RNA–Protein interactions for RNA: ENST00000465209.1

COL11A1-207, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 297 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-207ENST00000465209 POTEFA5A3E0 1075 aa13.85□□□□□ -0.19
COL11A1-207ENST00000465209 HIBADHP31937 336 aaKnown RBP13.85□□□□□ -0.19
COL11A1-207ENST00000465209 TAF7LQ5H9L4 462 aa13.85□□□□□ -0.19
COL11A1-207ENST00000465209 FBXO33Q7Z6M2 555 aa13.85□□□□□ -0.19
COL11A1-207ENST00000465209 DZIP1LQ8IYY4 767 aaKnown RBP13.85□□□□□ -0.19
COL11A1-207ENST00000465209 ANKRD44Q8N8A2 993 aa13.85□□□□□ -0.19
COL11A1-207ENST00000465209 CD99L2Q8TCZ2 262 aa13.85□□□□□ -0.19
COL11A1-207ENST00000465209 CNKSR2Q8WXI2 1034 aa13.85□□□□□ -0.19
COL11A1-207ENST00000465209 OPTNQ96CV9 577 aa13.85□□□□□ -0.19
COL11A1-207ENST00000465209 SRCIN1Q9C0H9 1055 aa13.85□□□□□ -0.19
COL11A1-207ENST00000465209 C9orf78Q9NZ63 289 aaPredicted RBP13.85□□□□□ -0.19
COL11A1-207ENST00000465209 PTPN22Q9Y2R2 807 aa13.85□□□□□ -0.19
COL11A1-207ENST00000465209 CRKP46108 304 aa13.84□□□□□ -0.19
COL11A1-207ENST00000465209 RBM5P52756 815 aaKnown RBP eCLIP13.84□□□□□ -0.19
COL11A1-207ENST00000465209 TNFAIP1Q13829 316 aa13.84□□□□□ -0.19
COL11A1-207ENST00000465209 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.84□□□□□ -0.19
COL11A1-207ENST00000465209 ARMC5Q96C12 935 aa13.84□□□□□ -0.19
COL11A1-207ENST00000465209 TMEM39BQ9GZU3 492 aa13.84□□□□□ -0.19
COL11A1-207ENST00000465209 BICC1Q9H694 974 aaKnown RBP13.84□□□□□ -0.19
COL11A1-207ENST00000465209 ELP3Q9H9T3 547 aa13.84□□□□□ -0.19
COL11A1-207ENST00000465209 VGLL4Q14135 290 aa13.83□□□□□ -0.2
COL11A1-207ENST00000465209 LRRC24Q50LG9 513 aa13.83□□□□□ -0.2
COL11A1-207ENST00000465209 SLC4A10Q6U841 1118 aa13.83□□□□□ -0.2
COL11A1-207ENST00000465209 BRI3BPQ8WY22 251 aa13.83□□□□□ -0.2
COL11A1-207ENST00000465209 ERO1AQ96HE7 468 aa13.83□□□□□ -0.2
COL11A1-207ENST00000465209 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.83□□□□□ -0.2
COL11A1-207ENST00000465209 MROH5Q6ZUA9 1318 aa13.83□□□□□ -0.2
COL11A1-207ENST00000465209 SZT2Q5T011 3432 aa13.83□□□□□ -0.2
COL11A1-207ENST00000465209 TCP10L2B9ZVM9 353 aa13.82□□□□□ -0.2
COL11A1-207ENST00000465209 INTS3Q68E01 1043 aaKnown RBP13.82□□□□□ -0.2
COL11A1-207ENST00000465209 HDLBPQ00341 1268 aaKnown RBP13.81□□□□□ -0.2
COL11A1-207ENST00000465209 SP3Q02447 781 aa13.81□□□□□ -0.2
COL11A1-207ENST00000465209 OTUD7BQ6GQQ9 843 aa13.81□□□□□ -0.2
COL11A1-207ENST00000465209 IQSEC3Q9UPP2 1182 aaPredicted RBP13.81□□□□□ -0.2
COL11A1-207ENST00000465209 SNCAIPQ9Y6H5 919 aa13.81□□□□□ -0.2
COL11A1-207ENST00000465209 KIF16BQ96L93 1317 aa13.81□□□□□ -0.2
COL11A1-207ENST00000465209 RPAP1Q9BWH6 1393 aaPredicted RBP13.81□□□□□ -0.2
COL11A1-207ENST00000465209 SPDYE5A6NIY4 337 aa13.8□□□□□ -0.2
COL11A1-207ENST00000465209 PDE8BO95263 885 aa13.8□□□□□ -0.2
COL11A1-207ENST00000465209 FGFR2P21802 821 aa13.8□□□□□ -0.2
COL11A1-207ENST00000465209 CACNB3P54284 484 aa13.8□□□□□ -0.2
COL11A1-207ENST00000465209 FAM43AQ8N2R8 423 aa13.8□□□□□ -0.2
COL11A1-207ENST00000465209 MRPL50Q8N5N7 158 aaKnown RBP13.8□□□□□ -0.2
COL11A1-207ENST00000465209 KLHDC4Q8TBB5 520 aa13.8□□□□□ -0.2
COL11A1-207ENST00000465209 EFCC1Q9HA90 598 aa13.8□□□□□ -0.2
COL11A1-207ENST00000465209 ANP32CO43423 234 aa13.79□□□□□ -0.2
COL11A1-207ENST00000465209 MAP3K9P80192 1104 aa13.79□□□□□ -0.2
COL11A1-207ENST00000465209 APOBEC3HQ6NTF7 200 aaKnown RBP13.79□□□□□ -0.2
COL11A1-207ENST00000465209 TBC1D22AQ8WUA7 517 aa13.79□□□□□ -0.2
COL11A1-207ENST00000465209 ZNF333Q96JL9 665 aa13.79□□□□□ -0.2
COL11A1-207ENST00000465209 ZDHHC15Q96MV8 337 aa13.79□□□□□ -0.2
COL11A1-207ENST00000465209 MRIQ9BWK5 157 aa13.79□□□□□ -0.2
COL11A1-207ENST00000465209 RANBP2P49792 3224 aaKnown RBP13.79□□□□□ -0.2
COL11A1-207ENST00000465209 CCL15-CCL14A0A0B4J2E2 113 aa13.78□□□□□ -0.2
COL11A1-207ENST00000465209 RFX5P48382 616 aaPredicted RBP13.78□□□□□ -0.2
COL11A1-207ENST00000465209 TNNI2P48788 182 aa13.78□□□□□ -0.2
COL11A1-207ENST00000465209 BCAMP50895 628 aa13.78□□□□□ -0.2
COL11A1-207ENST00000465209 GTF2A2P52657 109 aa13.78□□□□□ -0.2
COL11A1-207ENST00000465209 CHAF1AQ13111 956 aaPredicted RBP13.78□□□□□ -0.2
COL11A1-207ENST00000465209 CCL15Q16663 113 aa13.78□□□□□ -0.2
COL11A1-207ENST00000465209 METTL24Q5JXM2 366 aa13.78□□□□□ -0.2
COL11A1-207ENST00000465209 FKBP1CQ5VVH2 108 aa13.78□□□□□ -0.2
COL11A1-207ENST00000465209 FAM83AQ86UY5 434 aa13.78□□□□□ -0.2
COL11A1-207ENST00000465209 TEKT1Q969V4 418 aa13.78□□□□□ -0.2
COL11A1-207ENST00000465209 OTUD5Q96G74 571 aa13.78□□□□□ -0.2
COL11A1-207ENST00000465209 USP44Q9H0E7 712 aa13.78□□□□□ -0.2
COL11A1-207ENST00000465209 PTPRCP08575 1304 aa13.77□□□□□ -0.21
COL11A1-207ENST00000465209 EN2P19622 333 aaPredicted RBP13.77□□□□□ -0.21
COL11A1-207ENST00000465209 TAF1CQ15572 869 aaPredicted RBP13.77□□□□□ -0.21
COL11A1-207ENST00000465209 DOCK2Q92608 1830 aa13.77□□□□□ -0.21
COL11A1-207ENST00000465209 SUGT1Q9Y2Z0 365 aa13.77□□□□□ -0.21
COL11A1-207ENST00000465209 PTCH2Q9Y6C5 1203 aa13.77□□□□□ -0.21
COL11A1-207ENST00000465209 PTPRFP10586 1907 aa13.76□□□□□ -0.21
COL11A1-207ENST00000465209 BTBD19C9JJ37 291 aa13.76□□□□□ -0.21
COL11A1-207ENST00000465209 IRF6O14896 467 aa13.76□□□□□ -0.21
COL11A1-207ENST00000465209 CAVIN4Q5BKX8 364 aa13.76□□□□□ -0.21
COL11A1-207ENST00000465209 VPS37DQ86XT2 251 aa13.76□□□□□ -0.21
COL11A1-207ENST00000465209 FAM9BQ8IZU0 186 aa13.76□□□□□ -0.21
COL11A1-207ENST00000465209 ZKSCAN4Q969J2 545 aaPredicted RBP13.76□□□□□ -0.21
COL11A1-207ENST00000465209 WRNIP1Q96S55 665 aa13.76□□□□□ -0.21
COL11A1-207ENST00000465209 ARHGAP39Q9C0H5 1083 aa13.76□□□□□ -0.21
COL11A1-207ENST00000465209 ZFYVE28Q9HCC9 887 aa13.76□□□□□ -0.21
COL11A1-207ENST00000465209 ZCCHC17Q9NP64 241 aaKnown RBP13.76□□□□□ -0.21
COL11A1-207ENST00000465209 CSADQ9Y600 493 aa13.76□□□□□ -0.21
COL11A1-207ENST00000465209 MAST3O60307 1309 aa13.75□□□□□ -0.21
COL11A1-207ENST00000465209 ADGRA2Q96PE1 1338 aa13.75□□□□□ -0.21
COL11A1-207ENST00000465209 TLR2O60603 784 aa13.75□□□□□ -0.21
COL11A1-207ENST00000465209 PUM3Q15397 648 aaKnown RBP13.75□□□□□ -0.21
COL11A1-207ENST00000465209 HHIPL2Q6UWX4 724 aa13.75□□□□□ -0.21
COL11A1-207ENST00000465209 ATG9AQ7Z3C6 839 aa13.75□□□□□ -0.21
COL11A1-207ENST00000465209 ERO1BQ86YB8 467 aa13.75□□□□□ -0.21
COL11A1-207ENST00000465209 SSH1Q8WYL5 1049 aa13.75□□□□□ -0.21
COL11A1-207ENST00000465209 AK9Q5TCS8 1911 aa13.74□□□□□ -0.21
COL11A1-207ENST00000465209 MYH2Q9UKX2 1941 aa13.74□□□□□ -0.21
COL11A1-207ENST00000465209 MGAMO43451 1857 aa13.74□□□□□ -0.21
COL11A1-207ENST00000465209 ATRNL1Q5VV63 1379 aa13.74□□□□□ -0.21
COL11A1-207ENST00000465209 PHIPQ8WWQ0 1821 aa13.74□□□□□ -0.21
COL11A1-207ENST00000465209 CTGFP29279 349 aa13.74□□□□□ -0.21
COL11A1-207ENST00000465209 LACTBP83111 547 aaPredicted RBP13.74□□□□□ -0.21
COL11A1-207ENST00000465209 PPIL2Q13356 520 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms