RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 DCPSQ96C86 337 aaKnown RBP14.32□□□□□ -0.12
CUX1-207ENST00000465461 ABCF2Q9UG63 623 aa14.32□□□□□ -0.12
CUX1-207ENST00000465461 NDUFB9Q9Y6M9 179 aa14.32□□□□□ -0.12
CUX1-207ENST00000465461 CLRN2A0PK11 232 aa14.31□□□□□ -0.12
CUX1-207ENST00000465461 PRAMEF18Q5VWM3 479 aa14.31□□□□□ -0.12
CUX1-207ENST00000465461 CDC37L1Q7L3B6 337 aa14.31□□□□□ -0.12
CUX1-207ENST00000465461 KRT26Q7Z3Y9 468 aa14.31□□□□□ -0.12
CUX1-207ENST00000465461 ZBED3Q96IU2 234 aaPredicted RBP14.31□□□□□ -0.12
CUX1-207ENST00000465461 LRRCC1Q9C099 1032 aa14.31□□□□□ -0.12
CUX1-207ENST00000465461 ZNF408Q9H9D4 720 aa14.31□□□□□ -0.12
CUX1-207ENST00000465461 IFIT2P09913 472 aaKnown RBP14.3□□□□□ -0.12
CUX1-207ENST00000465461 UQCRFS1P1P0C7P4 283 aa14.3□□□□□ -0.12
CUX1-207ENST00000465461 ZAP70P43403 619 aa14.3□□□□□ -0.12
CUX1-207ENST00000465461 APLP1P51693 650 aa14.3□□□□□ -0.12
CUX1-207ENST00000465461 DIXDC1Q155Q3 683 aa14.3□□□□□ -0.12
CUX1-207ENST00000465461 TDRD3Q9H7E2 651 aaKnown RBP14.3□□□□□ -0.12
CUX1-207ENST00000465461 SPDYE2BA6NHP3 402 aa14.29□□□□□ -0.12
CUX1-207ENST00000465461 IGHDP01880 384 aa14.29□□□□□ -0.12
CUX1-207ENST00000465461 LDHBP07195 334 aaKnown RBP14.29□□□□□ -0.12
CUX1-207ENST00000465461 SPDYE6P0CI01 402 aa14.29□□□□□ -0.12
CUX1-207ENST00000465461 CST9Q5W186 159 aa14.29□□□□□ -0.12
CUX1-207ENST00000465461 MTMR14Q8NCE2 650 aa14.29□□□□□ -0.12
CUX1-207ENST00000465461 SERPINA10Q9UK55 444 aa14.29□□□□□ -0.12
CUX1-207ENST00000465461 SALL1Q9NSC2 1324 aa14.29□□□□□ -0.12
CUX1-207ENST00000465461 CYP2E1P05181 493 aaPredicted RBP14.28□□□□□ -0.12
CUX1-207ENST00000465461 CACNB3P54284 484 aa14.28□□□□□ -0.12
CUX1-207ENST00000465461 SULF1Q8IWU6 871 aa14.28□□□□□ -0.12
CUX1-207ENST00000465461 TEKT1Q969V4 418 aa14.28□□□□□ -0.12
CUX1-207ENST00000465461 ANTXR1Q9H6X2 564 aa14.28□□□□□ -0.12
CUX1-207ENST00000465461 VEZTQ9HBM0 779 aa14.28□□□□□ -0.12
CUX1-207ENST00000465461 PIH1D3Q9NQM4 214 aaKnown RBP14.28□□□□□ -0.12
CUX1-207ENST00000465461 ZNF70Q9UC06 446 aaPredicted RBP14.28□□□□□ -0.12
CUX1-207ENST00000465461 AKAP11Q9UKA4 1901 aa14.27□□□□□ -0.12
CUX1-207ENST00000465461 CELF2O95319 508 aaKnown RBP14.27□□□□□ -0.13
CUX1-207ENST00000465461 MMP14P50281 582 aa14.27□□□□□ -0.13
CUX1-207ENST00000465461 HDAC1Q13547 482 aaPredicted RBP14.27□□□□□ -0.13
CUX1-207ENST00000465461 TSHZ3Q63HK5 1081 aa14.27□□□□□ -0.13
CUX1-207ENST00000465461 APOBEC3HQ6NTF7 200 aaKnown RBP14.27□□□□□ -0.13
CUX1-207ENST00000465461 ERICH6Q7L0X2 663 aa14.27□□□□□ -0.13
CUX1-207ENST00000465461 ZNF384Q8TF68 577 aa14.27□□□□□ -0.13
CUX1-207ENST00000465461 CDCA5Q96FF9 252 aa14.27□□□□□ -0.13
CUX1-207ENST00000465461 ZNF512BQ96KM6 892 aaPredicted RBP14.27□□□□□ -0.13
CUX1-207ENST00000465461 RAI14Q9P0K7 980 aa14.27□□□□□ -0.13
CUX1-207ENST00000465461 SUGT1Q9Y2Z0 365 aa14.27□□□□□ -0.13
CUX1-207ENST00000465461 PDS5AQ29RF7 1337 aaKnown RBP14.26□□□□□ -0.13
CUX1-207ENST00000465461 TMEM88BA6NKF7 163 aa14.26□□□□□ -0.13
CUX1-207ENST00000465461 TCP10L2B9ZVM9 353 aa14.26□□□□□ -0.13
CUX1-207ENST00000465461 ZBTB22O15209 634 aa14.26□□□□□ -0.13
CUX1-207ENST00000465461 MYO1BO43795 1136 aa14.26□□□□□ -0.13
CUX1-207ENST00000465461 HDLBPQ00341 1268 aaKnown RBP14.26□□□□□ -0.13
CUX1-207ENST00000465461 MECOMQ03112 1051 aa14.26□□□□□ -0.13
CUX1-207ENST00000465461 ANKRD45Q5TZF3 282 aa14.26□□□□□ -0.13
CUX1-207ENST00000465461 DZIP1Q86YF9 867 aaKnown RBP14.26□□□□□ -0.13
CUX1-207ENST00000465461 ZGPATQ8N5A5 531 aaKnown RBP14.26□□□□□ -0.13
CUX1-207ENST00000465461 OTUD7AQ8TE49 926 aaPredicted RBP14.26□□□□□ -0.13
CUX1-207ENST00000465461 EDC3Q96F86 508 aaKnown RBP14.26□□□□□ -0.13
CUX1-207ENST00000465461 ZDHHC15Q96MV8 337 aa14.26□□□□□ -0.13
CUX1-207ENST00000465461 BOLA2Q9H3K6 86 aa14.26□□□□□ -0.13
CUX1-207ENST00000465461 LRP2BPQ9P2M1 347 aa14.26□□□□□ -0.13
CUX1-207ENST00000465461 DAGLAQ9Y4D2 1042 aa14.26□□□□□ -0.13
CUX1-207ENST00000465461 MAST3O60307 1309 aa14.25□□□□□ -0.13
CUX1-207ENST00000465461 PITPNM2Q9BZ72 1349 aa14.25□□□□□ -0.13
CUX1-207ENST00000465461 SPDYE2Q495Y8 402 aa14.25□□□□□ -0.13
CUX1-207ENST00000465461 B4GALNT3Q6L9W6 998 aa14.25□□□□□ -0.13
CUX1-207ENST00000465461 HHIPL2Q6UWX4 724 aa14.25□□□□□ -0.13
CUX1-207ENST00000465461 DNAJC2Q99543 621 aaKnown RBP14.25□□□□□ -0.13
CUX1-207ENST00000465461 MRIQ9BWK5 157 aa14.25□□□□□ -0.13
CUX1-207ENST00000465461 FZD1Q9UP38 647 aa14.25□□□□□ -0.13
CUX1-207ENST00000465461 MYO5AQ9Y4I1 1855 aaKnown RBP14.25□□□□□ -0.13
CUX1-207ENST00000465461 AAMPQ13685 434 aa14.24□□□□□ -0.13
CUX1-207ENST00000465461 SPTY2D1Q68D10 685 aaPredicted RBP14.24□□□□□ -0.13
CUX1-207ENST00000465461 CDC42EP5Q6NZY7 148 aa14.24□□□□□ -0.13
CUX1-207ENST00000465461 MOB2Q70IA6 237 aa14.24□□□□□ -0.13
CUX1-207ENST00000465461 APOBEC3FQ8IUX4 373 aaKnown RBP14.24□□□□□ -0.13
CUX1-207ENST00000465461 NSUN4Q96CB9 384 aaKnown RBP14.24□□□□□ -0.13
CUX1-207ENST00000465461 DEFB129Q9H1M3 183 aa14.24□□□□□ -0.13
CUX1-207ENST00000465461 RWDD1Q9H446 243 aaPredicted RBP14.24□□□□□ -0.13
CUX1-207ENST00000465461 CREBZFQ9NS37 354 aa14.24□□□□□ -0.13
CUX1-207ENST00000465461 MKRN1Q9UHC7 482 aaKnown RBP14.24□□□□□ -0.13
CUX1-207ENST00000465461 ABT1Q9ULW3 272 aaKnown RBP14.24□□□□□ -0.13
CUX1-207ENST00000465461 ECM29Q5VYK3 1845 aa14.24□□□□□ -0.13
CUX1-207ENST00000465461 MYH2Q9UKX2 1941 aa14.23□□□□□ -0.13
CUX1-207ENST00000465461 TRPM7Q96QT4 1865 aa14.23□□□□□ -0.13
CUX1-207ENST00000465461 PRKG1Q13976 671 aa14.23□□□□□ -0.13
CUX1-207ENST00000465461 RASA3Q14644 834 aa14.23□□□□□ -0.13
CUX1-207ENST00000465461 CDAN1Q8IWY9 1227 aa14.23□□□□□ -0.13
CUX1-207ENST00000465461 GCC1Q96CN9 775 aa14.23□□□□□ -0.13
CUX1-207ENST00000465461 USP40Q9NVE5 1235 aa14.23□□□□□ -0.13
CUX1-207ENST00000465461 GOLIM4O00461 696 aa14.22□□□□□ -0.13
CUX1-207ENST00000465461 IDH1O75874 414 aaKnown RBP14.22□□□□□ -0.13
CUX1-207ENST00000465461 ATP5JP18859 108 aa14.22□□□□□ -0.13
CUX1-207ENST00000465461 BTDP43251 543 aa14.22□□□□□ -0.13
CUX1-207ENST00000465461 ADGRA1Q86SQ6 560 aa14.22□□□□□ -0.13
CUX1-207ENST00000465461 DNAJC5GQ8N7S2 189 aa14.22□□□□□ -0.13
CUX1-207ENST00000465461 TMEM39BQ9GZU3 492 aa14.22□□□□□ -0.13
CUX1-207ENST00000465461 MROH7-TTC4A0A0A0MT08 1334 aa14.21□□□□□ -0.13
CUX1-207ENST00000465461 GAKO14976 1311 aa14.21□□□□□ -0.13
CUX1-207ENST00000465461 MAP4K4O95819 1239 aaPredicted RBP14.21□□□□□ -0.13
CUX1-207ENST00000465461 TCP10Q12799 353 aa14.21□□□□□ -0.13
CUX1-207ENST00000465461 NFIAQ12857 509 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms