RNA–Protein interactions for RNA: ENST00000466963.1

CXXC4-202, Transcript of CXXC finger protein 4, humanhuman

TSL 1 (best)

Gene CXXC4, Length 3,130 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-202ENST00000466963 FAM89AQ96GI7 184 aa7.27□□□□□ -1.25
CXXC4-202ENST00000466963 PAK6Q9NQU5 681 aaPredicted RBP7.27□□□□□ -1.25
CXXC4-202ENST00000466963 CHPF2Q9P2E5 772 aa7.27□□□□□ -1.25
CXXC4-202ENST00000466963 RPTORQ8N122 1335 aa7.27□□□□□ -1.25
CXXC4-202ENST00000466963 SHTN1A0MZ66 631 aa7.27□□□□□ -1.25
CXXC4-202ENST00000466963 CCL5P13501 91 aa7.27□□□□□ -1.25
CXXC4-202ENST00000466963 ZGPATQ8N5A5 531 aaKnown RBP7.27□□□□□ -1.25
CXXC4-202ENST00000466963 BRI3BPQ8WY22 251 aa7.27□□□□□ -1.25
CXXC4-202ENST00000466963 ZDHHC15Q96MV8 337 aa7.27□□□□□ -1.25
CXXC4-202ENST00000466963 DUSP27Q5VZP5 1158 aa7.26□□□□□ -1.25
CXXC4-202ENST00000466963 COA7Q96BR5 231 aa7.26□□□□□ -1.25
CXXC4-202ENST00000466963 SEZ6LQ9BYH1 1024 aa7.26□□□□□ -1.25
CXXC4-202ENST00000466963 FOXD4L1Q9NU39 408 aa7.26□□□□□ -1.25
CXXC4-202ENST00000466963 ZNF70Q9UC06 446 aaPredicted RBP7.26□□□□□ -1.25
CXXC4-202ENST00000466963 RIPOR2Q9Y4F9 1068 aa7.26□□□□□ -1.25
CXXC4-202ENST00000466963 TCERG1O14776 1098 aaKnown RBP7.26□□□□□ -1.25
CXXC4-202ENST00000466963 BCRP11274 1271 aa7.26□□□□□ -1.25
CXXC4-202ENST00000466963 XRCC5P13010 732 aaKnown RBP7.26□□□□□ -1.25
CXXC4-202ENST00000466963 MAP3K10Q02779 954 aa7.26□□□□□ -1.25
CXXC4-202ENST00000466963 CHRDL2Q6WN34 429 aa7.26□□□□□ -1.25
CXXC4-202ENST00000466963 CERS3Q8IU89 383 aa7.26□□□□□ -1.25
CXXC4-202ENST00000466963 LINS1Q8NG48 757 aa7.26□□□□□ -1.25
CXXC4-202ENST00000466963 SOCS4Q8WXH5 440 aa7.26□□□□□ -1.25
CXXC4-202ENST00000466963 ALDH1L1O75891 902 aa7.25□□□□□ -1.25
CXXC4-202ENST00000466963 CACNB1Q02641 598 aaPredicted RBP7.25□□□□□ -1.25
CXXC4-202ENST00000466963 DCTN1Q14203 1278 aa7.25□□□□□ -1.25
CXXC4-202ENST00000466963 RASA3Q14644 834 aa7.25□□□□□ -1.25
CXXC4-202ENST00000466963 TDHQ8IZJ6 230 aa7.25□□□□□ -1.25
CXXC4-202ENST00000466963 PROCA1Q8NCQ7 364 aaPredicted RBP7.25□□□□□ -1.25
CXXC4-202ENST00000466963 SHISA4Q96DD7 197 aa7.25□□□□□ -1.25
CXXC4-202ENST00000466963 RBM27Q9P2N5 1060 aaKnown RBP7.25□□□□□ -1.25
CXXC4-202ENST00000466963 MYBBP1AQ9BQG0 1328 aaKnown RBP7.25□□□□□ -1.25
CXXC4-202ENST00000466963 ENTPD3O75355 529 aa7.25□□□□□ -1.25
CXXC4-202ENST00000466963 CCDC174Q6PII3 467 aa7.25□□□□□ -1.25
CXXC4-202ENST00000466963 FAM151AQ8WW52 585 aa7.25□□□□□ -1.25
CXXC4-202ENST00000466963 TEKT1Q969V4 418 aa7.25□□□□□ -1.25
CXXC4-202ENST00000466963 SYNGAP1Q96PV0 1343 aa7.25□□□□□ -1.25
CXXC4-202ENST00000466963 SALL1Q9NSC2 1324 aa7.25□□□□□ -1.25
CXXC4-202ENST00000466963 TBC1D12O60347 775 aa7.25□□□□□ -1.25
CXXC4-202ENST00000466963 HMGCRP04035 888 aa7.25□□□□□ -1.25
CXXC4-202ENST00000466963 PROSER3Q2NL68 480 aa7.25□□□□□ -1.25
CXXC4-202ENST00000466963 WDR66Q8TBY9 1149 aa7.25□□□□□ -1.25
CXXC4-202ENST00000466963 U2AF1L4Q8WU68 220 aaKnown RBP7.25□□□□□ -1.25
CXXC4-202ENST00000466963 NBPF3Q9H094 633 aa7.25□□□□□ -1.25
CXXC4-202ENST00000466963 PRDM6Q9NQX0 595 aa7.25□□□□□ -1.25
CXXC4-202ENST00000466963 SMAD3P84022 425 aaKnown RBP7.24□□□□□ -1.25
CXXC4-202ENST00000466963 AIMP1Q12904 312 aaKnown RBP7.24□□□□□ -1.25
CXXC4-202ENST00000466963 GCKRQ14397 625 aa7.24□□□□□ -1.25
CXXC4-202ENST00000466963 FAM110CQ1W6H9 321 aa7.24□□□□□ -1.25
CXXC4-202ENST00000466963 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.24□□□□□ -1.25
CXXC4-202ENST00000466963 TEPSINQ96N21 525 aa7.24□□□□□ -1.25
CXXC4-202ENST00000466963 PTPN18Q99952 460 aa7.24□□□□□ -1.25
CXXC4-202ENST00000466963 KCNH6Q9H252 994 aa7.24□□□□□ -1.25
CXXC4-202ENST00000466963 NRBP1Q9UHY1 535 aa7.24□□□□□ -1.25
CXXC4-202ENST00000466963 LOC285556D6RIA3 1793 aa7.24□□□□□ -1.25
CXXC4-202ENST00000466963 GTF2IP78347 998 aa7.24□□□□□ -1.25
CXXC4-202ENST00000466963 IFIT5Q13325 482 aaKnown RBP7.24□□□□□ -1.25
CXXC4-202ENST00000466963 MYD88Q99836 296 aa7.24□□□□□ -1.25
CXXC4-202ENST00000466963 OGDHLQ9ULD0 1010 aa7.24□□□□□ -1.25
CXXC4-202ENST00000466963 OSBPP22059 807 aa7.23□□□□□ -1.25
CXXC4-202ENST00000466963 PSMC4P43686 418 aa7.23□□□□□ -1.25
CXXC4-202ENST00000466963 VGLL4Q14135 290 aa7.23□□□□□ -1.25
CXXC4-202ENST00000466963 WDR43Q15061 677 aaKnown RBP eCLIP7.23□□□□□ -1.25
CXXC4-202ENST00000466963 WWC1Q8IX03 1113 aa7.23□□□□□ -1.25
CXXC4-202ENST00000466963 SPEF2Q9C093 1822 aa7.23□□□□□ -1.25
CXXC4-202ENST00000466963 NEURL1BA8MQ27 555 aa7.23□□□□□ -1.25
CXXC4-202ENST00000466963 GLRX3O76003 335 aaKnown RBP7.23□□□□□ -1.25
CXXC4-202ENST00000466963 GJA5P36382 358 aa7.23□□□□□ -1.25
CXXC4-202ENST00000466963 C1QBPQ07021 282 aaKnown RBP7.23□□□□□ -1.25
CXXC4-202ENST00000466963 CAVIN4Q5BKX8 364 aa7.23□□□□□ -1.25
CXXC4-202ENST00000466963 MTMR10Q9NXD2 777 aa7.23□□□□□ -1.25
CXXC4-202ENST00000466963 SNCAIPQ9Y6H5 919 aa7.23□□□□□ -1.25
CXXC4-202ENST00000466963 DOCK2Q92608 1830 aa7.23□□□□□ -1.25
CXXC4-202ENST00000466963 ZNF236Q9UL36 1845 aa7.23□□□□□ -1.25
CXXC4-202ENST00000466963 ASTN2O75129 1339 aaPredicted RBP7.23□□□□□ -1.25
CXXC4-202ENST00000466963 A0A0G2JLL6 359 aaPredicted RBP7.23□□□□□ -1.25
CXXC4-202ENST00000466963 BTBD19C9JJ37 291 aa7.23□□□□□ -1.25
CXXC4-202ENST00000466963 FMNL1O95466 1100 aaPredicted RBP7.23□□□□□ -1.25
CXXC4-202ENST00000466963 CHRNDQ07001 517 aa7.23□□□□□ -1.25
CXXC4-202ENST00000466963 C1orf53Q5VUE5 145 aa7.23□□□□□ -1.25
CXXC4-202ENST00000466963 PRRT2Q7Z6L0 340 aaPredicted RBP7.23□□□□□ -1.25
CXXC4-202ENST00000466963 DZIP1LQ8IYY4 767 aaKnown RBP7.23□□□□□ -1.25
CXXC4-202ENST00000466963 ZNF428Q96B54 188 aa7.23□□□□□ -1.25
CXXC4-202ENST00000466963 THUMPD2Q9BTF0 503 aaKnown RBP7.23□□□□□ -1.25
CXXC4-202ENST00000466963 OSBPL5Q9H0X9 879 aaPredicted RBP7.23□□□□□ -1.25
CXXC4-202ENST00000466963 C11orf49Q9H6J7 331 aa7.23□□□□□ -1.25
CXXC4-202ENST00000466963 MORF4L1Q9UBU8 362 aa7.23□□□□□ -1.25
CXXC4-202ENST00000466963 DOCK1Q14185 1865 aa7.22□□□□□ -1.25
CXXC4-202ENST00000466963 ADCY3O60266 1144 aa7.22□□□□□ -1.25
CXXC4-202ENST00000466963 HIBADHP31937 336 aaKnown RBP7.22□□□□□ -1.25
CXXC4-202ENST00000466963 RNF208Q9H0X6 261 aa7.22□□□□□ -1.25
CXXC4-202ENST00000466963 R3HDMLQ9H3Y0 253 aa7.22□□□□□ -1.25
CXXC4-202ENST00000466963 SEC31BQ9NQW1 1179 aa7.22□□□□□ -1.25
CXXC4-202ENST00000466963 KCNQ5Q9NR82 932 aa7.22□□□□□ -1.25
CXXC4-202ENST00000466963 MIS18AQ9NYP9 233 aa7.22□□□□□ -1.25
CXXC4-202ENST00000466963 ITGA6P23229 1130 aa7.22□□□□□ -1.25
CXXC4-202ENST00000466963 CRKP46108 304 aa7.22□□□□□ -1.25
CXXC4-202ENST00000466963 KIAA0825Q8IV33 1275 aa7.22□□□□□ -1.25
CXXC4-202ENST00000466963 ELP3Q9H9T3 547 aa7.22□□□□□ -1.25
CXXC4-202ENST00000466963 AS3MTQ9HBK9 375 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms