RNA–Protein interactions for RNA: ENST00000465441.1

CSPG5-204, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 4

Gene CSPG5, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-204ENST00000465441 IREB2P48200 963 aaKnown RBP26.13■■□□□ 1.77
CSPG5-204ENST00000465441 INHBEP58166 350 aa26.13■■□□□ 1.77
CSPG5-204ENST00000465441 TNFAIP1Q13829 316 aa26.13■■□□□ 1.77
CSPG5-204ENST00000465441 TBC1D22AQ8WUA7 517 aa26.13■■□□□ 1.77
CSPG5-204ENST00000465441 TCP10L2B9ZVM9 353 aa26.12■■□□□ 1.77
CSPG5-204ENST00000465441 NOM1Q5C9Z4 860 aaKnown RBP26.12■■□□□ 1.77
CSPG5-204ENST00000465441 CFHR5Q9BXR6 569 aa26.12■■□□□ 1.77
CSPG5-204ENST00000465441 IFIT1P09914 478 aaKnown RBP26.11■■□□□ 1.77
CSPG5-204ENST00000465441 CT47B1P0C2W7 299 aaPredicted RBP26.11■■□□□ 1.77
CSPG5-204ENST00000465441 ZBTB48P10074 688 aaPredicted RBP26.11■■□□□ 1.77
CSPG5-204ENST00000465441 HDLBPQ00341 1268 aaKnown RBP26.11■■□□□ 1.77
CSPG5-204ENST00000465441 PUM3Q15397 648 aaKnown RBP26.11■■□□□ 1.77
CSPG5-204ENST00000465441 TEPSINQ96N21 525 aa26.11■■□□□ 1.77
CSPG5-204ENST00000465441 IFNL1Q8IU54 200 aa26.1■■□□□ 1.77
CSPG5-204ENST00000465441 CDAN1Q8IWY9 1227 aa26.1■■□□□ 1.77
CSPG5-204ENST00000465441 ANKRD13AQ8IZ07 590 aa26.1■■□□□ 1.77
CSPG5-204ENST00000465441 MRIQ9BWK5 157 aa26.1■■□□□ 1.77
CSPG5-204ENST00000465441 CCER2I3L3R5 266 aa26.09■■□□□ 1.77
CSPG5-204ENST00000465441 ALDH1A1P00352 501 aa26.09■■□□□ 1.77
CSPG5-204ENST00000465441 UBTFL1P0CB47 393 aaPredicted RBP26.09■■□□□ 1.77
CSPG5-204ENST00000465441 GJA5P36382 358 aa26.09■■□□□ 1.77
CSPG5-204ENST00000465441 PKN2Q16513 984 aaKnown RBP26.09■■□□□ 1.77
CSPG5-204ENST00000465441 ATG9AQ7Z3C6 839 aa26.09■■□□□ 1.77
CSPG5-204ENST00000465441 FKTNO75072 461 aa26.08■■□□□ 1.77
CSPG5-204ENST00000465441 TNNI2P48788 182 aa26.08■■□□□ 1.77
CSPG5-204ENST00000465441 LPIN2Q92539 896 aa26.08■■□□□ 1.77
CSPG5-204ENST00000465441 TEKT1Q969V4 418 aa26.08■■□□□ 1.77
CSPG5-204ENST00000465441 TMEM39BQ9GZU3 492 aa26.08■■□□□ 1.77
CSPG5-204ENST00000465441 KIF16BQ96L93 1317 aa26.08■■□□□ 1.77
CSPG5-204ENST00000465441 SLC5A1P13866 664 aa26.07■■□□□ 1.76
CSPG5-204ENST00000465441 API5Q9BZZ5 524 aaKnown RBP26.07■■□□□ 1.76
CSPG5-204ENST00000465441 HPS5Q9UPZ3 1129 aa26.07■■□□□ 1.76
CSPG5-204ENST00000465441 IGF2BP3O00425 579 aaKnown RBP eCLIP26.06■■□□□ 1.76
CSPG5-204ENST00000465441 SUGT1Q9Y2Z0 365 aa26.06■■□□□ 1.76
CSPG5-204ENST00000465441 CACNB3P54284 484 aa26.05■■□□□ 1.76
CSPG5-204ENST00000465441 SOX10P56693 466 aa26.05■■□□□ 1.76
CSPG5-204ENST00000465441 ZDHHC15Q96MV8 337 aa26.05■■□□□ 1.76
CSPG5-204ENST00000465441 SIL1Q9H173 461 aa26.05■■□□□ 1.76
CSPG5-204ENST00000465441 ELP3Q9H9T3 547 aa26.05■■□□□ 1.76
CSPG5-204ENST00000465441 FBXO3Q9UK99 471 aa26.05■■□□□ 1.76
CSPG5-204ENST00000465441 RARSP54136 660 aaKnown RBP26.04■■□□□ 1.76
CSPG5-204ENST00000465441 APOBEC3HQ6NTF7 200 aaKnown RBP26.04■■□□□ 1.76
CSPG5-204ENST00000465441 PPP1R3FQ6ZSY5 799 aaPredicted RBP26.04■■□□□ 1.76
CSPG5-204ENST00000465441 LRRFIP2Q9Y608 721 aaKnown RBP26.04■■□□□ 1.76
CSPG5-204ENST00000465441 ARAP2Q8WZ64 1704 aa26.03■■□□□ 1.76
CSPG5-204ENST00000465441 MAP3K9P80192 1104 aa26.03■■□□□ 1.76
CSPG5-204ENST00000465441 OPTNQ96CV9 577 aa26.03■■□□□ 1.76
CSPG5-204ENST00000465441 CEP126Q9P2H0 1117 aa26.03■■□□□ 1.76
CSPG5-204ENST00000465441 TESPA1A2RU30 521 aaPredicted RBP26.02■■□□□ 1.76
CSPG5-204ENST00000465441 CIAO1O76071 339 aa26.02■■□□□ 1.76
CSPG5-204ENST00000465441 HHIPL2Q6UWX4 724 aa26.02■■□□□ 1.76
CSPG5-204ENST00000465441 WDR66Q8TBY9 1149 aa26.02■■□□□ 1.76
CSPG5-204ENST00000465441 PTPN18Q99952 460 aa26.02■■□□□ 1.76
CSPG5-204ENST00000465441 HDAC5Q9UQL6 1122 aa26.02■■□□□ 1.76
CSPG5-204ENST00000465441 MAST3O60307 1309 aa26.01■■□□□ 1.75
CSPG5-204ENST00000465441 OTUD7BQ6GQQ9 843 aa26.01■■□□□ 1.75
CSPG5-204ENST00000465441 FBXO46Q6PJ61 603 aaPredicted RBP26.01■■□□□ 1.75
CSPG5-204ENST00000465441 MEIS3Q99687 375 aa26.01■■□□□ 1.75
CSPG5-204ENST00000465441 PA2G4Q9UQ80 394 aaKnown RBP26.01■■□□□ 1.75
CSPG5-204ENST00000465441 ATP2B3Q16720 1220 aa26■■□□□ 1.75
CSPG5-204ENST00000465441 FAM83AQ86UY5 434 aa26■■□□□ 1.75
CSPG5-204ENST00000465441 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26■■□□□ 1.75
CSPG5-204ENST00000465441 CNKSR2Q8WXI2 1034 aa26■■□□□ 1.75
CSPG5-204ENST00000465441 TMOD2Q9NZR1 351 aa26■■□□□ 1.75
CSPG5-204ENST00000465441 IL15P40933 162 aaPredicted RBP25.99■■□□□ 1.75
CSPG5-204ENST00000465441 FKBP1CQ5VVH2 108 aa25.99■■□□□ 1.75
CSPG5-204ENST00000465441 ARHGAP45Q92619 1136 aa25.99■■□□□ 1.75
CSPG5-204ENST00000465441 MS4A4AQ96JQ5 239 aa25.99■■□□□ 1.75
CSPG5-204ENST00000465441 VGLL4Q14135 290 aa25.98■■□□□ 1.75
CSPG5-204ENST00000465441 COPRSQ9NQ92 184 aa25.98■■□□□ 1.75
CSPG5-204ENST00000465441 CRHR2Q13324 411 aa25.97■■□□□ 1.75
CSPG5-204ENST00000465441 INTS3Q68E01 1043 aaKnown RBP25.97■■□□□ 1.75
CSPG5-204ENST00000465441 GNL3LQ9NVN8 582 aaKnown RBP25.97■■□□□ 1.75
CSPG5-204ENST00000465441 CSADQ9Y600 493 aa25.97■■□□□ 1.75
CSPG5-204ENST00000465441 TRIM17Q9Y577 477 aa25.96■■□□□ 1.75
CSPG5-204ENST00000465441 PRDX5P30044 214 aa25.95■■□□□ 1.74
CSPG5-204ENST00000465441 PHKA1P46020 1223 aa25.95■■□□□ 1.74
CSPG5-204ENST00000465441 TIMM10P62072 90 aa25.94■■□□□ 1.74
CSPG5-204ENST00000465441 DIXDC1Q155Q3 683 aa25.94■■□□□ 1.74
CSPG5-204ENST00000465441 BRI3BPQ8WY22 251 aa25.94■■□□□ 1.74
CSPG5-204ENST00000465441 DENND2AQ9ULE3 1009 aa25.94■■□□□ 1.74
CSPG5-204ENST00000465441 DAGLAQ9Y4D2 1042 aa25.94■■□□□ 1.74
CSPG5-204ENST00000465441 OTOFQ9HC10 1997 aa25.94■■□□□ 1.74
CSPG5-204ENST00000465441 LAMB1P07942 1786 aa25.94■■□□□ 1.74
CSPG5-204ENST00000465441 GNAI3P08754 354 aa25.93■■□□□ 1.74
CSPG5-204ENST00000465441 ADORA1P30542 326 aa25.93■■□□□ 1.74
CSPG5-204ENST00000465441 GTF2A2P52657 109 aa25.93■■□□□ 1.74
CSPG5-204ENST00000465441 CDC42EP5Q6NZY7 148 aa25.93■■□□□ 1.74
CSPG5-204ENST00000465441 OTOP1Q7RTM1 612 aa25.93■■□□□ 1.74
CSPG5-204ENST00000465441 FAM151AQ8WW52 585 aa25.93■■□□□ 1.74
CSPG5-204ENST00000465441 ZKSCAN4Q969J2 545 aaPredicted RBP25.93■■□□□ 1.74
CSPG5-204ENST00000465441 HOOK2Q96ED9 719 aa25.93■■□□□ 1.74
CSPG5-204ENST00000465441 OTUD5Q96G74 571 aa25.93■■□□□ 1.74
CSPG5-204ENST00000465441 CCL15-CCL14A0A0B4J2E2 113 aa25.92■■□□□ 1.74
CSPG5-204ENST00000465441 LDHBP07195 334 aaKnown RBP25.92■■□□□ 1.74
CSPG5-204ENST00000465441 CCL15Q16663 113 aa25.92■■□□□ 1.74
CSPG5-204ENST00000465441 MIGA2Q7L4E1 593 aa25.92■■□□□ 1.74
CSPG5-204ENST00000465441 CD99L2Q8TCZ2 262 aa25.92■■□□□ 1.74
CSPG5-204ENST00000465441 ERO1AQ96HE7 468 aa25.92■■□□□ 1.74
CSPG5-204ENST00000465441 WRNIP1Q96S55 665 aa25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms