RNA–Protein interactions for RNA: ENST00000466448.4

SRSF4-202, Transcript of serine and arginine rich splicing factor 4, humanhuman

APPRIS ALT2 TSL 3

Gene SRSF4, Length 1,264 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-202ENST00000466448 OTUD7BQ6GQQ9 843 aa23.74■■□□□ 1.39
SRSF4-202ENST00000466448 OPTNQ96CV9 577 aa23.74■■□□□ 1.39
SRSF4-202ENST00000466448 IQSEC3Q9UPP2 1182 aaPredicted RBP23.74■■□□□ 1.39
SRSF4-202ENST00000466448 TCP10L2B9ZVM9 353 aa23.73■■□□□ 1.39
SRSF4-202ENST00000466448 LRRC24Q50LG9 513 aa23.73■■□□□ 1.39
SRSF4-202ENST00000466448 FBXO33Q7Z6M2 555 aa23.73■■□□□ 1.39
SRSF4-202ENST00000466448 TMEM39BQ9GZU3 492 aa23.73■■□□□ 1.39
SRSF4-202ENST00000466448 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.72■■□□□ 1.39
SRSF4-202ENST00000466448 VPS37DQ86XT2 251 aa23.72■■□□□ 1.39
SRSF4-202ENST00000466448 ANKRD44Q8N8A2 993 aa23.72■■□□□ 1.39
SRSF4-202ENST00000466448 CD99L2Q8TCZ2 262 aa23.72■■□□□ 1.39
SRSF4-202ENST00000466448 ERO1AQ96HE7 468 aa23.72■■□□□ 1.39
SRSF4-202ENST00000466448 ARAP2Q8WZ64 1704 aa23.72■■□□□ 1.39
SRSF4-202ENST00000466448 ZNF521Q96K83 1311 aa23.71■■□□□ 1.39
SRSF4-202ENST00000466448 CHAF1AQ13111 956 aaPredicted RBP23.71■■□□□ 1.39
SRSF4-202ENST00000466448 VGLL2Q8N8G2 317 aa23.71■■□□□ 1.39
SRSF4-202ENST00000466448 CNKSR2Q8WXI2 1034 aa23.71■■□□□ 1.39
SRSF4-202ENST00000466448 MS4A4AQ96JQ5 239 aa23.71■■□□□ 1.39
SRSF4-202ENST00000466448 VGLL4Q14135 290 aa23.7■■□□□ 1.38
SRSF4-202ENST00000466448 METTL24Q5JXM2 366 aa23.7■■□□□ 1.38
SRSF4-202ENST00000466448 MRPL50Q8N5N7 158 aaKnown RBP23.7■■□□□ 1.38
SRSF4-202ENST00000466448 PTPN22Q9Y2R2 807 aa23.7■■□□□ 1.38
SRSF4-202ENST00000466448 OTOFQ9HC10 1997 aa23.7■■□□□ 1.38
SRSF4-202ENST00000466448 ZNF316A6NFI3 1004 aaPredicted RBP23.69■■□□□ 1.38
SRSF4-202ENST00000466448 PDE8BO95263 885 aa23.69■■□□□ 1.38
SRSF4-202ENST00000466448 TNNI2P48788 182 aa23.69■■□□□ 1.38
SRSF4-202ENST00000466448 CAVIN4Q5BKX8 364 aa23.69■■□□□ 1.38
SRSF4-202ENST00000466448 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.69■■□□□ 1.383e-10■■□□□ 11.9
SRSF4-202ENST00000466448 TBC1D22AQ8WUA7 517 aa23.69■■□□□ 1.38
SRSF4-202ENST00000466448 FRAT2O75474 233 aaPredicted RBP23.68■■□□□ 1.38
SRSF4-202ENST00000466448 CACNB3P54284 484 aa23.68■■□□□ 1.38
SRSF4-202ENST00000466448 MAP3K9P80192 1104 aa23.68■■□□□ 1.38
SRSF4-202ENST00000466448 HDLBPQ00341 1268 aaKnown RBP23.68■■□□□ 1.38
SRSF4-202ENST00000466448 CAP1Q01518 475 aa23.68■■□□□ 1.38
SRSF4-202ENST00000466448 SP3Q02447 781 aa23.68■■□□□ 1.38
SRSF4-202ENST00000466448 KLHDC4Q8TBB5 520 aa23.68■■□□□ 1.38
SRSF4-202ENST00000466448 BRI3BPQ8WY22 251 aa23.68■■□□□ 1.38
SRSF4-202ENST00000466448 POTEFA5A3E0 1075 aa23.67■■□□□ 1.38
SRSF4-202ENST00000466448 BCAMP50895 628 aa23.67■■□□□ 1.38
SRSF4-202ENST00000466448 INTS3Q68E01 1043 aaKnown RBP23.67■■□□□ 1.38
SRSF4-202ENST00000466448 TEKT1Q969V4 418 aa23.67■■□□□ 1.38
SRSF4-202ENST00000466448 EFCC1Q9HA90 598 aa23.67■■□□□ 1.38
SRSF4-202ENST00000466448 PTPRCP08575 1304 aa23.66■■□□□ 1.38
SRSF4-202ENST00000466448 CCL15-CCL14A0A0B4J2E2 113 aa23.66■■□□□ 1.38
SRSF4-202ENST00000466448 CCL15Q16663 113 aa23.66■■□□□ 1.38
SRSF4-202ENST00000466448 OTUD5Q96G74 571 aa23.66■■□□□ 1.38
SRSF4-202ENST00000466448 CSADQ9Y600 493 aa23.66■■□□□ 1.38
SRSF4-202ENST00000466448 GTF2A2P52657 109 aa23.65■■□□□ 1.38
SRSF4-202ENST00000466448 PCDH10Q9P2E7 1040 aa23.65■■□□□ 1.38
SRSF4-202ENST00000466448 FAM43AQ8N2R8 423 aa23.64■■□□□ 1.37
SRSF4-202ENST00000466448 ARMC5Q96C12 935 aa23.64■■□□□ 1.37
SRSF4-202ENST00000466448 ZDHHC15Q96MV8 337 aa23.64■■□□□ 1.37
SRSF4-202ENST00000466448 USP44Q9H0E7 712 aa23.64■■□□□ 1.37
SRSF4-202ENST00000466448 FGFR2P21802 821 aa23.63■■□□□ 1.37
SRSF4-202ENST00000466448 CENPFP49454 3210 aa23.63■■□□□ 1.37
SRSF4-202ENST00000466448 PUM3Q15397 648 aaKnown RBP23.63■■□□□ 1.37
SRSF4-202ENST00000466448 TAF1CQ15572 869 aaPredicted RBP23.63■■□□□ 1.37
SRSF4-202ENST00000466448 APOBEC3HQ6NTF7 200 aaKnown RBP23.63■■□□□ 1.37
SRSF4-202ENST00000466448 SSH1Q8WYL5 1049 aa23.63■■□□□ 1.37
SRSF4-202ENST00000466448 MRIQ9BWK5 157 aa23.63■■□□□ 1.37
SRSF4-202ENST00000466448 SNCAIPQ9Y6H5 919 aa23.63■■□□□ 1.37
SRSF4-202ENST00000466448 KIF16BQ96L93 1317 aa23.62■■□□□ 1.37
SRSF4-202ENST00000466448 SPDYE5A6NIY4 337 aa23.62■■□□□ 1.37
SRSF4-202ENST00000466448 ZFYVE28Q9HCC9 887 aa23.62■■□□□ 1.37
SRSF4-202ENST00000466448 TMOD2Q9NZR1 351 aa23.62■■□□□ 1.37
SRSF4-202ENST00000466448 IFIT1P09914 478 aaKnown RBP23.61■■□□□ 1.37
SRSF4-202ENST00000466448 FAM83AQ86UY5 434 aa23.61■■□□□ 1.37
SRSF4-202ENST00000466448 WRNIP1Q96S55 665 aa23.61■■□□□ 1.37
SRSF4-202ENST00000466448 SUGT1Q9Y2Z0 365 aa23.61■■□□□ 1.37
SRSF4-202ENST00000466448 MAST3O60307 1309 aa23.6■■□□□ 1.37
SRSF4-202ENST00000466448 BRCA2P51587 3418 aa23.6■■□□□ 1.37
SRSF4-202ENST00000466448 ZEB1P37275 1124 aaPredicted RBP23.6■■□□□ 1.37
SRSF4-202ENST00000466448 RFX5P48382 616 aaPredicted RBP23.6■■□□□ 1.37
SRSF4-202ENST00000466448 FKBP1CQ5VVH2 108 aa23.6■■□□□ 1.37
SRSF4-202ENST00000466448 ZKSCAN4Q969J2 545 aaPredicted RBP23.6■■□□□ 1.37
SRSF4-202ENST00000466448 MKI67P46013 3256 aaKnown RBP23.6■■□□□ 1.37
SRSF4-202ENST00000466448 HHIPL2Q6UWX4 724 aa23.59■■□□□ 1.37
SRSF4-202ENST00000466448 ERO1BQ86YB8 467 aa23.59■■□□□ 1.37
SRSF4-202ENST00000466448 E9PSI1 815 aa23.58■■□□□ 1.37
SRSF4-202ENST00000466448 EYA2O00167 538 aa23.58■■□□□ 1.37
SRSF4-202ENST00000466448 CETPP11597 493 aa23.58■■□□□ 1.37
SRSF4-202ENST00000466448 RPAP1Q9BWH6 1393 aaPredicted RBP23.57■■□□□ 1.36
SRSF4-202ENST00000466448 IRF6O14896 467 aa23.57■■□□□ 1.36
SRSF4-202ENST00000466448 EN2P19622 333 aaPredicted RBP23.57■■□□□ 1.36
SRSF4-202ENST00000466448 LPIN2Q92539 896 aa23.57■■□□□ 1.36
SRSF4-202ENST00000466448 HOOK2Q96ED9 719 aa23.57■■□□□ 1.36
SRSF4-202ENST00000466448 ZNF333Q96JL9 665 aa23.57■■□□□ 1.36
SRSF4-202ENST00000466448 PTCH2Q9Y6C5 1203 aa23.57■■□□□ 1.36
SRSF4-202ENST00000466448 SLC5A1P13866 664 aa23.56■■□□□ 1.36
SRSF4-202ENST00000466448 ARHGEF6Q15052 776 aa23.56■■□□□ 1.36
SRSF4-202ENST00000466448 ATG9AQ7Z3C6 839 aa23.56■■□□□ 1.36
SRSF4-202ENST00000466448 RBBP6Q7Z6E9 1792 aaKnown RBP23.55■■□□□ 1.36
SRSF4-202ENST00000466448 BTBD19C9JJ37 291 aa23.55■■□□□ 1.36
SRSF4-202ENST00000466448 TLR2O60603 784 aa23.55■■□□□ 1.36
SRSF4-202ENST00000466448 PPIL2Q13356 520 aa23.55■■□□□ 1.36
SRSF4-202ENST00000466448 SNAPC2Q13487 334 aa23.55■■□□□ 1.36
SRSF4-202ENST00000466448 DCAF15Q66K64 600 aa23.55■■□□□ 1.36
SRSF4-202ENST00000466448 MIGA2Q7L4E1 593 aa23.55■■□□□ 1.36
SRSF4-202ENST00000466448 WDR66Q8TBY9 1149 aa23.55■■□□□ 1.36
SRSF4-202ENST00000466448 WDHD1O75717 1129 aaPredicted RBP23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms