RNA–Protein interactions for RNA: ENST00000465507.1

XRN1-205, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 322 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-205ENST00000465507 PDE3AQ14432 1141 aa6.08□□□□□ -1.44
XRN1-205ENST00000465507 MAP4K3Q8IVH8 894 aa6.08□□□□□ -1.44
XRN1-205ENST00000465507 GIPC2Q8TF65 315 aa6.08□□□□□ -1.44
XRN1-205ENST00000465507 TP53INP1Q96A56 240 aa6.08□□□□□ -1.44
XRN1-205ENST00000465507 RUSC1Q9BVN2 902 aa6.08□□□□□ -1.44
XRN1-205ENST00000465507 CBX8Q9HC52 389 aa6.08□□□□□ -1.44
XRN1-205ENST00000465507 PARP2Q9UGN5 583 aa6.08□□□□□ -1.44
XRN1-205ENST00000465507 TTF2Q9UNY4 1162 aaKnown RBP6.08□□□□□ -1.44
XRN1-205ENST00000465507 EIF4BP23588 611 aaKnown RBP6.07□□□□□ -1.44
XRN1-205ENST00000465507 MAOBP27338 520 aa6.07□□□□□ -1.44
XRN1-205ENST00000465507 FAAP100Q0VG06 881 aa6.07□□□□□ -1.44
XRN1-205ENST00000465507 ARTNQ5T4W7 220 aa6.07□□□□□ -1.44
XRN1-205ENST00000465507 CORO1BQ9BR76 489 aa6.07□□□□□ -1.44
XRN1-205ENST00000465507 SSBP4Q9BWG4 385 aaPredicted RBP6.07□□□□□ -1.44
XRN1-205ENST00000465507 MRS2Q9HD23 443 aa6.07□□□□□ -1.44
XRN1-205ENST00000465507 ZFP64Q9NPA5 681 aa6.07□□□□□ -1.44
XRN1-205ENST00000465507 OSGEPQ9NPF4 335 aa6.07□□□□□ -1.44
XRN1-205ENST00000465507 F8W735 103 aaPredicted RBP6.06□□□□□ -1.44
XRN1-205ENST00000465507 SART1O43290 800 aaKnown RBP6.06□□□□□ -1.44
XRN1-205ENST00000465507 PRPF40AO75400 957 aaKnown RBP6.06□□□□□ -1.44
XRN1-205ENST00000465507 POU4F3Q15319 338 aa6.06□□□□□ -1.44
XRN1-205ENST00000465507 FDX2Q6P4F2 183 aa6.06□□□□□ -1.44
XRN1-205ENST00000465507 FBF1Q8TES7 1133 aa6.06□□□□□ -1.44
XRN1-205ENST00000465507 MEGF10Q96KG7 1140 aa6.06□□□□□ -1.44
XRN1-205ENST00000465507 C12orf49Q9H741 205 aa6.06□□□□□ -1.44
XRN1-205ENST00000465507 SRA1Q9HD15 236 aaKnown RBP6.06□□□□□ -1.44
XRN1-205ENST00000465507 RAD18Q9NS91 495 aa6.06□□□□□ -1.44
XRN1-205ENST00000465507 VTI1BQ9UEU0 232 aa6.06□□□□□ -1.44
XRN1-205ENST00000465507 CTSBP07858 339 aa6.05□□□□□ -1.44
XRN1-205ENST00000465507 ITPKAP23677 461 aa6.05□□□□□ -1.44
XRN1-205ENST00000465507 GSTT1P30711 240 aa6.05□□□□□ -1.44
XRN1-205ENST00000465507 MAP3K11Q16584 847 aa6.05□□□□□ -1.44
XRN1-205ENST00000465507 PRPF40BQ6NWY9 871 aaKnown RBP6.05□□□□□ -1.44
XRN1-205ENST00000465507 KIAA1211Q6ZU35 1233 aa6.05□□□□□ -1.44
XRN1-205ENST00000465507 C12orf50Q8NA57 414 aaPredicted RBP6.05□□□□□ -1.44
XRN1-205ENST00000465507 DDX54Q8TDD1 881 aaKnown RBP6.05□□□□□ -1.44
XRN1-205ENST00000465507 DCAF11Q8TEB1 546 aa6.05□□□□□ -1.44
XRN1-205ENST00000465507 KCNB2Q92953 911 aa6.05□□□□□ -1.44
XRN1-205ENST00000465507 LOC100289279A0A1B0GTE1 492 aa6.04□□□□□ -1.44
XRN1-205ENST00000465507 F6X3S4 739 aa6.04□□□□□ -1.44
XRN1-205ENST00000465507 GAS2O43903 313 aaKnown RBP6.04□□□□□ -1.44
XRN1-205ENST00000465507 DLGAP3O95886 979 aa6.04□□□□□ -1.44
XRN1-205ENST00000465507 RXRBP28702 533 aa6.04□□□□□ -1.44
XRN1-205ENST00000465507 GNA15P30679 374 aa6.04□□□□□ -1.44
XRN1-205ENST00000465507 AKAP4Q5JQC9 854 aa6.04□□□□□ -1.44
XRN1-205ENST00000465507 NUTM2GQ5VZR2 741 aa6.04□□□□□ -1.44
XRN1-205ENST00000465507 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.04□□□□□ -1.44
XRN1-205ENST00000465507 WNT8BQ93098 351 aa6.04□□□□□ -1.44
XRN1-205ENST00000465507 KCNF1Q9H3M0 494 aa6.04□□□□□ -1.44
XRN1-205ENST00000465507 AP4E1Q9UPM8 1137 aa6.04□□□□□ -1.44
XRN1-205ENST00000465507 B3GALT4O96024 378 aa6.03□□□□□ -1.44
XRN1-205ENST00000465507 CYP11A1P05108 521 aa6.03□□□□□ -1.44
XRN1-205ENST00000465507 DRD2P14416 443 aa6.03□□□□□ -1.44
XRN1-205ENST00000465507 LIG1P18858 919 aa6.03□□□□□ -1.44
XRN1-205ENST00000465507 PPP2R3AQ06190 1150 aa6.03□□□□□ -1.44
XRN1-205ENST00000465507 LRP8Q14114 963 aa6.03□□□□□ -1.44
XRN1-205ENST00000465507 MEI1Q5TIA1 1274 aa6.03□□□□□ -1.44
XRN1-205ENST00000465507 TRIM56Q9BRZ2 755 aaKnown RBP6.03□□□□□ -1.44
XRN1-205ENST00000465507 RNF208Q9H0X6 261 aa6.03□□□□□ -1.44
XRN1-205ENST00000465507 LGR6Q9HBX8 967 aa6.03□□□□□ -1.44
XRN1-205ENST00000465507 TMEM39AQ9NV64 488 aa6.03□□□□□ -1.44
XRN1-205ENST00000465507 FAM8A1Q9UBU6 413 aa6.03□□□□□ -1.44
XRN1-205ENST00000465507 CELA3AP09093 270 aa6.02□□□□□ -1.45
XRN1-205ENST00000465507 MAP1SQ66K74 1059 aaPredicted RBP6.02□□□□□ -1.45
XRN1-205ENST00000465507 DYMQ7RTS9 669 aa6.02□□□□□ -1.45
XRN1-205ENST00000465507 FBXO33Q7Z6M2 555 aa6.02□□□□□ -1.45
XRN1-205ENST00000465507 SULF2Q8IWU5 870 aa6.02□□□□□ -1.45
XRN1-205ENST00000465507 STK35Q8TDR2 534 aa6.02□□□□□ -1.45
XRN1-205ENST00000465507 UTP4Q969X6 686 aaKnown RBP6.02□□□□□ -1.45
XRN1-205ENST00000465507 ACSBG1Q96GR2 724 aa6.02□□□□□ -1.45
XRN1-205ENST00000465507 TM4SF5O14894 197 aa6.01□□□□□ -1.45
XRN1-205ENST00000465507 PAGE1O75459 146 aa6.01□□□□□ -1.45
XRN1-205ENST00000465507 RAB6AP20340 208 aa6.01□□□□□ -1.45
XRN1-205ENST00000465507 PREPP48147 710 aa6.01□□□□□ -1.45
XRN1-205ENST00000465507 ZNF326Q5BKZ1 582 aaKnown RBP6.01□□□□□ -1.45
XRN1-205ENST00000465507 MPRIPQ6WCQ1 1025 aa6.01□□□□□ -1.45
XRN1-205ENST00000465507 NBPF11Q86T75 865 aa6.01□□□□□ -1.45
XRN1-205ENST00000465507 C3orf58Q8NDZ4 430 aa6.01□□□□□ -1.45
XRN1-205ENST00000465507 UBL7Q96S82 380 aaPredicted RBP6.01□□□□□ -1.45
XRN1-205ENST00000465507 CEP41Q9BYV8 373 aa6.01□□□□□ -1.45
XRN1-205ENST00000465507 CYP4F12Q9HCS2 524 aa6.01□□□□□ -1.45
XRN1-205ENST00000465507 CSADQ9Y600 493 aa6.01□□□□□ -1.45
XRN1-205ENST00000465507 AK5Q9Y6K8 562 aa6.01□□□□□ -1.45
XRN1-205ENST00000465507 SORBS3O60504 671 aa6□□□□□ -1.45
XRN1-205ENST00000465507 XRCC5P13010 732 aaKnown RBP6□□□□□ -1.45
XRN1-205ENST00000465507 LMNB1P20700 586 aa6□□□□□ -1.45
XRN1-205ENST00000465507 DAB2P98082 770 aa6□□□□□ -1.45
XRN1-205ENST00000465507 FGD1P98174 961 aa6□□□□□ -1.45
XRN1-205ENST00000465507 PTPN12Q05209 780 aaKnown RBP6□□□□□ -1.45
XRN1-205ENST00000465507 CCDC85BQ15834 202 aaPredicted RBP6□□□□□ -1.45
XRN1-205ENST00000465507 GRIN3AQ8TCU5 1115 aa6□□□□□ -1.45
XRN1-205ENST00000465507 WDR89Q96FK6 387 aaPredicted RBP6□□□□□ -1.45
XRN1-205ENST00000465507 SRCIN1Q9C0H9 1055 aa6□□□□□ -1.45
XRN1-205ENST00000465507 CCDC86Q9H6F5 360 aaKnown RBP6□□□□□ -1.45
XRN1-205ENST00000465507 SOX17Q9H6I2 414 aaPredicted RBP6□□□□□ -1.45
XRN1-205ENST00000465507 PODXL2Q9NZ53 605 aa6□□□□□ -1.45
XRN1-205ENST00000465507 GIPC1O14908 333 aa5.99□□□□□ -1.45
XRN1-205ENST00000465507 HYAL3O43820 417 aaPredicted RBP5.99□□□□□ -1.45
XRN1-205ENST00000465507 GSTP1P09211 210 aaKnown RBP5.99□□□□□ -1.45
XRN1-205ENST00000465507 BMP3P12645 472 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms