RNA–Protein interactions for RNA: ENST00000464673.1

LINC01998-201, Transcript of long intergenic non-protein coding RNA 1998, humanhuman

TSL 1 (best) BASIC

Gene LINC01998, Length 1,967 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01998-201ENST00000464673 VPS37DQ86XT2 251 aa11.68□□□□□ -0.54
LINC01998-201ENST00000464673 PSMD1Q99460 953 aa11.68□□□□□ -0.54
LINC01998-201ENST00000464673 ZC3H12CQ9C0D7 883 aaKnown RBP11.68□□□□□ -0.54
LINC01998-201ENST00000464673 RIMBP2O15034 1052 aa11.68□□□□□ -0.54
LINC01998-201ENST00000464673 ZSCAN22P10073 491 aaPredicted RBP11.68□□□□□ -0.54
LINC01998-201ENST00000464673 HIBADHP31937 336 aaKnown RBP11.68□□□□□ -0.54
LINC01998-201ENST00000464673 MCM5P33992 734 aa11.68□□□□□ -0.54
LINC01998-201ENST00000464673 FBXO33Q7Z6M2 555 aa11.68□□□□□ -0.54
LINC01998-201ENST00000464673 ALDH8A1Q9H2A2 487 aaPredicted RBP11.68□□□□□ -0.54
LINC01998-201ENST00000464673 ARFGEF1Q9Y6D6 1849 aa11.68□□□□□ -0.54
LINC01998-201ENST00000464673 MED23Q9ULK4 1368 aa11.67□□□□□ -0.54
LINC01998-201ENST00000464673 SYCE3A1L190 88 aa11.67□□□□□ -0.54
LINC01998-201ENST00000464673 ATP5JP18859 108 aa11.67□□□□□ -0.54
LINC01998-201ENST00000464673 TTC39AQ5SRH9 613 aa11.67□□□□□ -0.54
LINC01998-201ENST00000464673 CHAMP1Q96JM3 812 aa11.67□□□□□ -0.54
LINC01998-201ENST00000464673 EYA3Q99504 573 aa11.67□□□□□ -0.54
LINC01998-201ENST00000464673 NOL7Q9UMY1 257 aaKnown RBP11.67□□□□□ -0.54
LINC01998-201ENST00000464673 ARAP2Q8WZ64 1704 aa11.67□□□□□ -0.54
LINC01998-201ENST00000464673 NFKBIEO00221 500 aa11.67□□□□□ -0.54
LINC01998-201ENST00000464673 ZNF500O60304 480 aaPredicted RBP11.67□□□□□ -0.54
LINC01998-201ENST00000464673 YBX3P16989 372 aaKnown RBP eCLIP11.67□□□□□ -0.54
LINC01998-201ENST00000464673 FKBP4Q02790 459 aaKnown RBP eCLIP11.67□□□□□ -0.54
LINC01998-201ENST00000464673 PTH1RQ03431 593 aa11.67□□□□□ -0.54
LINC01998-201ENST00000464673 FAM184AQ8NB25 1140 aa11.67□□□□□ -0.54
LINC01998-201ENST00000464673 SUPT20HQ8NEM7 779 aa11.67□□□□□ -0.54
LINC01998-201ENST00000464673 MAP4K1Q92918 833 aa11.67□□□□□ -0.54
LINC01998-201ENST00000464673 TAOK3Q9H2K8 898 aa11.67□□□□□ -0.54
LINC01998-201ENST00000464673 BOLA2Q9H3K6 86 aa11.67□□□□□ -0.54
LINC01998-201ENST00000464673 IQSEC3Q9UPP2 1182 aaPredicted RBP11.67□□□□□ -0.54
LINC01998-201ENST00000464673 ATP6V1DQ9Y5K8 247 aa11.67□□□□□ -0.54
LINC01998-201ENST00000464673 FER1L6Q2WGJ9 1857 aa11.66□□□□□ -0.54
LINC01998-201ENST00000464673 STX6O43752 255 aa11.66□□□□□ -0.54
LINC01998-201ENST00000464673 SYT1P21579 422 aa11.66□□□□□ -0.54
LINC01998-201ENST00000464673 TERF1P54274 439 aa11.66□□□□□ -0.54
LINC01998-201ENST00000464673 SCARF1Q14162 830 aa11.66□□□□□ -0.54
LINC01998-201ENST00000464673 UVSSAQ2YD98 709 aa11.66□□□□□ -0.54
LINC01998-201ENST00000464673 NOL8Q76FK4 1167 aaKnown RBP11.66□□□□□ -0.54
LINC01998-201ENST00000464673 ZNF804AQ7Z570 1209 aa11.66□□□□□ -0.54
LINC01998-201ENST00000464673 USP48Q86UV5 1035 aa11.66□□□□□ -0.54
LINC01998-201ENST00000464673 ZNF512BQ96KM6 892 aaPredicted RBP11.66□□□□□ -0.54
LINC01998-201ENST00000464673 TSPY26PQ9H489 355 aa11.66□□□□□ -0.54
LINC01998-201ENST00000464673 ZNF277Q9NRM2 450 aaPredicted RBP11.66□□□□□ -0.54
LINC01998-201ENST00000464673 GNL3LQ9NVN8 582 aaKnown RBP11.66□□□□□ -0.54
LINC01998-201ENST00000464673 LETM1O95202 739 aaPredicted RBP11.65□□□□□ -0.54
LINC01998-201ENST00000464673 F13A1P00488 732 aa11.65□□□□□ -0.54
LINC01998-201ENST00000464673 UQCRFS1P1P0C7P4 283 aa11.65□□□□□ -0.54
LINC01998-201ENST00000464673 CASTP20810 708 aaKnown RBP11.65□□□□□ -0.54
LINC01998-201ENST00000464673 ARID4AP29374 1257 aaPredicted RBP11.65□□□□□ -0.54
LINC01998-201ENST00000464673 MCAMP43121 646 aa11.65□□□□□ -0.54
LINC01998-201ENST00000464673 KIAA2012Q0VF49 1180 aa11.65□□□□□ -0.54
LINC01998-201ENST00000464673 RASGRF1Q13972 1273 aa11.65□□□□□ -0.54
LINC01998-201ENST00000464673 AOC3Q16853 763 aa11.65□□□□□ -0.54
LINC01998-201ENST00000464673 TSGA10IPQ3SY00 556 aa11.65□□□□□ -0.54
LINC01998-201ENST00000464673 PI16Q6UXB8 463 aa11.65□□□□□ -0.54
LINC01998-201ENST00000464673 CD209Q9NNX6 404 aa11.65□□□□□ -0.54
LINC01998-201ENST00000464673 SMC3Q9UQE7 1217 aa11.65□□□□□ -0.54
LINC01998-201ENST00000464673 CYP46A1Q9Y6A2 500 aa11.65□□□□□ -0.54
LINC01998-201ENST00000464673 NDUFB9Q9Y6M9 179 aa11.65□□□□□ -0.54
LINC01998-201ENST00000464673 PPIP5K2O43314 1243 aa11.65□□□□□ -0.55
LINC01998-201ENST00000464673 OFD1O75665 1012 aa11.65□□□□□ -0.55
LINC01998-201ENST00000464673 UBE2HP62256 183 aa11.65□□□□□ -0.55
LINC01998-201ENST00000464673 DOK7Q18PE1 504 aa11.65□□□□□ -0.55
LINC01998-201ENST00000464673 CSPP1Q1MSJ5 1256 aa11.65□□□□□ -0.55
LINC01998-201ENST00000464673 FOXD4L5Q5VV16 416 aaPredicted RBP11.65□□□□□ -0.55
LINC01998-201ENST00000464673 ARHGAP27Q6ZUM4 889 aa11.65□□□□□ -0.55
LINC01998-201ENST00000464673 TICAM2Q86XR7 235 aa11.65□□□□□ -0.55
LINC01998-201ENST00000464673 FOXD4L4Q8WXT5 416 aaPredicted RBP11.65□□□□□ -0.55
LINC01998-201ENST00000464673 PDRG1Q9NUG6 133 aa11.65□□□□□ -0.55
LINC01998-201ENST00000464673 G3V3G9 751 aa11.64□□□□□ -0.55
LINC01998-201ENST00000464673 IL1R1P14778 569 aa11.64□□□□□ -0.55
LINC01998-201ENST00000464673 ZKSCAN1P17029 563 aaPredicted RBP11.64□□□□□ -0.55
LINC01998-201ENST00000464673 MSNP26038 577 aaKnown RBP11.64□□□□□ -0.55
LINC01998-201ENST00000464673 GPR162Q16538 588 aa11.64□□□□□ -0.55
LINC01998-201ENST00000464673 CCDC183Q5T5S1 534 aa11.64□□□□□ -0.55
LINC01998-201ENST00000464673 DCAF8Q5TAQ9 597 aa11.64□□□□□ -0.55
LINC01998-201ENST00000464673 CREB3L3Q68CJ9 461 aa11.64□□□□□ -0.55
LINC01998-201ENST00000464673 TDRD7Q8NHU6 1098 aaKnown RBP11.64□□□□□ -0.55
LINC01998-201ENST00000464673 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.64□□□□□ -0.55
LINC01998-201ENST00000464673 JAKMIP1Q96N16 626 aaKnown RBP11.64□□□□□ -0.55
LINC01998-201ENST00000464673 NAP1L5Q96NT1 182 aaPredicted RBP11.64□□□□□ -0.55
LINC01998-201ENST00000464673 DNAJC2Q99543 621 aaKnown RBP11.64□□□□□ -0.55
LINC01998-201ENST00000464673 HAUS7Q99871 368 aa11.64□□□□□ -0.55
LINC01998-201ENST00000464673 COA1Q9GZY4 146 aa11.64□□□□□ -0.55
LINC01998-201ENST00000464673 VPS33BQ9H267 617 aa11.64□□□□□ -0.55
LINC01998-201ENST00000464673 DBNDD1Q9H9R9 158 aa11.64□□□□□ -0.55
LINC01998-201ENST00000464673 HMG20BQ9P0W2 317 aa11.64□□□□□ -0.55
LINC01998-201ENST00000464673 RBM8AQ9Y5S9 174 aaKnown RBP11.64□□□□□ -0.55
LINC01998-201ENST00000464673 LTBP3Q9NS15 1303 aa11.64□□□□□ -0.55
LINC01998-201ENST00000464673 AKAP11Q9UKA4 1901 aa11.63□□□□□ -0.55
LINC01998-201ENST00000464673 GADD45BO75293 160 aaPredicted RBP11.63□□□□□ -0.55
LINC01998-201ENST00000464673 TPM2P07951 284 aa11.63□□□□□ -0.55
LINC01998-201ENST00000464673 PSMA5P28066 241 aa11.63□□□□□ -0.55
LINC01998-201ENST00000464673 IARSP41252 1262 aaKnown RBP11.63□□□□□ -0.55
LINC01998-201ENST00000464673 RASSF7Q02833 373 aa11.63□□□□□ -0.55
LINC01998-201ENST00000464673 ST3GAL1Q11201 340 aa11.63□□□□□ -0.55
LINC01998-201ENST00000464673 NMIQ13287 307 aaPredicted RBP11.63□□□□□ -0.55
LINC01998-201ENST00000464673 ADCK5Q3MIX3 580 aa11.63□□□□□ -0.55
LINC01998-201ENST00000464673 LARGE2Q8N3Y3 721 aa11.63□□□□□ -0.55
LINC01998-201ENST00000464673 SPATA5Q8NB90 893 aa11.63□□□□□ -0.55
LINC01998-201ENST00000464673 MTMR6Q9Y217 621 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms