RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 PSAPL1Q6NUJ1 521 aa3.23□□□□□ -1.89
NUCKS1-202ENST00000464938 ELMSAN1Q6PJG2 1045 aa3.23□□□□□ -1.89
NUCKS1-202ENST00000464938 SHISA2Q6UWI4 295 aa3.23□□□□□ -1.89
NUCKS1-202ENST00000464938 BSNDQ8WZ55 320 aa3.23□□□□□ -1.89
NUCKS1-202ENST00000464938 TP53INP1Q96A56 240 aa3.23□□□□□ -1.89
NUCKS1-202ENST00000464938 NOC4LQ9BVI4 516 aaKnown RBP3.23□□□□□ -1.89
NUCKS1-202ENST00000464938 SMG9Q9H0W8 520 aaKnown RBP3.23□□□□□ -1.89
NUCKS1-202ENST00000464938 RBSNQ9H1K0 784 aa3.23□□□□□ -1.89
NUCKS1-202ENST00000464938 ZNF576Q9H609 170 aa3.23□□□□□ -1.89
NUCKS1-202ENST00000464938 IGFLR1Q9H665 355 aa3.23□□□□□ -1.89
NUCKS1-202ENST00000464938 VTI1BQ9UEU0 232 aa3.23□□□□□ -1.89
NUCKS1-202ENST00000464938 TRIM33Q9UPN9 1127 aa3.23□□□□□ -1.89
NUCKS1-202ENST00000464938 RGS9O75916 674 aaPredicted RBP3.22□□□□□ -1.89
NUCKS1-202ENST00000464938 PTPRAP18433 802 aa3.22□□□□□ -1.89
NUCKS1-202ENST00000464938 CD97P48960 835 aa3.22□□□□□ -1.89
NUCKS1-202ENST00000464938 RAD51AP2Q09MP3 1159 aa3.22□□□□□ -1.89
NUCKS1-202ENST00000464938 FAAP100Q0VG06 881 aa3.22□□□□□ -1.89
NUCKS1-202ENST00000464938 FZD5Q13467 585 aa3.22□□□□□ -1.89
NUCKS1-202ENST00000464938 ZNF423Q2M1K9 1284 aa3.22□□□□□ -1.89
NUCKS1-202ENST00000464938 TSNAXIP1Q2TAA8 658 aa3.22□□□□□ -1.89
NUCKS1-202ENST00000464938 SV2BQ7L1I2 683 aa3.22□□□□□ -1.89
NUCKS1-202ENST00000464938 ERMP1Q7Z2K6 904 aa3.22□□□□□ -1.89
NUCKS1-202ENST00000464938 TMEM87AQ8NBN3 555 aa3.22□□□□□ -1.89
NUCKS1-202ENST00000464938 RSRP1Q9BUV0 290 aa3.22□□□□□ -1.89
NUCKS1-202ENST00000464938 KRTAP17-1Q9BYP8 105 aa3.22□□□□□ -1.89
NUCKS1-202ENST00000464938 KRTAP4-11Q9BYQ6 195 aa3.22□□□□□ -1.89
NUCKS1-202ENST00000464938 BCL11AQ9H165 835 aa3.22□□□□□ -1.89
NUCKS1-202ENST00000464938 MUC3BQ9H195 1237 aa3.22□□□□□ -1.89
NUCKS1-202ENST00000464938 SRA1Q9HD15 236 aaKnown RBP3.22□□□□□ -1.89
NUCKS1-202ENST00000464938 MRS2Q9HD23 443 aa3.22□□□□□ -1.89
NUCKS1-202ENST00000464938 ENC1O14682 589 aa3.21□□□□□ -1.9
NUCKS1-202ENST00000464938 B3GALT4O96024 378 aa3.21□□□□□ -1.9
NUCKS1-202ENST00000464938 ESRRAP11474 423 aaPredicted RBP3.21□□□□□ -1.9
NUCKS1-202ENST00000464938 CDC27P30260 824 aa3.21□□□□□ -1.9
NUCKS1-202ENST00000464938 ZNF76P36508 570 aa3.21□□□□□ -1.9
NUCKS1-202ENST00000464938 FCGRTP55899 365 aa3.21□□□□□ -1.9
NUCKS1-202ENST00000464938 TBC1D8BQ0IIM8 1120 aa3.21□□□□□ -1.9
NUCKS1-202ENST00000464938 LCE4AQ5TA78 99 aa3.21□□□□□ -1.9
NUCKS1-202ENST00000464938 NUDT8Q8WV74 236 aa3.21□□□□□ -1.9
NUCKS1-202ENST00000464938 WNT8BQ93098 351 aa3.21□□□□□ -1.9
NUCKS1-202ENST00000464938 NECAB3Q96P71 396 aaPredicted RBP3.21□□□□□ -1.9
NUCKS1-202ENST00000464938 CLEC4MQ9H2X3 399 aaPredicted RBP3.21□□□□□ -1.9
NUCKS1-202ENST00000464938 SOX17Q9H6I2 414 aaPredicted RBP3.21□□□□□ -1.9
NUCKS1-202ENST00000464938 SEC31BQ9NQW1 1179 aa3.21□□□□□ -1.9
NUCKS1-202ENST00000464938 SH2B1Q9NRF2 756 aaPredicted RBP3.21□□□□□ -1.9
NUCKS1-202ENST00000464938 CACNA2D2Q9NY47 1150 aa3.21□□□□□ -1.9
NUCKS1-202ENST00000464938 KIAA1324LA8MWY0 1029 aaPredicted RBP3.2□□□□□ -1.9
NUCKS1-202ENST00000464938 SOX1O00570 391 aaPredicted RBP3.2□□□□□ -1.9
NUCKS1-202ENST00000464938 LILRB5O75023 590 aa3.2□□□□□ -1.9
NUCKS1-202ENST00000464938 EPHA1P21709 976 aa3.2□□□□□ -1.9
NUCKS1-202ENST00000464938 BMP6P22004 513 aa3.2□□□□□ -1.9
NUCKS1-202ENST00000464938 PCDH1Q08174 1060 aa3.2□□□□□ -1.9
NUCKS1-202ENST00000464938 MSL1Q68DK7 614 aa3.2□□□□□ -1.9
NUCKS1-202ENST00000464938 DTHD1Q6ZMT9 781 aa3.2□□□□□ -1.9
NUCKS1-202ENST00000464938 IL22RA1Q8N6P7 574 aa3.2□□□□□ -1.9
NUCKS1-202ENST00000464938 RNF34Q969K3 372 aa3.2□□□□□ -1.9
NUCKS1-202ENST00000464938 CEP44Q9C0F1 390 aa3.2□□□□□ -1.9
NUCKS1-202ENST00000464938 NRSN2Q9GZP1 204 aa3.2□□□□□ -1.9
NUCKS1-202ENST00000464938 JPH1Q9HDC5 661 aaPredicted RBP3.2□□□□□ -1.9
NUCKS1-202ENST00000464938 KCNQ5Q9NR82 932 aa3.2□□□□□ -1.9
NUCKS1-202ENST00000464938 DDX41Q9UJV9 622 aaKnown RBP3.2□□□□□ -1.9
NUCKS1-202ENST00000464938 H3BRJ5 948 aa3.19□□□□□ -1.9
NUCKS1-202ENST00000464938 EIF4EBP3O60516 100 aaPredicted RBP3.19□□□□□ -1.9
NUCKS1-202ENST00000464938 PAGE1O75459 146 aa3.19□□□□□ -1.9
NUCKS1-202ENST00000464938 MED26O95402 600 aa3.19□□□□□ -1.9
NUCKS1-202ENST00000464938 GARTP22102 1010 aa3.19□□□□□ -1.9
NUCKS1-202ENST00000464938 RPS26P62854 115 aaKnown RBP3.19□□□□□ -1.9
NUCKS1-202ENST00000464938 RACK1P63244 317 aaKnown RBP3.19□□□□□ -1.9
NUCKS1-202ENST00000464938 PIP4K2BP78356 416 aa3.19□□□□□ -1.9
NUCKS1-202ENST00000464938 SETDB1Q15047 1291 aa3.19□□□□□ -1.9
NUCKS1-202ENST00000464938 HGSNATQ68CP4 663 aa3.19□□□□□ -1.9
NUCKS1-202ENST00000464938 SCARA3Q6AZY7 606 aa3.19□□□□□ -1.9
NUCKS1-202ENST00000464938 AGMOQ6ZNB7 445 aa3.19□□□□□ -1.9
NUCKS1-202ENST00000464938 PDZD3Q86UT5 571 aa3.19□□□□□ -1.9
NUCKS1-202ENST00000464938 NT5DC4Q86YG4 428 aa3.19□□□□□ -1.9
NUCKS1-202ENST00000464938 FMR1NBQ8N0W7 255 aaPredicted RBP3.19□□□□□ -1.9
NUCKS1-202ENST00000464938 DTWD1Q8N5C7 304 aa3.19□□□□□ -1.9
NUCKS1-202ENST00000464938 PHC3Q8NDX5 983 aa3.19□□□□□ -1.9
NUCKS1-202ENST00000464938 ASAP3Q8TDY4 903 aa3.19□□□□□ -1.9
NUCKS1-202ENST00000464938 C8orf37Q96NL8 207 aa3.19□□□□□ -1.9
NUCKS1-202ENST00000464938 TGIF2Q9GZN2 237 aa3.19□□□□□ -1.9
NUCKS1-202ENST00000464938 LACRTQ9GZZ8 138 aa3.19□□□□□ -1.9
NUCKS1-202ENST00000464938 OSGEPQ9NPF4 335 aa3.19□□□□□ -1.9
NUCKS1-202ENST00000464938 COPRSQ9NQ92 184 aa3.19□□□□□ -1.9
NUCKS1-202ENST00000464938 TMEM39AQ9NV64 488 aa3.19□□□□□ -1.9
NUCKS1-202ENST00000464938 AKAP2Q9Y2D5 859 aa3.19□□□□□ -1.9
NUCKS1-202ENST00000464938 PPME1Q9Y570 386 aa3.19□□□□□ -1.9
NUCKS1-202ENST00000464938 OAS3Q9Y6K5 1087 aaKnown RBP3.19□□□□□ -1.9
NUCKS1-202ENST00000464938 LINC01387J3KSC0 135 aa3.18□□□□□ -1.9
NUCKS1-202ENST00000464938 DLL1O00548 723 aa3.18□□□□□ -1.9
NUCKS1-202ENST00000464938 FSCN2O14926 492 aa3.18□□□□□ -1.9
NUCKS1-202ENST00000464938 GREM1O60565 184 aa3.18□□□□□ -1.9
NUCKS1-202ENST00000464938 DEAF1O75398 565 aaPredicted RBP3.18□□□□□ -1.9
NUCKS1-202ENST00000464938 CELA3AP09093 270 aa3.18□□□□□ -1.9
NUCKS1-202ENST00000464938 RLBP1P12271 317 aa3.18□□□□□ -1.9
NUCKS1-202ENST00000464938 TAL1P17542 331 aaPredicted RBP3.18□□□□□ -1.9
NUCKS1-202ENST00000464938 NME2P22392 152 aa3.18□□□□□ -1.9
NUCKS1-202ENST00000464938 NOS3P29474 1203 aa3.18□□□□□ -1.9
NUCKS1-202ENST00000464938 JAG1P78504 1218 aa3.18□□□□□ -1.9
NUCKS1-202ENST00000464938 ZNF252P-AS1Q0IIN9 211 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms