RNA–Protein interactions for RNA: ENST00000466854.5

CCDC58-203, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 769 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-203ENST00000466854 CYP4F12Q9HCS2 524 aa6.83□□□□□ -1.32
CCDC58-203ENST00000466854 A0A096LPE4 126 aa6.82□□□□□ -1.32
CCDC58-203ENST00000466854 A0A1W2PPZ6 126 aa6.82□□□□□ -1.32
CCDC58-203ENST00000466854 WDR64B1ANS9 1081 aa6.82□□□□□ -1.32
CCDC58-203ENST00000466854 CTSBP07858 339 aa6.82□□□□□ -1.32
CCDC58-203ENST00000466854 GRIK1P39086 918 aa6.82□□□□□ -1.32
CCDC58-203ENST00000466854 GP2P55259 537 aaKnown RBP6.82□□□□□ -1.32
CCDC58-203ENST00000466854 PCDH1Q08174 1060 aa6.82□□□□□ -1.32
CCDC58-203ENST00000466854 ZNF423Q2M1K9 1284 aa6.82□□□□□ -1.32
CCDC58-203ENST00000466854 SHISA5Q8N114 240 aa6.82□□□□□ -1.32
CCDC58-203ENST00000466854 C2CD4AQ8NCU7 369 aaPredicted RBP6.82□□□□□ -1.32
CCDC58-203ENST00000466854 CLEC4MQ9H2X3 399 aaPredicted RBP6.82□□□□□ -1.32
CCDC58-203ENST00000466854 COL17A1Q9UMD9 1497 aaPredicted RBP6.81□□□□□ -1.32
CCDC58-203ENST00000466854 HOXA10P31260 410 aaPredicted RBP6.81□□□□□ -1.32
CCDC58-203ENST00000466854 EXOSC6Q5RKV6 272 aaKnown RBP6.81□□□□□ -1.32
CCDC58-203ENST00000466854 CDPF1Q6NVV7 123 aa6.81□□□□□ -1.32
CCDC58-203ENST00000466854 LIN7BQ9HAP6 207 aa6.81□□□□□ -1.32
CCDC58-203ENST00000466854 IGHA2P01877 340 aa6.8□□□□□ -1.32
CCDC58-203ENST00000466854 F13BP05160 661 aa6.8□□□□□ -1.32
CCDC58-203ENST00000466854 ORC1Q13415 861 aa6.8□□□□□ -1.32
CCDC58-203ENST00000466854 GLYCTKQ8IVS8 523 aa6.8□□□□□ -1.32
CCDC58-203ENST00000466854 FBLIM1Q8WUP2 373 aa6.8□□□□□ -1.32
CCDC58-203ENST00000466854 FAM129BQ96TA1 746 aa6.8□□□□□ -1.32
CCDC58-203ENST00000466854 TRIM56Q9BRZ2 755 aaKnown RBP6.8□□□□□ -1.32
CCDC58-203ENST00000466854 BRPF3Q9ULD4 1205 aa6.8□□□□□ -1.32
CCDC58-203ENST00000466854 ADH5P11766 374 aa6.79□□□□□ -1.32
CCDC58-203ENST00000466854 RXRBP28702 533 aa6.79□□□□□ -1.32
CCDC58-203ENST00000466854 SOX4Q06945 474 aaPredicted RBP6.79□□□□□ -1.32
CCDC58-203ENST00000466854 KIAA0319Q5VV43 1072 aa6.79□□□□□ -1.32
CCDC58-203ENST00000466854 B4GALNT3Q6L9W6 998 aa6.79□□□□□ -1.32
CCDC58-203ENST00000466854 FBXL6Q8N531 539 aa6.79□□□□□ -1.32
CCDC58-203ENST00000466854 PIM2Q9P1W9 311 aa6.79□□□□□ -1.32
CCDC58-203ENST00000466854 FAM95CA0A1B0GW59 222 aa6.78□□□□□ -1.32
CCDC58-203ENST00000466854 ECEL1O95672 775 aa6.78□□□□□ -1.32
CCDC58-203ENST00000466854 MAOBP27338 520 aa6.78□□□□□ -1.32
CCDC58-203ENST00000466854 EZH1Q92800 747 aaPredicted RBP6.78□□□□□ -1.32
CCDC58-203ENST00000466854 ZNF576Q9H609 170 aa6.78□□□□□ -1.32
CCDC58-203ENST00000466854 NPHS2Q9NP85 383 aa6.78□□□□□ -1.32
CCDC58-203ENST00000466854 NDUFB5O43674 189 aa6.77□□□□□ -1.33
CCDC58-203ENST00000466854 B3GALT4O96024 378 aa6.77□□□□□ -1.33
CCDC58-203ENST00000466854 ITPKAP23677 461 aa6.77□□□□□ -1.33
CCDC58-203ENST00000466854 ADMP35318 185 aa6.77□□□□□ -1.33
CCDC58-203ENST00000466854 IRAK1P51617 712 aa6.77□□□□□ -1.33
CCDC58-203ENST00000466854 MSMPQ1L6U9 139 aa6.77□□□□□ -1.33
CCDC58-203ENST00000466854 TXNDC2Q86VQ3 553 aa6.77□□□□□ -1.33
CCDC58-203ENST00000466854 GATA6Q92908 595 aa6.77□□□□□ -1.33
CCDC58-203ENST00000466854 ACTL7BQ9Y614 415 aa6.77□□□□□ -1.33
CCDC58-203ENST00000466854 GPR182O15218 404 aa6.76□□□□□ -1.33
CCDC58-203ENST00000466854 CYP11A1P05108 521 aa6.76□□□□□ -1.33
CCDC58-203ENST00000466854 USP11P51784 963 aa6.76□□□□□ -1.33
CCDC58-203ENST00000466854 POU4F3Q15319 338 aa6.76□□□□□ -1.33
CCDC58-203ENST00000466854 NFKBIBQ15653 356 aa6.76□□□□□ -1.33
CCDC58-203ENST00000466854 PRKAG2Q9UGJ0 569 aa6.76□□□□□ -1.33
CCDC58-203ENST00000466854 EIF4EBP3O60516 100 aaPredicted RBP6.75□□□□□ -1.33
CCDC58-203ENST00000466854 CPNE3O75131 537 aaKnown RBP6.75□□□□□ -1.33
CCDC58-203ENST00000466854 WNT11O96014 354 aa6.75□□□□□ -1.33
CCDC58-203ENST00000466854 FOSL1P15407 271 aa6.75□□□□□ -1.33
CCDC58-203ENST00000466854 TAL1P17542 331 aaPredicted RBP6.75□□□□□ -1.33
CCDC58-203ENST00000466854 FZD5Q13467 585 aa6.75□□□□□ -1.33
CCDC58-203ENST00000466854 CPSF6Q16630 551 aaKnown RBP eCLIP6.75□□□□□ -1.33
CCDC58-203ENST00000466854 PAOXQ6QHF9 649 aa6.75□□□□□ -1.33
CCDC58-203ENST00000466854 NFXL1Q6ZNB6 911 aa6.75□□□□□ -1.33
CCDC58-203ENST00000466854 ZAR1Q86SH2 424 aa6.75□□□□□ -1.33
CCDC58-203ENST00000466854 OSBPL1AQ9BXW6 950 aa6.75□□□□□ -1.33
CCDC58-203ENST00000466854 EHD4Q9H223 541 aa6.75□□□□□ -1.33
CCDC58-203ENST00000466854 ABCB6Q9NP58 842 aa6.75□□□□□ -1.33
CCDC58-203ENST00000466854 ATG3Q9NT62 314 aa6.75□□□□□ -1.33
CCDC58-203ENST00000466854 LEMD3Q9Y2U8 911 aa6.75□□□□□ -1.33
CCDC58-203ENST00000466854 NEFLP07196 543 aa6.74□□□□□ -1.33
CCDC58-203ENST00000466854 PDE3BQ13370 1112 aa6.74□□□□□ -1.33
CCDC58-203ENST00000466854 RETREG2Q8NC44 543 aa6.74□□□□□ -1.33
CCDC58-203ENST00000466854 GIMAP7Q8NHV1 300 aa6.74□□□□□ -1.33
CCDC58-203ENST00000466854 CITED4Q96RK1 184 aa6.74□□□□□ -1.33
CCDC58-203ENST00000466854 FAM105AQ9NUU6 356 aa6.74□□□□□ -1.33
CCDC58-203ENST00000466854 FAM170BA6NMN3 283 aa6.73□□□□□ -1.33
CCDC58-203ENST00000466854 EIF1AYO14602 144 aaKnown RBP6.73□□□□□ -1.33
CCDC58-203ENST00000466854 NFICP08651 508 aa6.73□□□□□ -1.33
CCDC58-203ENST00000466854 TXKP42681 527 aa6.73□□□□□ -1.33
CCDC58-203ENST00000466854 AKAP4Q5JQC9 854 aa6.73□□□□□ -1.33
CCDC58-203ENST00000466854 PRPF40BQ6NWY9 871 aaKnown RBP6.73□□□□□ -1.33
CCDC58-203ENST00000466854 GLIS3Q8NEA6 775 aa6.73□□□□□ -1.33
CCDC58-203ENST00000466854 CCDC74AQ96AQ1 378 aa6.73□□□□□ -1.33
CCDC58-203ENST00000466854 TBC1D32Q96NH3 1257 aa6.73□□□□□ -1.33
CCDC58-203ENST00000466854 SEMA6CQ9H3T2 930 aa6.73□□□□□ -1.33
CCDC58-203ENST00000466854 GSX1Q9H4S2 264 aaPredicted RBP6.73□□□□□ -1.33
CCDC58-203ENST00000466854 ADGRE2Q9UHX3 823 aa6.73□□□□□ -1.33
CCDC58-203ENST00000466854 RAB6AP20340 208 aa6.72□□□□□ -1.33
CCDC58-203ENST00000466854 PTPN12Q05209 780 aaKnown RBP6.72□□□□□ -1.33
CCDC58-203ENST00000466854 DYMQ7RTS9 669 aa6.72□□□□□ -1.33
CCDC58-203ENST00000466854 FMNL2Q96PY5 1086 aa6.72□□□□□ -1.33
CCDC58-203ENST00000466854 CORO1BQ9BR76 489 aa6.72□□□□□ -1.33
CCDC58-203ENST00000466854 METTL22Q9BUU2 404 aaPredicted RBP6.72□□□□□ -1.33
CCDC58-203ENST00000466854 WDR18Q9BV38 432 aa6.72□□□□□ -1.33
CCDC58-203ENST00000466854 YIPF2Q9BWQ6 316 aa6.72□□□□□ -1.33
CCDC58-203ENST00000466854 NIF3L1Q9GZT8 377 aa6.72□□□□□ -1.33
CCDC58-203ENST00000466854 DNAJC25Q9H1X3 360 aa6.72□□□□□ -1.33
CCDC58-203ENST00000466854 ACSS3Q9H6R3 686 aa6.72□□□□□ -1.33
CCDC58-203ENST00000466854 AP4E1Q9UPM8 1137 aa6.72□□□□□ -1.33
CCDC58-203ENST00000466854 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.71□□□□□ -1.34
CCDC58-203ENST00000466854 PAX4O43316 350 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms