RNA–Protein interactions for RNA: ENST00000465903.5

SMC4-206, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-206ENST00000465903 ZNF408Q9H9D4 720 aa31.89■■■□□ 2.7
SMC4-206ENST00000465903 PDS5AQ29RF7 1337 aaKnown RBP31.89■■■□□ 2.7
SMC4-206ENST00000465903 CDCA5Q96FF9 252 aa31.88■■■□□ 2.69
SMC4-206ENST00000465903 CCDC8Q9H0W5 538 aaPredicted RBP31.88■■■□□ 2.69
SMC4-206ENST00000465903 HMG20BQ9P0W2 317 aa31.88■■■□□ 2.69
SMC4-206ENST00000465903 DBNLQ9UJU6 430 aaKnown RBP31.88■■■□□ 2.69
SMC4-206ENST00000465903 PRDX5P30044 214 aa31.87■■■□□ 2.69
SMC4-206ENST00000465903 TLR7Q9NYK1 1049 aaKnown RBP31.87■■■□□ 2.69
SMC4-206ENST00000465903 MYH2Q9UKX2 1941 aa31.87■■■□□ 2.69
SMC4-206ENST00000465903 MKRN1Q9UHC7 482 aaKnown RBP31.86■■■□□ 2.69
SMC4-206ENST00000465903 TLL2Q9Y6L7 1015 aa31.86■■■□□ 2.69
SMC4-206ENST00000465903 CLRN2A0PK11 232 aa31.85■■■□□ 2.69
SMC4-206ENST00000465903 MCAMP43121 646 aa31.85■■■□□ 2.69
SMC4-206ENST00000465903 PRAMEF18Q5VWM3 479 aa31.85■■■□□ 2.69
SMC4-206ENST00000465903 PI16Q6UXB8 463 aa31.85■■■□□ 2.69
SMC4-206ENST00000465903 APOBEC3FQ8IUX4 373 aaKnown RBP31.85■■■□□ 2.69
SMC4-206ENST00000465903 IL1RAPL2Q9NP60 686 aa31.85■■■□□ 2.69
SMC4-206ENST00000465903 PCDHB15Q9Y5E8 787 aa31.85■■■□□ 2.69
SMC4-206ENST00000465903 CNTNAP1P78357 1384 aa31.84■■■□□ 2.69
SMC4-206ENST00000465903 MAST3O60307 1309 aa31.84■■■□□ 2.69
SMC4-206ENST00000465903 RASSF10A6NK89 507 aa31.84■■■□□ 2.69
SMC4-206ENST00000465903 UQCRFS1P1P0C7P4 283 aa31.84■■■□□ 2.69
SMC4-206ENST00000465903 SPATA5Q8NB90 893 aa31.84■■■□□ 2.69
SMC4-206ENST00000465903 TEKT1Q969V4 418 aa31.84■■■□□ 2.69
SMC4-206ENST00000465903 KIF1BPQ96EK5 621 aa31.84■■■□□ 2.69
SMC4-206ENST00000465903 TDRD3Q9H7E2 651 aaKnown RBP31.84■■■□□ 2.69
SMC4-206ENST00000465903 ZNF70Q9UC06 446 aaPredicted RBP31.84■■■□□ 2.69
SMC4-206ENST00000465903 ABT1Q9ULW3 272 aaKnown RBP31.84■■■□□ 2.69
SMC4-206ENST00000465903 MYO5AQ9Y4I1 1855 aaKnown RBP31.84■■■□□ 2.69
SMC4-206ENST00000465903 APBB1O00213 710 aa31.83■■■□□ 2.69
SMC4-206ENST00000465903 MYO1BO43795 1136 aa31.83■■■□□ 2.69
SMC4-206ENST00000465903 RAB11FIP3O75154 756 aa31.83■■■□□ 2.69
SMC4-206ENST00000465903 LDHBP07195 334 aaKnown RBP31.83■■■□□ 2.69
SMC4-206ENST00000465903 SPDYE2Q495Y8 402 aa31.83■■■□□ 2.69
SMC4-206ENST00000465903 CCDC158Q5M9N0 1113 aa31.83■■■□□ 2.69
SMC4-206ENST00000465903 HHIPL2Q6UWX4 724 aa31.83■■■□□ 2.69
SMC4-206ENST00000465903 ZDHHC15Q96MV8 337 aa31.83■■■□□ 2.69
SMC4-206ENST00000465903 DEFB115Q30KQ5 88 aa31.82■■■□□ 2.68
SMC4-206ENST00000465903 TTC39AQ5SRH9 613 aa31.82■■■□□ 2.68
SMC4-206ENST00000465903 SAPCD2Q86UD0 394 aa31.82■■■□□ 2.68
SMC4-206ENST00000465903 ZGPATQ8N5A5 531 aaKnown RBP31.82■■■□□ 2.68
SMC4-206ENST00000465903 ZNF512BQ96KM6 892 aaPredicted RBP31.82■■■□□ 2.68
SMC4-206ENST00000465903 APOBEC3HQ6NTF7 200 aaKnown RBP31.81■■■□□ 2.68
SMC4-206ENST00000465903 AACSQ86V21 672 aa31.81■■■□□ 2.68
SMC4-206ENST00000465903 SUPT16HQ9Y5B9 1047 aaKnown RBP31.81■■■□□ 2.68
SMC4-206ENST00000465903 DIXDC1Q155Q3 683 aa31.8■■■□□ 2.68
SMC4-206ENST00000465903 DEFB129Q9H1M3 183 aa31.8■■■□□ 2.68
SMC4-206ENST00000465903 VEZTQ9HBM0 779 aa31.8■■■□□ 2.68
SMC4-206ENST00000465903 GBA2Q9HCG7 927 aaPredicted RBP31.8■■■□□ 2.68
SMC4-206ENST00000465903 ABCF2Q9UG63 623 aa31.8■■■□□ 2.68
SMC4-206ENST00000465903 TBC1D9Q6ZT07 1266 aa31.79■■■□□ 2.68
SMC4-206ENST00000465903 JMYQ8N9B5 988 aa31.79■■■□□ 2.68
SMC4-206ENST00000465903 DCTPP1Q9H773 170 aa31.79■■■□□ 2.68
SMC4-206ENST00000465903 VEGFBP49765 207 aa31.78■■■□□ 2.68
SMC4-206ENST00000465903 SNRKQ9NRH2 765 aa31.78■■■□□ 2.68
SMC4-206ENST00000465903 DAGLAQ9Y4D2 1042 aa31.78■■■□□ 2.68
SMC4-206ENST00000465903 SPTY2D1Q68D10 685 aaPredicted RBP31.77■■■□□ 2.68
SMC4-206ENST00000465903 CLASRPQ8N2M8 674 aaKnown RBP31.77■■■□□ 2.68
SMC4-206ENST00000465903 C2orf69Q8N8R5 385 aa31.77■■■□□ 2.68
SMC4-206ENST00000465903 ERICH6Q7L0X2 663 aa31.76■■■□□ 2.67
SMC4-206ENST00000465903 ZNF384Q8TF68 577 aa31.75■■■□□ 2.67
SMC4-206ENST00000465903 HHIPL1Q96JK4 782 aa31.75■■■□□ 2.67
SMC4-206ENST00000465903 PAPPA2Q9BXP8 1791 aa31.74■■■□□ 2.67
SMC4-206ENST00000465903 RASA3Q14644 834 aa31.74■■■□□ 2.67
SMC4-206ENST00000465903 PPP2R3BQ9Y5P8 575 aa31.74■■■□□ 2.67
SMC4-206ENST00000465903 CYP2E1P05181 493 aaPredicted RBP31.73■■■□□ 2.67
SMC4-206ENST00000465903 ZAP70P43403 619 aa31.73■■■□□ 2.67
SMC4-206ENST00000465903 HUNKP57058 714 aa31.73■■■□□ 2.67
SMC4-206ENST00000465903 CYP4F22Q6NT55 531 aa31.73■■■□□ 2.67
SMC4-206ENST00000465903 MOB2Q70IA6 237 aa31.73■■■□□ 2.67
SMC4-206ENST00000465903 FAM163AQ96GL9 167 aaPredicted RBP31.73■■■□□ 2.67
SMC4-206ENST00000465903 GAKO14976 1311 aa31.73■■■□□ 2.67
SMC4-206ENST00000465903 TCP10L2B9ZVM9 353 aa31.72■■■□□ 2.67
SMC4-206ENST00000465903 SMARCA5O60264 1052 aaPredicted RBP31.72■■■□□ 2.67
SMC4-206ENST00000465903 CACNB3P54284 484 aa31.72■■■□□ 2.67
SMC4-206ENST00000465903 MECOMQ03112 1051 aa31.72■■■□□ 2.67
SMC4-206ENST00000465903 DZIP1Q86YF9 867 aaKnown RBP31.72■■■□□ 2.67
SMC4-206ENST00000465903 CDC42EP5Q6NZY7 148 aa31.71■■■□□ 2.67
SMC4-206ENST00000465903 NSUN4Q96CB9 384 aaKnown RBP31.71■■■□□ 2.67
SMC4-206ENST00000465903 LRRCC1Q9C099 1032 aa31.71■■■□□ 2.67
SMC4-206ENST00000465903 WDR33Q9C0J8 1336 aaKnown RBP31.71■■■□□ 2.67
SMC4-206ENST00000465903 SSC5DA1L4H1 1573 aa31.7■■■□□ 2.67
SMC4-206ENST00000465903 FKBP1BP68106 108 aa31.7■■■□□ 2.67
SMC4-206ENST00000465903 TNFAIP1Q13829 316 aa31.7■■■□□ 2.67
SMC4-206ENST00000465903 NBPF12Q5TAG4 269 aaPredicted RBP31.7■■■□□ 2.67
SMC4-206ENST00000465903 CAPNS2Q96L46 248 aa31.7■■■□□ 2.67
SMC4-206ENST00000465903 TEPSINQ96N21 525 aa31.7■■■□□ 2.67
SMC4-206ENST00000465903 BCL11AQ9H165 835 aa31.7■■■□□ 2.67
SMC4-206ENST00000465903 IFIT2P09913 472 aaKnown RBP31.69■■■□□ 2.66
SMC4-206ENST00000465903 NF2P35240 595 aa31.69■■■□□ 2.66
SMC4-206ENST00000465903 EXOC6Q8TAG9 804 aa31.69■■■□□ 2.66
SMC4-206ENST00000465903 FKBP1CQ5VVH2 108 aa31.68■■■□□ 2.66
SMC4-206ENST00000465903 PAXIP1Q6ZW49 1069 aaPredicted RBP31.68■■■□□ 2.66
SMC4-206ENST00000465903 CDAN1Q8IWY9 1227 aa31.68■■■□□ 2.66
SMC4-206ENST00000465903 PIH1D3Q9NQM4 214 aaKnown RBP31.68■■■□□ 2.66
SMC4-206ENST00000465903 RAI14Q9P0K7 980 aa31.68■■■□□ 2.66
SMC4-206ENST00000465903 LRP2BPQ9P2M1 347 aa31.68■■■□□ 2.66
SMC4-206ENST00000465903 NDUFB9Q9Y6M9 179 aa31.68■■■□□ 2.66
SMC4-206ENST00000465903 DOCK2Q92608 1830 aa31.68■■■□□ 2.66
SMC4-206ENST00000465903 MAST2Q6P0Q8 1798 aa31.67■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms