RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 KRT79Q5XKE5 535 aa9.85□□□□□ -0.83
HPS4-209ENST00000466781 SUPT20HQ8NEM7 779 aa9.85□□□□□ -0.83
HPS4-209ENST00000466781 SLC52A2Q9HAB3 445 aa9.85□□□□□ -0.83
HPS4-209ENST00000466781 POLR3AO14802 1390 aaPredicted RBP9.85□□□□□ -0.83
HPS4-209ENST00000466781 GRM8O00222 908 aa9.85□□□□□ -0.83
HPS4-209ENST00000466781 AKNAD1Q5T1N1 836 aa9.85□□□□□ -0.83
HPS4-209ENST00000466781 PICK1Q9NRD5 415 aa9.85□□□□□ -0.83
HPS4-209ENST00000466781 IGHDP01880 384 aa9.84□□□□□ -0.83
HPS4-209ENST00000466781 TPD52P55327 224 aaPredicted RBP9.84□□□□□ -0.83
HPS4-209ENST00000466781 KCNG4Q8TDN1 519 aa9.84□□□□□ -0.83
HPS4-209ENST00000466781 RBM27Q9P2N5 1060 aaKnown RBP9.84□□□□□ -0.83
HPS4-209ENST00000466781 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.84□□□□□ -0.83
HPS4-209ENST00000466781 V9GYY5 206 aaPredicted RBP9.84□□□□□ -0.83
HPS4-209ENST00000466781 ATP2A2P16615 1042 aaKnown RBP9.84□□□□□ -0.83
HPS4-209ENST00000466781 UBASH3AP57075 661 aa9.84□□□□□ -0.83
HPS4-209ENST00000466781 CEP135Q66GS9 1140 aa9.84□□□□□ -0.83
HPS4-209ENST00000466781 BEGAINQ9BUH8 593 aa9.84□□□□□ -0.83
HPS4-209ENST00000466781 PA2G4Q9UQ80 394 aaKnown RBP9.84□□□□□ -0.83
HPS4-209ENST00000466781 CLASP1Q7Z460 1538 aa9.84□□□□□ -0.83
HPS4-209ENST00000466781 LPXNO60711 386 aa9.84□□□□□ -0.83
HPS4-209ENST00000466781 SPAG1Q07617 926 aa9.84□□□□□ -0.83
HPS4-209ENST00000466781 GPR162Q16538 588 aa9.84□□□□□ -0.83
HPS4-209ENST00000466781 MEIS3Q99687 375 aa9.84□□□□□ -0.83
HPS4-209ENST00000466781 NAP1L4Q99733 375 aaKnown RBP9.84□□□□□ -0.83
HPS4-209ENST00000466781 NSFL1CQ9UNZ2 370 aaKnown RBP9.84□□□□□ -0.83
HPS4-209ENST00000466781 PLCB3Q01970 1234 aa9.84□□□□□ -0.83
HPS4-209ENST00000466781 SP4Q02446 784 aa9.84□□□□□ -0.83
HPS4-209ENST00000466781 BRDTQ58F21 947 aaPredicted RBP9.84□□□□□ -0.83
HPS4-209ENST00000466781 CALML3P27482 149 aa9.84□□□□□ -0.83
HPS4-209ENST00000466781 GNG11P61952 73 aa9.84□□□□□ -0.83
HPS4-209ENST00000466781 MCMDC2Q4G0Z9 681 aa9.84□□□□□ -0.83
HPS4-209ENST00000466781 SMC6Q96SB8 1091 aa9.84□□□□□ -0.83
HPS4-209ENST00000466781 BICDL2A1A5D9 508 aa9.83□□□□□ -0.84
HPS4-209ENST00000466781 UBE2HP62256 183 aa9.83□□□□□ -0.84
HPS4-209ENST00000466781 CWF19L2Q2TBE0 894 aaKnown RBP9.83□□□□□ -0.84
HPS4-209ENST00000466781 HS2ST1Q7LGA3 356 aa9.83□□□□□ -0.84
HPS4-209ENST00000466781 TACC1O75410 805 aa9.83□□□□□ -0.84
HPS4-209ENST00000466781 CCDC6Q16204 474 aa9.83□□□□□ -0.84
HPS4-209ENST00000466781 TTC22Q5TAA0 569 aa9.83□□□□□ -0.84
HPS4-209ENST00000466781 MRPL50Q8N5N7 158 aaKnown RBP9.83□□□□□ -0.84
HPS4-209ENST00000466781 GPHNQ9NQX3 736 aaPredicted RBP9.83□□□□□ -0.84
HPS4-209ENST00000466781 TNNQ9UQP3 1299 aa9.83□□□□□ -0.84
HPS4-209ENST00000466781 CRCPO75575 148 aa9.83□□□□□ -0.84
HPS4-209ENST00000466781 ADCY5O95622 1261 aa9.83□□□□□ -0.84
HPS4-209ENST00000466781 LDHBP07195 334 aaKnown RBP9.83□□□□□ -0.84
HPS4-209ENST00000466781 IL15P40933 162 aaPredicted RBP9.83□□□□□ -0.84
HPS4-209ENST00000466781 SLC8A3P57103 927 aa9.83□□□□□ -0.84
HPS4-209ENST00000466781 LMBR1LQ6UX01 489 aa9.83□□□□□ -0.84
HPS4-209ENST00000466781 SMC1BQ8NDV3 1235 aa9.83□□□□□ -0.84
HPS4-209ENST00000466781 CCT6BQ92526 530 aa9.83□□□□□ -0.84
HPS4-209ENST00000466781 GOLGA1Q92805 767 aa9.83□□□□□ -0.84
HPS4-209ENST00000466781 CARD14Q9BXL6 1004 aa9.83□□□□□ -0.84
HPS4-209ENST00000466781 PROCA1Q8NCQ7 364 aaPredicted RBP9.83□□□□□ -0.84
HPS4-209ENST00000466781 HELBQ8NG08 1087 aaPredicted RBP9.83□□□□□ -0.84
HPS4-209ENST00000466781 BRF1Q92994 677 aa9.83□□□□□ -0.84
HPS4-209ENST00000466781 RNF34Q969K3 372 aa9.83□□□□□ -0.84
HPS4-209ENST00000466781 HAUS7Q99871 368 aa9.83□□□□□ -0.84
HPS4-209ENST00000466781 MCM9Q9NXL9 1143 aa9.83□□□□□ -0.84
HPS4-209ENST00000466781 PLEKHG3A1L390 1219 aa9.83□□□□□ -0.84
HPS4-209ENST00000466781 SLC9C2Q5TAH2 1124 aa9.83□□□□□ -0.84
HPS4-209ENST00000466781 ZNF790Q6PG37 636 aa9.83□□□□□ -0.84
HPS4-209ENST00000466781 DAAM2Q86T65 1068 aa9.83□□□□□ -0.84
HPS4-209ENST00000466781 ZNF408Q9H9D4 720 aa9.83□□□□□ -0.84
HPS4-209ENST00000466781 GDPD2Q9HCC8 539 aa9.83□□□□□ -0.84
HPS4-209ENST00000466781 ABCC3O15438 1527 aa9.82□□□□□ -0.84
HPS4-209ENST00000466781 CBX1P83916 185 aa9.82□□□□□ -0.84
HPS4-209ENST00000466781 ARID5AQ03989 594 aa9.82□□□□□ -0.84
HPS4-209ENST00000466781 BIRC2Q13490 618 aa9.82□□□□□ -0.84
HPS4-209ENST00000466781 NEK11Q8NG66 645 aa9.82□□□□□ -0.84
HPS4-209ENST00000466781 MBD5Q9P267 1494 aa9.82□□□□□ -0.84
HPS4-209ENST00000466781 CAVIN2O95810 425 aa9.82□□□□□ -0.84
HPS4-209ENST00000466781 ZNF165P49910 485 aa9.82□□□□□ -0.84
HPS4-209ENST00000466781 MAGEB6Q8N7X4 407 aa9.82□□□□□ -0.84
HPS4-209ENST00000466781 TSPYL6Q8N831 410 aa9.82□□□□□ -0.84
HPS4-209ENST00000466781 PHACTR3Q96KR7 559 aa9.82□□□□□ -0.84
HPS4-209ENST00000466781 SOS1Q07889 1333 aaPredicted RBP9.82□□□□□ -0.84
HPS4-209ENST00000466781 ERVV-2B6SEH9 535 aa9.82□□□□□ -0.84
HPS4-209ENST00000466781 ATP2C2O75185 946 aa9.82□□□□□ -0.84
HPS4-209ENST00000466781 UFL1O94874 794 aa9.82□□□□□ -0.84
HPS4-209ENST00000466781 MSL1Q68DK7 614 aa9.82□□□□□ -0.84
HPS4-209ENST00000466781 FAM196AQ6ZSG2 479 aa9.82□□□□□ -0.84
HPS4-209ENST00000466781 TBC1D9Q6ZT07 1266 aa9.82□□□□□ -0.84
HPS4-209ENST00000466781 Q6ZUG5 572 aa9.82□□□□□ -0.84
HPS4-209ENST00000466781 DHX58Q96C10 678 aa9.82□□□□□ -0.84
HPS4-209ENST00000466781 TTC14Q96N46 770 aa9.82□□□□□ -0.84
HPS4-209ENST00000466781 TET3O43151 1660 aa9.82□□□□□ -0.84
HPS4-209ENST00000466781 METP08581 1390 aa9.82□□□□□ -0.84
HPS4-209ENST00000466781 KMT5BQ4FZB7 885 aa9.82□□□□□ -0.84
HPS4-209ENST00000466781 CFAP157Q5JU67 520 aa9.82□□□□□ -0.84
HPS4-209ENST00000466781 CCDC129Q6ZRS4 1044 aa9.82□□□□□ -0.84
HPS4-209ENST00000466781 KRT27Q7Z3Y8 459 aa9.82□□□□□ -0.84
HPS4-209ENST00000466781 RHPN1Q8TCX5 695 aa9.82□□□□□ -0.84
HPS4-209ENST00000466781 SELENOSQ9BQE4 189 aa9.82□□□□□ -0.84
HPS4-209ENST00000466781 GTPBP4Q9BZE4 634 aaKnown RBP9.82□□□□□ -0.84
HPS4-209ENST00000466781 CDC42BPAQ5VT25 1732 aa9.82□□□□□ -0.84
HPS4-209ENST00000466781 MAP3K4Q9Y6R4 1608 aa9.82□□□□□ -0.84
HPS4-209ENST00000466781 GMNNO75496 209 aa9.81□□□□□ -0.84
HPS4-209ENST00000466781 PDE6BP35913 854 aa9.81□□□□□ -0.84
HPS4-209ENST00000466781 PLBD2Q8NHP8 589 aa9.81□□□□□ -0.84
HPS4-209ENST00000466781 ZSWIM4Q9H7M6 989 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms