RNA–Protein interactions for RNA: ENST00000466508.5

PPP1R3F-203, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 2 BASIC

Gene PPP1R3F, Length 1,885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-203ENST00000466508 C15orf52Q6ZUT6 534 aaKnown RBP25.07■■□□□ 1.6
PPP1R3F-203ENST00000466508 LTBP1Q14766 1721 aa25.07■■□□□ 1.6
PPP1R3F-203ENST00000466508 COL11A2P13942 1736 aaPredicted RBP25.07■■□□□ 1.6
PPP1R3F-203ENST00000466508 APPP05067 770 aa25.06■■□□□ 1.6
PPP1R3F-203ENST00000466508 GPSM2P81274 684 aa25.06■■□□□ 1.6
PPP1R3F-203ENST00000466508 ALX1Q15699 326 aa25.06■■□□□ 1.6
PPP1R3F-203ENST00000466508 Q6ZUG5 572 aa25.06■■□□□ 1.6
PPP1R3F-203ENST00000466508 TMC4Q7Z404 712 aa25.06■■□□□ 1.6
PPP1R3F-203ENST00000466508 CCDC83Q8IWF9 413 aa25.06■■□□□ 1.6
PPP1R3F-203ENST00000466508 ARMT1Q9H993 441 aa25.06■■□□□ 1.6
PPP1R3F-203ENST00000466508 PATL2C9JE40 543 aaKnown RBP25.06■■□□□ 1.6
PPP1R3F-203ENST00000466508 GNAT2P19087 354 aa25.06■■□□□ 1.6
PPP1R3F-203ENST00000466508 CYP7A1P22680 504 aa25.06■■□□□ 1.6
PPP1R3F-203ENST00000466508 EXOSC10Q01780 885 aaKnown RBP25.06■■□□□ 1.6
PPP1R3F-203ENST00000466508 PDGFDQ9GZP0 370 aaPredicted RBP25.06■■□□□ 1.6
PPP1R3F-203ENST00000466508 ZDHHC9Q9Y397 364 aa25.06■■□□□ 1.6
PPP1R3F-203ENST00000466508 DDX11L8A8MPP1 907 aa25.05■■□□□ 1.6
PPP1R3F-203ENST00000466508 ST3GAL1Q11201 340 aa25.05■■□□□ 1.6
PPP1R3F-203ENST00000466508 NSFL1CQ9UNZ2 370 aaKnown RBP25.05■■□□□ 1.6
PPP1R3F-203ENST00000466508 ATP2B4P23634 1241 aa25.04■■□□□ 1.6
PPP1R3F-203ENST00000466508 LCORLQ8N3X6 602 aa25.04■■□□□ 1.6
PPP1R3F-203ENST00000466508 AGXT2Q9BYV1 514 aa25.04■■□□□ 1.6
PPP1R3F-203ENST00000466508 PODXL2Q9NZ53 605 aa25.04■■□□□ 1.6
PPP1R3F-203ENST00000466508 SRGNP10124 158 aa25.04■■□□□ 1.6
PPP1R3F-203ENST00000466508 MSL1Q68DK7 614 aa25.04■■□□□ 1.6
PPP1R3F-203ENST00000466508 ADGRA1Q86SQ6 560 aa25.04■■□□□ 1.6
PPP1R3F-203ENST00000466508 SMC3Q9UQE7 1217 aa25.04■■□□□ 1.6
PPP1R3F-203ENST00000466508 PDE6BP35913 854 aa25.03■■□□□ 1.6
PPP1R3F-203ENST00000466508 ZNF804AQ7Z570 1209 aa25.03■■□□□ 1.6
PPP1R3F-203ENST00000466508 NECAB1Q8N987 351 aa25.03■■□□□ 1.6
PPP1R3F-203ENST00000466508 MIGA1Q8NAN2 632 aa25.03■■□□□ 1.6
PPP1R3F-203ENST00000466508 SPON1Q9HCB6 807 aa25.03■■□□□ 1.6
PPP1R3F-203ENST00000466508 EPB41L4AQ9HCS5 686 aaPredicted RBP25.03■■□□□ 1.6
PPP1R3F-203ENST00000466508 GGA1Q9UJY5 639 aa25.03■■□□□ 1.6
PPP1R3F-203ENST00000466508 KIAA1551Q9HCM1 1747 aa25.03■■□□□ 1.6
PPP1R3F-203ENST00000466508 UFL1O94874 794 aa25.02■■□□□ 1.6
PPP1R3F-203ENST00000466508 BRD1O95696 1058 aa25.02■■□□□ 1.6
PPP1R3F-203ENST00000466508 NPR1P16066 1061 aa25.02■■□□□ 1.6
PPP1R3F-203ENST00000466508 FGD1P98174 961 aa25.02■■□□□ 1.6
PPP1R3F-203ENST00000466508 IFNL3Q8IZI9 196 aa25.02■■□□□ 1.6
PPP1R3F-203ENST00000466508 GSG1L2A8MUP6 293 aa25.02■■□□□ 1.6
PPP1R3F-203ENST00000466508 PPEF1O14829 653 aaPredicted RBP25.02■■□□□ 1.6
PPP1R3F-203ENST00000466508 CHAF1AQ13111 956 aaPredicted RBP25.02■■□□□ 1.6
PPP1R3F-203ENST00000466508 NAA16Q6N069 864 aaPredicted RBP25.02■■□□□ 1.6
PPP1R3F-203ENST00000466508 TMED8Q6PL24 325 aaPredicted RBP25.02■■□□□ 1.6
PPP1R3F-203ENST00000466508 FBXL16Q8N461 479 aa25.02■■□□□ 1.6
PPP1R3F-203ENST00000466508 BRF1Q92994 677 aa25.02■■□□□ 1.6
PPP1R3F-203ENST00000466508 LRRC2Q9BYS8 371 aa25.02■■□□□ 1.6
PPP1R3F-203ENST00000466508 NBPF3Q9H094 633 aa25.02■■□□□ 1.6
PPP1R3F-203ENST00000466508 NAPBQ9H115 298 aa25.02■■□□□ 1.6
PPP1R3F-203ENST00000466508 TDRD7Q8NHU6 1098 aaKnown RBP25.01■■□□□ 1.59
PPP1R3F-203ENST00000466508 NCOA7Q8NI08 942 aa25.01■■□□□ 1.59
PPP1R3F-203ENST00000466508 ZNF384Q8TF68 577 aa25.01■■□□□ 1.59
PPP1R3F-203ENST00000466508 NSUN4Q96CB9 384 aaKnown RBP25.01■■□□□ 1.59
PPP1R3F-203ENST00000466508 SLC4A4Q9Y6R1 1079 aa25.01■■□□□ 1.59
PPP1R3F-203ENST00000466508 TIAM2Q8IVF5 1701 aa25.01■■□□□ 1.59
PPP1R3F-203ENST00000466508 MAGEB6P1A0A0J9YX57 407 aa25■■□□□ 1.59
PPP1R3F-203ENST00000466508 BAG4O95429 457 aaKnown RBP25■■□□□ 1.59
PPP1R3F-203ENST00000466508 RALYLQ86SE5 291 aaKnown RBP25■■□□□ 1.59
PPP1R3F-203ENST00000466508 SP8Q8IXZ3 490 aa25■■□□□ 1.59
PPP1R3F-203ENST00000466508 MB21D2Q8IYB1 491 aaPredicted RBP25■■□□□ 1.59
PPP1R3F-203ENST00000466508 NACAP1Q9BZK3 213 aa25■■□□□ 1.59
PPP1R3F-203ENST00000466508 SALL1Q9NSC2 1324 aa25■■□□□ 1.59
PPP1R3F-203ENST00000466508 ZBTB7AO95365 584 aa25■■□□□ 1.59
PPP1R3F-203ENST00000466508 ATP6V0A2Q9Y487 856 aa25■■□□□ 1.59
PPP1R3F-203ENST00000466508 DUOX1Q9NRD9 1551 aa24.99■■□□□ 1.59
PPP1R3F-203ENST00000466508 PRKAB2O43741 272 aa24.99■■□□□ 1.59
PPP1R3F-203ENST00000466508 IGSF3O75054 1194 aa24.99■■□□□ 1.59
PPP1R3F-203ENST00000466508 MCM5P33992 734 aa24.99■■□□□ 1.59
PPP1R3F-203ENST00000466508 MECOMQ03112 1051 aa24.99■■□□□ 1.59
PPP1R3F-203ENST00000466508 TBC1D10CQ8IV04 446 aa24.99■■□□□ 1.59
PPP1R3F-203ENST00000466508 WDR66Q8TBY9 1149 aa24.99■■□□□ 1.59
PPP1R3F-203ENST00000466508 GPR101Q96P66 508 aaPredicted RBP24.99■■□□□ 1.59
PPP1R3F-203ENST00000466508 RIOK1Q9BRS2 568 aaKnown RBP24.99■■□□□ 1.59
PPP1R3F-203ENST00000466508 GJB2P29033 226 aa24.98■■□□□ 1.59
PPP1R3F-203ENST00000466508 PRDX5P30044 214 aa24.98■■□□□ 1.59
PPP1R3F-203ENST00000466508 TBC1D16Q8TBP0 767 aa24.98■■□□□ 1.59
PPP1R3F-203ENST00000466508 GTF3C6Q969F1 213 aa24.98■■□□□ 1.59
PPP1R3F-203ENST00000466508 WDR19Q8NEZ3 1342 aa24.98■■□□□ 1.59
PPP1R3F-203ENST00000466508 WDR33Q9C0J8 1336 aaKnown RBP24.98■■□□□ 1.59
PPP1R3F-203ENST00000466508 ALDH1B1P30837 517 aa24.98■■□□□ 1.59
PPP1R3F-203ENST00000466508 TRDNQ13061 729 aa24.98■■□□□ 1.59
PPP1R3F-203ENST00000466508 SPTY2D1Q68D10 685 aaPredicted RBP24.98■■□□□ 1.59
PPP1R3F-203ENST00000466508 TDO2P48775 406 aa24.97■■□□□ 1.59
PPP1R3F-203ENST00000466508 STK3Q13188 491 aa24.97■■□□□ 1.59
PPP1R3F-203ENST00000466508 CHST3Q7LGC8 479 aa24.97■■□□□ 1.59
PPP1R3F-203ENST00000466508 MASTLQ96GX5 879 aa24.97■■□□□ 1.59
PPP1R3F-203ENST00000466508 POLLQ9UGP5 575 aa24.97■■□□□ 1.59
PPP1R3F-203ENST00000466508 GOLGA6L22H0YM25 854 aa24.96■■□□□ 1.59
PPP1R3F-203ENST00000466508 PTMSP20962 102 aa24.96■■□□□ 1.59
PPP1R3F-203ENST00000466508 MTFR1LQ9H019 292 aa24.96■■□□□ 1.59
PPP1R3F-203ENST00000466508 BAZ2AQ9UIF9 1905 aaKnown RBP24.96■■□□□ 1.59
PPP1R3F-203ENST00000466508 PRC1O43663 620 aa24.96■■□□□ 1.59
PPP1R3F-203ENST00000466508 CD209Q9NNX6 404 aa24.96■■□□□ 1.59
PPP1R3F-203ENST00000466508 JAG2Q9Y219 1238 aa24.96■■□□□ 1.59
PPP1R3F-203ENST00000466508 ATF5Q9Y2D1 282 aaPredicted RBP24.96■■□□□ 1.59
PPP1R3F-203ENST00000466508 IL1R1P14778 569 aa24.95■■□□□ 1.58
PPP1R3F-203ENST00000466508 SYT1P21579 422 aa24.95■■□□□ 1.58
PPP1R3F-203ENST00000466508 APOBRQ0VD83 1088 aa24.95■■□□□ 1.58
PPP1R3F-203ENST00000466508 PFKFB2O60825 505 aa24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms