RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 RPS26P62854 115 aaKnown RBP6.24□□□□□ -1.41
VPS13A-209ENST00000467124 CAMK2GQ13555 558 aaPredicted RBP6.24□□□□□ -1.41
VPS13A-209ENST00000467124 SEPT6Q14141 434 aa6.24□□□□□ -1.41
VPS13A-209ENST00000467124 PCNX4Q63HM2 1172 aa6.24□□□□□ -1.41
VPS13A-209ENST00000467124 SCARA3Q6AZY7 606 aa6.24□□□□□ -1.41
VPS13A-209ENST00000467124 GDF6Q6KF10 455 aaPredicted RBP6.24□□□□□ -1.41
VPS13A-209ENST00000467124 BNC2Q6ZN30 1099 aaPredicted RBP6.24□□□□□ -1.41
VPS13A-209ENST00000467124 CCDC81Q6ZN84 652 aa6.24□□□□□ -1.41
VPS13A-209ENST00000467124 STK35Q8TDR2 534 aa6.24□□□□□ -1.41
VPS13A-209ENST00000467124 RHOVQ96L33 236 aa6.24□□□□□ -1.41
VPS13A-209ENST00000467124 PIF1Q9H611 641 aa6.24□□□□□ -1.41
VPS13A-209ENST00000467124 SOX17Q9H6I2 414 aaPredicted RBP6.24□□□□□ -1.41
VPS13A-209ENST00000467124 H3BRJ5 948 aa6.23□□□□□ -1.41
VPS13A-209ENST00000467124 OIP5O43482 229 aa6.23□□□□□ -1.41
VPS13A-209ENST00000467124 LILRB5O75023 590 aa6.23□□□□□ -1.41
VPS13A-209ENST00000467124 GARTP22102 1010 aa6.23□□□□□ -1.41
VPS13A-209ENST00000467124 CDC27P30260 824 aa6.23□□□□□ -1.41
VPS13A-209ENST00000467124 HNRNPUQ00839 825 aaKnown RBP eCLIP6.23□□□□□ -1.41
VPS13A-209ENST00000467124 KRT76Q01546 638 aa6.23□□□□□ -1.41
VPS13A-209ENST00000467124 PCDH1Q08174 1060 aa6.23□□□□□ -1.41
VPS13A-209ENST00000467124 ZNF423Q2M1K9 1284 aa6.23□□□□□ -1.41
VPS13A-209ENST00000467124 HGSNATQ68CP4 663 aa6.23□□□□□ -1.41
VPS13A-209ENST00000467124 C20orf204Q6ZNR8 217 aa6.23□□□□□ -1.41
VPS13A-209ENST00000467124 MAP4K3Q8IVH8 894 aa6.23□□□□□ -1.41
VPS13A-209ENST00000467124 GRIN3AQ8TCU5 1115 aa6.23□□□□□ -1.41
VPS13A-209ENST00000467124 NUDT8Q8WV74 236 aa6.23□□□□□ -1.41
VPS13A-209ENST00000467124 ACDQ96AP0 544 aa6.23□□□□□ -1.41
VPS13A-209ENST00000467124 SPATA32Q96LK8 384 aa6.23□□□□□ -1.41
VPS13A-209ENST00000467124 ZSWIM4Q9H7M6 989 aa6.23□□□□□ -1.41
VPS13A-209ENST00000467124 CBX8Q9HC52 389 aa6.23□□□□□ -1.41
VPS13A-209ENST00000467124 TMEM39AQ9NV64 488 aa6.23□□□□□ -1.41
VPS13A-209ENST00000467124 BCRP11274 1271 aa6.22□□□□□ -1.41
VPS13A-209ENST00000467124 LMNB1P20700 586 aa6.22□□□□□ -1.41
VPS13A-209ENST00000467124 ETFBP38117 255 aa6.22□□□□□ -1.41
VPS13A-209ENST00000467124 BMS1Q14692 1282 aaKnown RBP6.22□□□□□ -1.41
VPS13A-209ENST00000467124 SEZ6Q53EL9 994 aa6.22□□□□□ -1.41
VPS13A-209ENST00000467124 DIEXFQ68CQ4 756 aaKnown RBP6.22□□□□□ -1.41
VPS13A-209ENST00000467124 TXNDC11Q6PKC3 985 aa6.22□□□□□ -1.41
VPS13A-209ENST00000467124 MPRIPQ6WCQ1 1025 aa6.22□□□□□ -1.41
VPS13A-209ENST00000467124 CHSY3Q70JA7 882 aa6.22□□□□□ -1.41
VPS13A-209ENST00000467124 VN1R5Q7Z5H4 357 aa6.22□□□□□ -1.41
VPS13A-209ENST00000467124 EDARADDQ8WWZ3 215 aa6.22□□□□□ -1.41
VPS13A-209ENST00000467124 ANAPC16Q96DE5 110 aa6.22□□□□□ -1.41
VPS13A-209ENST00000467124 ZC3H12CQ9C0D7 883 aaKnown RBP6.22□□□□□ -1.41
VPS13A-209ENST00000467124 JPH1Q9HDC5 661 aaPredicted RBP6.22□□□□□ -1.41
VPS13A-209ENST00000467124 STARD13Q9Y3M8 1113 aa6.22□□□□□ -1.41
VPS13A-209ENST00000467124 SUPT16HQ9Y5B9 1047 aaKnown RBP6.22□□□□□ -1.41
VPS13A-209ENST00000467124 F13A1P00488 732 aa6.21□□□□□ -1.42
VPS13A-209ENST00000467124 PIP4K2BP78356 416 aa6.21□□□□□ -1.42
VPS13A-209ENST00000467124 APOBRQ0VD83 1088 aa6.21□□□□□ -1.42
VPS13A-209ENST00000467124 AP3B2Q13367 1082 aa6.21□□□□□ -1.42
VPS13A-209ENST00000467124 IKBKEQ14164 716 aa6.21□□□□□ -1.42
VPS13A-209ENST00000467124 FAM117BQ6P1L5 589 aa6.21□□□□□ -1.42
VPS13A-209ENST00000467124 CPLX3Q8WVH0 158 aa6.21□□□□□ -1.42
VPS13A-209ENST00000467124 NKD1Q969G9 470 aa6.21□□□□□ -1.42
VPS13A-209ENST00000467124 ZNF408Q9H9D4 720 aa6.21□□□□□ -1.42
VPS13A-209ENST00000467124 KCNQ5Q9NR82 932 aa6.21□□□□□ -1.42
VPS13A-209ENST00000467124 ALBP02768 609 aa6.2□□□□□ -1.42
VPS13A-209ENST00000467124 ESRRAP11474 423 aaPredicted RBP6.2□□□□□ -1.42
VPS13A-209ENST00000467124 MCM4P33991 863 aa6.2□□□□□ -1.42
VPS13A-209ENST00000467124 AFF1P51825 1210 aaKnown RBP6.2□□□□□ -1.42
VPS13A-209ENST00000467124 LMNB2Q03252 620 aa6.2□□□□□ -1.42
VPS13A-209ENST00000467124 GRIK5Q16478 980 aa6.2□□□□□ -1.42
VPS13A-209ENST00000467124 FBXW10Q5XX13 1052 aa6.2□□□□□ -1.42
VPS13A-209ENST00000467124 AGMOQ6ZNB7 445 aa6.2□□□□□ -1.42
VPS13A-209ENST00000467124 CCDC84Q86UT8 332 aaPredicted RBP6.2□□□□□ -1.42
VPS13A-209ENST00000467124 SULF2Q8IWU5 870 aa6.2□□□□□ -1.42
VPS13A-209ENST00000467124 RASGRP4Q8TDF6 673 aa6.2□□□□□ -1.42
VPS13A-209ENST00000467124 EMILIN2Q9BXX0 1053 aa6.2□□□□□ -1.42
VPS13A-209ENST00000467124 OSGEPQ9NPF4 335 aa6.2□□□□□ -1.42
VPS13A-209ENST00000467124 PPT2Q9UMR5 302 aa6.2□□□□□ -1.42
VPS13A-209ENST00000467124 PPME1Q9Y570 386 aa6.2□□□□□ -1.42
VPS13A-209ENST00000467124 M0R082 166 aa6.19□□□□□ -1.42
VPS13A-209ENST00000467124 PIK3R2O00459 728 aa6.19□□□□□ -1.42
VPS13A-209ENST00000467124 GREM1O60565 184 aa6.19□□□□□ -1.42
VPS13A-209ENST00000467124 WFS1O76024 890 aa6.19□□□□□ -1.42
VPS13A-209ENST00000467124 EPHA1P21709 976 aa6.19□□□□□ -1.42
VPS13A-209ENST00000467124 BMP6P22004 513 aa6.19□□□□□ -1.42
VPS13A-209ENST00000467124 NME2P22392 152 aa6.19□□□□□ -1.42
VPS13A-209ENST00000467124 ARL4DP49703 201 aa6.19□□□□□ -1.42
VPS13A-209ENST00000467124 RBL2Q08999 1139 aa6.19□□□□□ -1.42
VPS13A-209ENST00000467124 LRRC14Q15048 493 aa6.19□□□□□ -1.42
VPS13A-209ENST00000467124 HP1BP3Q5SSJ5 553 aaPredicted RBP6.19□□□□□ -1.42
VPS13A-209ENST00000467124 WFDC8Q8IUA0 241 aa6.19□□□□□ -1.42
VPS13A-209ENST00000467124 DTWD1Q8N5C7 304 aa6.19□□□□□ -1.42
VPS13A-209ENST00000467124 GALNT6Q8NCL4 622 aa6.19□□□□□ -1.42
VPS13A-209ENST00000467124 ZNF417Q8TAU3 575 aa6.19□□□□□ -1.42
VPS13A-209ENST00000467124 HNRNPLLQ8WVV9 542 aaKnown RBP6.19□□□□□ -1.42
VPS13A-209ENST00000467124 SLC7A3Q8WY07 619 aa6.19□□□□□ -1.42
VPS13A-209ENST00000467124 ZNF587Q96SQ5 575 aaPredicted RBP6.19□□□□□ -1.42
VPS13A-209ENST00000467124 NT5C1AQ9BXI3 368 aa6.19□□□□□ -1.42
VPS13A-209ENST00000467124 OSBPL2Q9H1P3 480 aa6.19□□□□□ -1.42
VPS13A-209ENST00000467124 ENAMQ9NRM1 1142 aa6.19□□□□□ -1.42
VPS13A-209ENST00000467124 CYP8B1Q9UNU6 501 aa6.19□□□□□ -1.42
VPS13A-209ENST00000467124 CCDC85CA6NKD9 419 aa6.18□□□□□ -1.42
VPS13A-209ENST00000467124 CDK8P49336 464 aa6.18□□□□□ -1.42
VPS13A-209ENST00000467124 PTPN11Q06124 597 aaPredicted RBP6.18□□□□□ -1.42
VPS13A-209ENST00000467124 MSL1Q68DK7 614 aa6.18□□□□□ -1.42
VPS13A-209ENST00000467124 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.18□□□□□ -1.42
VPS13A-209ENST00000467124 FAM196AQ6ZSG2 479 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms