RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 ITSN1Q15811 1721 aa8.46□□□□□ -1.05
NCL-208ENST00000466274 KRBA1A5PL33 1030 aa8.46□□□□□ -1.06
NCL-208ENST00000466274 A6NJY4 79 aa8.46□□□□□ -1.06
NCL-208ENST00000466274 ATXN7O15265 892 aaPredicted RBP8.46□□□□□ -1.06
NCL-208ENST00000466274 PRKCSHP14314 528 aaPredicted RBP8.46□□□□□ -1.06
NCL-208ENST00000466274 HOXB4P17483 251 aaPredicted RBP8.46□□□□□ -1.06
NCL-208ENST00000466274 COL8A1P27658 744 aa8.46□□□□□ -1.06
NCL-208ENST00000466274 LINC00114Q6XXX2 140 aa8.46□□□□□ -1.06
NCL-208ENST00000466274 NLRP8Q86W28 1048 aa8.46□□□□□ -1.06
NCL-208ENST00000466274 C1orf216Q8TAB5 229 aa8.46□□□□□ -1.06
NCL-208ENST00000466274 CABP1Q9NZU7 370 aa8.46□□□□□ -1.06
NCL-208ENST00000466274 PARP3Q9Y6F1 533 aa8.46□□□□□ -1.06
NCL-208ENST00000466274 CICQ96RK0 1608 aaPredicted RBP8.46□□□□□ -1.06
NCL-208ENST00000466274 A0A0G2JLW4 131 aa8.45□□□□□ -1.06
NCL-208ENST00000466274 DCDC2BA2VCK2 349 aa8.45□□□□□ -1.06
NCL-208ENST00000466274 NEURL1BA8MQ27 555 aa8.45□□□□□ -1.06
NCL-208ENST00000466274 PROCP04070 461 aa8.45□□□□□ -1.06
NCL-208ENST00000466274 SKIP12755 728 aa8.45□□□□□ -1.06
NCL-208ENST00000466274 SSFA2P28290 1259 aa8.45□□□□□ -1.06
NCL-208ENST00000466274 MTFR1Q15390 333 aa8.45□□□□□ -1.06
NCL-208ENST00000466274 SLCO4C1Q6ZQN7 724 aa8.45□□□□□ -1.06
NCL-208ENST00000466274 ANKRD24Q8TF21 1146 aa8.45□□□□□ -1.06
NCL-208ENST00000466274 BTBD6Q96KE9 485 aa8.45□□□□□ -1.06
NCL-208ENST00000466274 ALG2Q9H553 416 aa8.45□□□□□ -1.06
NCL-208ENST00000466274 MKRN1Q9UHC7 482 aaKnown RBP8.45□□□□□ -1.06
NCL-208ENST00000466274 PXDNLA1KZ92 1463 aa8.45□□□□□ -1.06
NCL-208ENST00000466274 KCPQ6ZWJ8 1503 aa8.44□□□□□ -1.06
NCL-208ENST00000466274 MMP10P09238 476 aa8.44□□□□□ -1.06
NCL-208ENST00000466274 ARAFP10398 606 aa8.44□□□□□ -1.06
NCL-208ENST00000466274 MAPTP10636 758 aaKnown RBP8.44□□□□□ -1.06
NCL-208ENST00000466274 EPXP11678 715 aa8.44□□□□□ -1.06
NCL-208ENST00000466274 CD33P20138 364 aa8.44□□□□□ -1.06
NCL-208ENST00000466274 LBX1P52954 281 aa8.44□□□□□ -1.06
NCL-208ENST00000466274 TNP2Q05952 138 aa8.44□□□□□ -1.06
NCL-208ENST00000466274 EML3Q32P44 896 aa8.44□□□□□ -1.06
NCL-208ENST00000466274 NBPF1Q3BBV0 1214 aa8.44□□□□□ -1.06
NCL-208ENST00000466274 DCAF11Q8TEB1 546 aa8.44□□□□□ -1.06
NCL-208ENST00000466274 POM121Q96HA1 1249 aa8.44□□□□□ -1.06
NCL-208ENST00000466274 ZIC5Q96T25 663 aa8.44□□□□□ -1.06
NCL-208ENST00000466274 SUV39H2Q9H5I1 410 aa8.44□□□□□ -1.06
NCL-208ENST00000466274 CCDC87Q9NVE4 849 aa8.44□□□□□ -1.06
NCL-208ENST00000466274 TTC21AQ8NDW8 1320 aa8.44□□□□□ -1.06
NCL-208ENST00000466274 GLTPD2A6NH11 291 aa8.43□□□□□ -1.06
NCL-208ENST00000466274 KHNYNO15037 678 aaKnown RBP8.43□□□□□ -1.06
NCL-208ENST00000466274 ZCRB1Q8TBF4 217 aaKnown RBP8.43□□□□□ -1.06
NCL-208ENST00000466274 SMARCC1Q92922 1105 aaPredicted RBP8.43□□□□□ -1.06
NCL-208ENST00000466274 PIM2Q9P1W9 311 aa8.43□□□□□ -1.06
NCL-208ENST00000466274 KLF15Q9UIH9 416 aa8.43□□□□□ -1.06
NCL-208ENST00000466274 TTC21BQ7Z4L5 1316 aa8.43□□□□□ -1.06
NCL-208ENST00000466274 BTAF1O14981 1849 aa8.43□□□□□ -1.06
NCL-208ENST00000466274 DPEP1P16444 411 aa8.42□□□□□ -1.06
NCL-208ENST00000466274 TATP17735 454 aaPredicted RBP8.42□□□□□ -1.06
NCL-208ENST00000466274 GTF2IP78347 998 aa8.42□□□□□ -1.06
NCL-208ENST00000466274 DALRD3Q5D0E6 543 aaKnown RBP8.42□□□□□ -1.06
NCL-208ENST00000466274 DEPDC4Q8N2C3 294 aa8.42□□□□□ -1.06
NCL-208ENST00000466274 NLGN1Q8N2Q7 840 aa8.42□□□□□ -1.06
NCL-208ENST00000466274 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.42□□□□□ -1.06
NCL-208ENST00000466274 NOD1Q9Y239 953 aa8.42□□□□□ -1.06
NCL-208ENST00000466274 NSD2O96028 1365 aa8.41□□□□□ -1.06
NCL-208ENST00000466274 CNTNAP1P78357 1384 aa8.41□□□□□ -1.06
NCL-208ENST00000466274 MAP2K1Q02750 393 aaPredicted RBP8.41□□□□□ -1.06
NCL-208ENST00000466274 NCOA4Q13772 614 aa8.41□□□□□ -1.06
NCL-208ENST00000466274 GRIN2CQ14957 1233 aa8.41□□□□□ -1.06
NCL-208ENST00000466274 ZNF358Q9NW07 568 aa8.41□□□□□ -1.06
NCL-208ENST00000466274 ZDHHC3Q9NYG2 299 aa8.41□□□□□ -1.06
NCL-208ENST00000466274 PALLDQ8WX93 1383 aa8.4□□□□□ -1.06
NCL-208ENST00000466274 BACH1O14867 736 aa8.4□□□□□ -1.06
NCL-208ENST00000466274 ADAM23O75077 832 aa8.4□□□□□ -1.06
NCL-208ENST00000466274 TXLNAP40222 546 aa8.4□□□□□ -1.06
NCL-208ENST00000466274 TMF1P82094 1093 aa8.4□□□□□ -1.06
NCL-208ENST00000466274 BICDL1Q6ZP65 573 aa8.4□□□□□ -1.06
NCL-208ENST00000466274 ZDHHC1Q8WTX9 485 aa8.4□□□□□ -1.06
NCL-208ENST00000466274 SCHIP1Q9P0W5 487 aaPredicted RBP8.4□□□□□ -1.06
NCL-208ENST00000466274 GJA3Q9Y6H8 435 aa8.4□□□□□ -1.06
NCL-208ENST00000466274 WNK3Q9BYP7 1800 aa8.4□□□□□ -1.07
NCL-208ENST00000466274 COL18A1P39060 1754 aa8.4□□□□□ -1.07
NCL-208ENST00000466274 HSPA8P11142 646 aaKnown RBP8.39□□□□□ -1.07
NCL-208ENST00000466274 ADH6P28332 368 aa8.39□□□□□ -1.07
NCL-208ENST00000466274 PCBP4P57723 403 aaKnown RBP8.39□□□□□ -1.07
NCL-208ENST00000466274 TBCELQ5QJ74 424 aa8.39□□□□□ -1.07
NCL-208ENST00000466274 FCHSD1Q86WN1 690 aa8.39□□□□□ -1.07
NCL-208ENST00000466274 CGNL1Q0VF96 1302 aa8.38□□□□□ -1.07
NCL-208ENST00000466274 CENPJQ9HC77 1338 aaPredicted RBP8.38□□□□□ -1.07
NCL-208ENST00000466274 GNB5O14775 395 aa8.38□□□□□ -1.07
NCL-208ENST00000466274 LZTS3O60299 673 aaPredicted RBP8.38□□□□□ -1.07
NCL-208ENST00000466274 LMNB1P20700 586 aa8.38□□□□□ -1.07
NCL-208ENST00000466274 DGKGP49619 791 aa8.38□□□□□ -1.07
NCL-208ENST00000466274 NFATC2IPQ8NCF5 419 aa8.38□□□□□ -1.07
NCL-208ENST00000466274 L3MBTL2Q969R5 705 aa8.38□□□□□ -1.07
NCL-208ENST00000466274 PRR12Q9ULL5 1215 aa8.38□□□□□ -1.07
NCL-208ENST00000466274 EVC2Q86UK5 1308 aa8.37□□□□□ -1.07
NCL-208ENST00000466274 TMEM88BA6NKF7 163 aa8.37□□□□□ -1.07
NCL-208ENST00000466274 POM121CA8CG34 1229 aa8.37□□□□□ -1.07
NCL-208ENST00000466274 USP17L5A8MUK1 530 aa8.37□□□□□ -1.07
NCL-208ENST00000466274 FAM157BP0CG42 384 aa8.37□□□□□ -1.07
NCL-208ENST00000466274 TRAPPC3LQ5T215 181 aa8.37□□□□□ -1.07
NCL-208ENST00000466274 MPRIPQ6WCQ1 1025 aa8.37□□□□□ -1.07
NCL-208ENST00000466274 CHSY3Q70JA7 882 aa8.37□□□□□ -1.07
NCL-208ENST00000466274 SMIM5Q71RC9 77 aa8.37□□□□□ -1.07
NCL-208ENST00000466274 ALYREFQ86V81 257 aaKnown RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms