202ENST00000467171 SERPINB2P05120 415 aa11.38□□□□□ -0.59
APOBEC1-202ENST00000467171 HSPD1P10809 573 aaKnown RBP11.38□□□□□ -0.59
APOBEC1-202ENST00000467171 GRAPQ13588 217 aa11.38□□□□□ -0.59
APOBEC1-202ENST00000467171 NBR1Q14596 966 aa11.38□□□□□ -0.59
APOBEC1-202ENST00000467171 ANKRD1Q15327 319 aa11.38□□□□□ -0.59
APOBEC1-202ENST00000467171 ADCK5Q3MIX3 580 aa11.38□□□□□ -0.59
APOBEC1-202ENST00000467171 PI16Q6UXB8 463 aa11.38□□□□□ -0.59
APOBEC1-202ENST00000467171 CCDC129Q6ZRS4 1044 aa11.38□□□□□ -0.59
APOBEC1-202ENST00000467171 CLEC17AQ6ZS10 378 aa11.38□□□□□ -0.59
APOBEC1-202ENST00000467171 GRAPLQ8TC17 118 aaPredicted RBP11.38□□□□□ -0.59
APOBEC1-202ENST00000467171 ZSCAN31Q96LW9 406 aaPredicted RBP11.38□□□□□ -0.59
APOBEC1-202ENST00000467171 PIH1D3Q9NQM4 214 aaKnown RBP11.38□□□□□ -0.59
APOBEC1-202ENST00000467171 SH2B1Q9NRF2 756 aaPredicted RBP11.38□□□□□ -0.59
APOBEC1-202ENST00000467171 PDRG1Q9NUG6 133 aa11.38□□□□□ -0.59
APOBEC1-202ENST00000467171 RGS17Q9UGC6 210 aaPredicted RBP11.38□□□□□ -0.59
APOBEC1-202ENST00000467171 M0R2C6 588 aa11.37□□□□□ -0.59
APOBEC1-202ENST00000467171 CYP21A2P08686 494 aa11.37□□□□□ -0.59
APOBEC1-202ENST00000467171 HMGB1P09429 215 aaKnown RBP11.37□□□□□ -0.59
APOBEC1-202ENST00000467171 RPS6KB1P23443 525 aa11.37□□□□□ -0.59
APOBEC1-202ENST00000467171 BCAMP50895 628 aa11.37□□□□□ -0.59
APOBEC1-202ENST00000467171 AK2P54819 239 aa11.37□□□□□ -0.59
APOBEC1-202ENST00000467171 ST5P78524 1137 aa11.37□□□□□ -0.59
APOBEC1-202ENST00000467171 MAP3K12Q12852 859 aa11.37□□□□□ -0.59
APOBEC1-202ENST00000467171 CAVIN4Q5BKX8 364 aa11.37□□□□□ -0.59
APOBEC1-202ENST00000467171 TMED8Q6PL24 325 aaPredicted RBP11.37□□□□□ -0.59
APOBEC1-202ENST00000467171 BLOC1S2Q6QNY1 142 aa11.37□□□□□ -0.59
APOBEC1-202ENST00000467171 FBXO33Q7Z6M2 555 aa11.37□□□□□ -0.59
APOBEC1-202ENST00000467171 NLGN1Q8N2Q7 840 aa11.37□□□□□ -0.59
APOBEC1-202ENST00000467171 TCRBV5S4A2TA0A5A2 114 aa11.36□□□□□ -0.59
APOBEC1-202ENST00000467171 SNAP23O00161 211 aa11.36□□□□□ -0.59
APOBEC1-202ENST00000467171 POLRMTO00411 1230 aaKnown RBP11.36□□□□□ -0.59
APOBEC1-202ENST00000467171 NPHP1O15259 732 aa11.36□□□□□ -0.59
APOBEC1-202ENST00000467171 GPAA1O43292 621 aa11.36□□□□□ -0.59
APOBEC1-202ENST00000467171 FRAT2O75474 233 aaPredicted RBP11.36□□□□□ -0.59
APOBEC1-202ENST00000467171 PDE6AP16499 860 aa11.36□□□□□ -0.59
APOBEC1-202ENST00000467171 HOXA10P31260 410 aaPredicted RBP11.36□□□□□ -0.59
APOBEC1-202ENST00000467171 PTGER2P43116 358 aa11.36□□□□□ -0.59
APOBEC1-202ENST00000467171 WASHC4Q2M389 1173 aa11.36□□□□□ -0.59
APOBEC1-202ENST00000467171 SLC9C2Q5TAH2 1124 aa11.36□□□□□ -0.59
APOBEC1-202ENST00000467171 C15orf52Q6ZUT6 534 aaKnown RBP11.36□□□□□ -0.59
APOBEC1-202ENST00000467171 FBXO41Q8TF61 875 aa11.36□□□□□ -0.59
APOBEC1-202ENST00000467171 RNF166Q96A37 237 aaPredicted RBP11.36□□□□□ -0.59
APOBEC1-202ENST00000467171 FAM84BQ96KN1 310 aaPredicted RBP11.36□□□□□ -0.59
APOBEC1-202ENST00000467171 NEK1Q96PY6 1258 aa11.36□□□□□ -0.59
APOBEC1-202ENST00000467171 LEMD3Q9Y2U8 911 aa11.36□□□□□ -0.59
APOBEC1-202ENST00000467171 AK9Q5TCS8 1911 aa11.36□□□□□ -0.59
APOBEC1-202ENST00000467171 FOXP2O15409 715 aa11.35□□□□□ -0.59
APOBEC1-202ENST00000467171 IDH1O75874 414 aaKnown RBP11.35□□□□□ -0.59
APOBEC1-202ENST00000467171 MCM4P33991 863 aa11.35□□□□□ -0.59
APOBEC1-202ENST00000467171 DDR1Q08345 913 aa11.35□□□□□ -0.59
APOBEC1-202ENST00000467171 ALX1Q15699 326 aa11.35□□□□□ -0.59
APOBEC1-202ENST00000467171 ZNF827Q17R98 1081 aa11.35□□□□□ -0.59
APOBEC1-202ENST00000467171 SLFNL1Q499Z3 407 aa11.35□□□□□ -0.59
APOBEC1-202ENST00000467171 TMC4Q7Z404 712 aa11.35□□□□□ -0.59
APOBEC1-202ENST00000467171 FBXL16Q8N461 479 aa11.35□□□□□ -0.59
APOBEC1-202ENST00000467171 ZGPATQ8N5A5 531 aaKnown RBP11.35□□□□□ -0.59
APOBEC1-202ENST00000467171 TNPO1Q92973 898 aaKnown RBP11.35□□□□□ -0.59
APOBEC1-202ENST00000467171 PUS7LQ9H0K6 701 aaKnown RBP11.35□□□□□ -0.59
APOBEC1-202ENST00000467171 TFCP2L1Q9NZI6 479 aa11.35□□□□□ -0.59
APOBEC1-202ENST00000467171 DENND2AQ9ULE3 1009 aa11.35□□□□□ -0.59
APOBEC1-202ENST00000467171 BRWD3Q6RI45 1802 aa11.35□□□□□ -0.59
APOBEC1-202ENST00000467171 ZMYM6O95789 1325 aa11.35□□□□□ -0.59
APOBEC1-202ENST00000467171 ZNF532Q9HCE3 1301 aa11.35□□□□□ -0.59
APOBEC1-202ENST00000467171 IRS2Q9Y4H2 1338 aa11.35□□□□□ -0.59
APOBEC1-202ENST00000467171 BBOX1O75936 387 aa11.34□□□□□ -0.59
APOBEC1-202ENST00000467171 PBX2P40425 430 aa11.34□□□□□ -0.59
APOBEC1-202ENST00000467171 POTEAQ6S8J7 498 aa11.34□□□□□ -0.59
APOBEC1-202ENST00000467171 COL23A1Q86Y22 540 aaPredicted RBP11.34□□□□□ -0.59
APOBEC1-202ENST00000467171 CCDC24Q8N4L8 307 aa11.34□□□□□ -0.59
APOBEC1-202ENST00000467171 RBM17Q96I25 401 aaKnown RBP11.34□□□□□ -0.59
APOBEC1-202ENST00000467171 GBP4Q96PP9 640 aa11.34□□□□□ -0.59
APOBEC1-202ENST00000467171 CRAMP1Q96RY5 1269 aa11.34□□□□□ -0.59
APOBEC1-202ENST00000467171 RYDENQ9NUL5 291 aaKnown RBP11.34□□□□□ -0.59
APOBEC1-202ENST00000467171 WWC3Q9ULE0 1092 aa11.34□□□□□ -0.59
APOBEC1-202ENST00000467171 LHX6Q9UPM6 363 aa11.34□□□□□ -0.59
APOBEC1-202ENST00000467171 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.34□□□□□ -0.59
APOBEC1-202ENST00000467171 TAF6LQ9Y6J9 622 aa11.34□□□□□ -0.59
APOBEC1-202ENST00000467171 C4AP0C0L4 1744 aa11.34□□□□□ -0.59
APOBEC1-202ENST00000467171 ARAP2Q8WZ64 1704 aa11.34□□□□□ -0.59
APOBEC1-202ENST00000467171 PNPLA7Q6ZV29 1317 aa11.34□□□□□ -0.59
APOBEC1-202ENST00000467171 DDX11L8A8MPP1 907 aa11.33□□□□□ -0.6
APOBEC1-202ENST00000467171 FGAP02671 866 aa11.33□□□□□ -0.6
APOBEC1-202ENST00000467171 PDIA4P13667 645 aaKnown RBP11.33□□□□□ -0.6
APOBEC1-202ENST00000467171 CPA1P15085 419 aa11.33□□□□□ -0.6
APOBEC1-202ENST00000467171 GNAT2P19087 354 aa11.33□□□□□ -0.6
APOBEC1-202ENST00000467171 PTMSP20962 102 aa11.33□□□□□ -0.6
APOBEC1-202ENST00000467171 HIBADHP31937 336 aaKnown RBP11.33□□□□□ -0.6
APOBEC1-202ENST00000467171 GYG1P46976 350 aa11.33□□□□□ -0.6
APOBEC1-202ENST00000467171 FOXK1P85037 733 aa11.33□□□□□ -0.6
APOBEC1-202ENST00000467171 IMMTQ16891 758 aaKnown RBP11.33□□□□□ -0.6
APOBEC1-202ENST00000467171 DHX32Q7L7V1 743 aaKnown RBP11.33□□□□□ -0.6
APOBEC1-202ENST00000467171 VPS37DQ86XT2 251 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms