RNA–Protein interactions for RNA: ENST00000466032.1

CHMP3-206, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 436 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-206ENST00000466032 GRAPQ13588 217 aa7.34□□□□□ -1.23
CHMP3-206ENST00000466032 UBE4AQ14139 1066 aa7.34□□□□□ -1.23
CHMP3-206ENST00000466032 CCDC158Q5M9N0 1113 aa7.34□□□□□ -1.23
CHMP3-206ENST00000466032 CC2D2BQ6DHV5 1058 aa7.34□□□□□ -1.23
CHMP3-206ENST00000466032 TMED8Q6PL24 325 aaPredicted RBP7.34□□□□□ -1.23
CHMP3-206ENST00000466032 CASC1Q6TDU7 716 aa7.34□□□□□ -1.23
CHMP3-206ENST00000466032 AMIGO3Q86WK7 504 aa7.34□□□□□ -1.23
CHMP3-206ENST00000466032 GRAPLQ8TC17 118 aaPredicted RBP7.34□□□□□ -1.23
CHMP3-206ENST00000466032 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.34□□□□□ -1.23
CHMP3-206ENST00000466032 LPIN2Q92539 896 aa7.34□□□□□ -1.23
CHMP3-206ENST00000466032 RIPOR2Q9Y4F9 1068 aa7.34□□□□□ -1.23
CHMP3-206ENST00000466032 NRXN2Q9P2S2 1712 aa7.33□□□□□ -1.24
CHMP3-206ENST00000466032 H0YIN7 160 aa7.33□□□□□ -1.24
CHMP3-206ENST00000466032 HIP1O00291 1037 aa7.33□□□□□ -1.24
CHMP3-206ENST00000466032 SASH1O94885 1247 aa7.33□□□□□ -1.24
CHMP3-206ENST00000466032 PDE1AP54750 535 aa7.33□□□□□ -1.24
CHMP3-206ENST00000466032 PUM3Q15397 648 aaKnown RBP7.33□□□□□ -1.24
CHMP3-206ENST00000466032 TNNI3KQ59H18 835 aa7.33□□□□□ -1.24
CHMP3-206ENST00000466032 METTL24Q5JXM2 366 aa7.33□□□□□ -1.24
CHMP3-206ENST00000466032 STYK1Q6J9G0 422 aa7.33□□□□□ -1.24
CHMP3-206ENST00000466032 ATG9AQ7Z3C6 839 aa7.33□□□□□ -1.24
CHMP3-206ENST00000466032 PLEKHM2Q8IWE5 1019 aa7.33□□□□□ -1.24
CHMP3-206ENST00000466032 JARID2Q92833 1246 aaPredicted RBP7.33□□□□□ -1.24
CHMP3-206ENST00000466032 CNKSR1Q969H4 720 aa7.33□□□□□ -1.24
CHMP3-206ENST00000466032 MASTLQ96GX5 879 aa7.33□□□□□ -1.24
CHMP3-206ENST00000466032 ZNF512BQ96KM6 892 aaPredicted RBP7.33□□□□□ -1.24
CHMP3-206ENST00000466032 SIL1Q9H173 461 aa7.33□□□□□ -1.24
CHMP3-206ENST00000466032 ECHDC1Q9NTX5 307 aa7.33□□□□□ -1.24
CHMP3-206ENST00000466032 PA2G4Q9UQ80 394 aaKnown RBP7.33□□□□□ -1.24
CHMP3-206ENST00000466032 LEMD3Q9Y2U8 911 aa7.33□□□□□ -1.24
CHMP3-206ENST00000466032 FPGT-TNNI3KV9GXZ4 949 aa7.33□□□□□ -1.24
CHMP3-206ENST00000466032 EPB41L2O43491 1005 aaKnown RBP7.32□□□□□ -1.24
CHMP3-206ENST00000466032 PPP1R37O75864 691 aa7.32□□□□□ -1.24
CHMP3-206ENST00000466032 UQCRFS1P1P0C7P4 283 aa7.32□□□□□ -1.24
CHMP3-206ENST00000466032 SLC5A1P13866 664 aa7.32□□□□□ -1.24
CHMP3-206ENST00000466032 RGS3P49796 1198 aa7.32□□□□□ -1.24
CHMP3-206ENST00000466032 APLP1P51693 650 aa7.32□□□□□ -1.24
CHMP3-206ENST00000466032 TGFB2P61812 414 aa7.32□□□□□ -1.24
CHMP3-206ENST00000466032 DDR1Q08345 913 aa7.32□□□□□ -1.24
CHMP3-206ENST00000466032 GORABQ5T7V8 394 aa7.32□□□□□ -1.24
CHMP3-206ENST00000466032 SOGA3Q5TF21 947 aa7.32□□□□□ -1.24
CHMP3-206ENST00000466032 AACSQ86V21 672 aa7.32□□□□□ -1.24
CHMP3-206ENST00000466032 IFNLR1Q8IU57 520 aaPredicted RBP7.32□□□□□ -1.24
CHMP3-206ENST00000466032 SYNE4Q8N205 404 aa7.32□□□□□ -1.24
CHMP3-206ENST00000466032 IL27Q8NEV9 243 aa7.32□□□□□ -1.24
CHMP3-206ENST00000466032 GNL3LQ9NVN8 582 aaKnown RBP7.32□□□□□ -1.24
CHMP3-206ENST00000466032 PCDHGA10Q9Y5H3 936 aa7.32□□□□□ -1.24
CHMP3-206ENST00000466032 DDX60Q8IY21 1712 aaKnown RBP7.32□□□□□ -1.24
CHMP3-206ENST00000466032 SALL3Q9BXA9 1300 aa7.31□□□□□ -1.24
CHMP3-206ENST00000466032 APBB1O00213 710 aa7.31□□□□□ -1.24
CHMP3-206ENST00000466032 SEMA3EO15041 775 aa7.31□□□□□ -1.24
CHMP3-206ENST00000466032 SRGNP10124 158 aa7.31□□□□□ -1.24
CHMP3-206ENST00000466032 ATP5JP18859 108 aa7.31□□□□□ -1.24
CHMP3-206ENST00000466032 ATP2B4P23634 1241 aa7.31□□□□□ -1.24
CHMP3-206ENST00000466032 TFCP2Q12800 502 aa7.31□□□□□ -1.24
CHMP3-206ENST00000466032 TTF1Q15361 905 aaPredicted RBP7.31□□□□□ -1.24
CHMP3-206ENST00000466032 ATP2B3Q16720 1220 aa7.31□□□□□ -1.24
CHMP3-206ENST00000466032 CAVIN4Q5BKX8 364 aa7.31□□□□□ -1.24
CHMP3-206ENST00000466032 TTC22Q5TAA0 569 aa7.31□□□□□ -1.24
CHMP3-206ENST00000466032 SP8Q8IXZ3 490 aa7.31□□□□□ -1.24
CHMP3-206ENST00000466032 CNTROBQ8N137 903 aa7.31□□□□□ -1.24
CHMP3-206ENST00000466032 VPS33BQ9H267 617 aa7.31□□□□□ -1.24
CHMP3-206ENST00000466032 UPF2Q9HAU5 1272 aaKnown RBP7.31□□□□□ -1.24
CHMP3-206ENST00000466032 IL1RAPL2Q9NP60 686 aa7.31□□□□□ -1.24
CHMP3-206ENST00000466032 PODXL2Q9NZ53 605 aa7.31□□□□□ -1.24
CHMP3-206ENST00000466032 MINPP1Q9UNW1 487 aa7.31□□□□□ -1.24
CHMP3-206ENST00000466032 TUBGCP6Q96RT7 1819 aa7.31□□□□□ -1.24
CHMP3-206ENST00000466032 LRP5O75197 1615 aa7.3□□□□□ -1.24
CHMP3-206ENST00000466032 XDHP47989 1333 aa7.3□□□□□ -1.24
CHMP3-206ENST00000466032 A0A1B0GUL7 405 aa7.3□□□□□ -1.24
CHMP3-206ENST00000466032 EVI5O60447 810 aa7.3□□□□□ -1.24
CHMP3-206ENST00000466032 FGFR2P21802 821 aa7.3□□□□□ -1.24
CHMP3-206ENST00000466032 PDE4AP27815 886 aa7.3□□□□□ -1.24
CHMP3-206ENST00000466032 KCNJ4P48050 445 aa7.3□□□□□ -1.24
CHMP3-206ENST00000466032 CHRNDQ07001 517 aa7.3□□□□□ -1.24
CHMP3-206ENST00000466032 LRRC24Q50LG9 513 aa7.3□□□□□ -1.24
CHMP3-206ENST00000466032 GPAT2Q6NUI2 795 aa7.3□□□□□ -1.24
CHMP3-206ENST00000466032 C15orf52Q6ZUT6 534 aaKnown RBP7.3□□□□□ -1.24
CHMP3-206ENST00000466032 SMIM5Q71RC9 77 aa7.3□□□□□ -1.24
CHMP3-206ENST00000466032 VGLL2Q8N8G2 317 aa7.3□□□□□ -1.24
CHMP3-206ENST00000466032 SUPT20HQ8NEM7 779 aa7.3□□□□□ -1.24
CHMP3-206ENST00000466032 KLHDC4Q8TBB5 520 aa7.3□□□□□ -1.24
CHMP3-206ENST00000466032 RUFY2Q8WXA3 655 aa7.3□□□□□ -1.24
CHMP3-206ENST00000466032 EAF2Q96CJ1 260 aaPredicted RBP7.3□□□□□ -1.24
CHMP3-206ENST00000466032 EVI5LQ96CN4 794 aa7.3□□□□□ -1.24
CHMP3-206ENST00000466032 ZNF594Q96JF6 807 aaPredicted RBP7.3□□□□□ -1.24
CHMP3-206ENST00000466032 NEUROD6Q96NK8 337 aa7.3□□□□□ -1.24
CHMP3-206ENST00000466032 SEC31BQ9NQW1 1179 aa7.3□□□□□ -1.24
CHMP3-206ENST00000466032 CD2APQ9Y5K6 639 aa7.3□□□□□ -1.24
CHMP3-206ENST00000466032 RFX7Q2KHR2 1363 aa7.3□□□□□ -1.24
CHMP3-206ENST00000466032 PDS5AQ29RF7 1337 aaKnown RBP7.29□□□□□ -1.24
CHMP3-206ENST00000466032 ZNF609O15014 1411 aa7.29□□□□□ -1.24
CHMP3-206ENST00000466032 C10orf71Q711Q0 1435 aa7.29□□□□□ -1.24
CHMP3-206ENST00000466032 SMARCA5O60264 1052 aaPredicted RBP7.29□□□□□ -1.24
CHMP3-206ENST00000466032 CDC45O75419 566 aa7.29□□□□□ -1.24
CHMP3-206ENST00000466032 ZFYP08048 801 aaPredicted RBP7.29□□□□□ -1.24
CHMP3-206ENST00000466032 TTC39AQ5SRH9 613 aa7.29□□□□□ -1.24
CHMP3-206ENST00000466032 ZSCAN25Q6NSZ9 544 aa7.29□□□□□ -1.24
CHMP3-206ENST00000466032 VPS37DQ86XT2 251 aa7.29□□□□□ -1.24
CHMP3-206ENST00000466032 C2CD5Q86YS7 1000 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms