RNA–Protein interactions for RNA: ENST00000464539.1

TNRC6A-205, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 1 (best)

Gene TNRC6A, Length 1,853 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-205ENST00000464539 TOB2Q14106 344 aaPredicted RBP13.33□□□□□ -0.28
TNRC6A-205ENST00000464539 ZRSR1Q15695 479 aaKnown RBP13.33□□□□□ -0.28
TNRC6A-205ENST00000464539 TTC31Q49AM3 519 aaPredicted RBP13.33□□□□□ -0.28
TNRC6A-205ENST00000464539 PAXIP1Q6ZW49 1069 aaPredicted RBP13.33□□□□□ -0.28
TNRC6A-205ENST00000464539 CHMP4CQ96CF2 233 aa13.33□□□□□ -0.28
TNRC6A-205ENST00000464539 LCMT1Q9UIC8 334 aa13.33□□□□□ -0.28
TNRC6A-205ENST00000464539 PARP3Q9Y6F1 533 aa13.33□□□□□ -0.28
TNRC6A-205ENST00000464539 CBFA2T2O43439 604 aa13.32□□□□□ -0.28
TNRC6A-205ENST00000464539 SEC31AO94979 1220 aaKnown RBP13.32□□□□□ -0.28
TNRC6A-205ENST00000464539 ADD1P35611 737 aaKnown RBP13.32□□□□□ -0.28
TNRC6A-205ENST00000464539 GORABQ5T7V8 394 aa13.32□□□□□ -0.28
TNRC6A-205ENST00000464539 ERC1Q8IUD2 1116 aa13.32□□□□□ -0.28
TNRC6A-205ENST00000464539 BRF1Q92994 677 aa13.32□□□□□ -0.28
TNRC6A-205ENST00000464539 XPO4Q9C0E2 1151 aaKnown RBP13.32□□□□□ -0.28
TNRC6A-205ENST00000464539 ZCCHC17Q9NP64 241 aaKnown RBP13.32□□□□□ -0.28
TNRC6A-205ENST00000464539 JRKLQ9Y4A0 524 aa13.32□□□□□ -0.28
TNRC6A-205ENST00000464539 PIK3C2AO00443 1686 aa13.32□□□□□ -0.28
TNRC6A-205ENST00000464539 IKBKBO14920 756 aa13.31□□□□□ -0.28
TNRC6A-205ENST00000464539 SRGAP3O43295 1099 aa13.31□□□□□ -0.28
TNRC6A-205ENST00000464539 LMAN1P49257 510 aa13.31□□□□□ -0.28
TNRC6A-205ENST00000464539 PPM1EQ8WY54 764 aa13.31□□□□□ -0.28
TNRC6A-205ENST00000464539 TFCP2L1Q9NZI6 479 aa13.31□□□□□ -0.28
TNRC6A-205ENST00000464539 IFNKQ9P0W0 207 aa13.31□□□□□ -0.28
TNRC6A-205ENST00000464539 A0A1W2PQ27 194 aa13.31□□□□□ -0.28
TNRC6A-205ENST00000464539 A0A1W2PQ64 194 aa13.31□□□□□ -0.28
TNRC6A-205ENST00000464539 A0A1W2PQD8 194 aa13.31□□□□□ -0.28
TNRC6A-205ENST00000464539 EIF3JO75822 258 aaKnown RBP13.31□□□□□ -0.28
TNRC6A-205ENST00000464539 AXDND1Q5T1B0 1012 aaPredicted RBP13.31□□□□□ -0.28
TNRC6A-205ENST00000464539 CERS3Q8IU89 383 aa13.31□□□□□ -0.28
TNRC6A-205ENST00000464539 SMARCC2Q8TAQ2 1214 aa13.31□□□□□ -0.28
TNRC6A-205ENST00000464539 GOLGA1Q92805 767 aa13.31□□□□□ -0.28
TNRC6A-205ENST00000464539 HDAC5Q9UQL6 1122 aa13.31□□□□□ -0.28
TNRC6A-205ENST00000464539 TXLNAP40222 546 aa13.3□□□□□ -0.28
TNRC6A-205ENST00000464539 TUBB2AQ13885 445 aa13.3□□□□□ -0.28
TNRC6A-205ENST00000464539 SUGP1Q8IWZ8 645 aaKnown RBP13.3□□□□□ -0.28
TNRC6A-205ENST00000464539 TUBB2BQ9BVA1 445 aa13.3□□□□□ -0.28
TNRC6A-205ENST00000464539 PARD6BQ9BYG5 372 aa13.3□□□□□ -0.28
TNRC6A-205ENST00000464539 GOLPH3LQ9H4A5 285 aa13.3□□□□□ -0.28
TNRC6A-205ENST00000464539 DEF6Q9H4E7 631 aa13.3□□□□□ -0.28
TNRC6A-205ENST00000464539 KIAA1468Q9P260 1216 aa13.3□□□□□ -0.28
TNRC6A-205ENST00000464539 CACNA1FO60840 1977 aa13.3□□□□□ -0.28
TNRC6A-205ENST00000464539 ARHGAP6O43182 974 aa13.29□□□□□ -0.28
TNRC6A-205ENST00000464539 CPP00450 1065 aa13.29□□□□□ -0.28
TNRC6A-205ENST00000464539 TUBBP07437 444 aa13.29□□□□□ -0.28
TNRC6A-205ENST00000464539 APLP1P51693 650 aa13.29□□□□□ -0.28
TNRC6A-205ENST00000464539 NLRP12P59046 1061 aa13.29□□□□□ -0.28
TNRC6A-205ENST00000464539 PPP2R3AQ06190 1150 aa13.29□□□□□ -0.28
TNRC6A-205ENST00000464539 MTX1Q13505 466 aa13.29□□□□□ -0.28
TNRC6A-205ENST00000464539 FMR1NBQ8N0W7 255 aaPredicted RBP13.29□□□□□ -0.28
TNRC6A-205ENST00000464539 DDX11Q96FC9 970 aa13.29□□□□□ -0.28
TNRC6A-205ENST00000464539 ZFP91Q96JP5 570 aaPredicted RBP13.29□□□□□ -0.28
TNRC6A-205ENST00000464539 MIS18AQ9NYP9 233 aa13.29□□□□□ -0.28
TNRC6A-205ENST00000464539 MRFAP1Q9Y605 127 aa13.29□□□□□ -0.28
TNRC6A-205ENST00000464539 RGPD5Q99666 1765 aa13.29□□□□□ -0.28
TNRC6A-205ENST00000464539 IL2RBP14784 551 aa13.29□□□□□ -0.28
TNRC6A-205ENST00000464539 LONRF2Q1L5Z9 754 aa13.29□□□□□ -0.28
TNRC6A-205ENST00000464539 SWT1Q5T5J6 900 aaKnown RBP13.29□□□□□ -0.28
TNRC6A-205ENST00000464539 ADALQ6DHV7 355 aa13.29□□□□□ -0.28
TNRC6A-205ENST00000464539 HDXQ7Z353 690 aa13.29□□□□□ -0.28
TNRC6A-205ENST00000464539 FSIP1Q8NA03 581 aa13.29□□□□□ -0.28
TNRC6A-205ENST00000464539 ZNF526Q8TF50 670 aaPredicted RBP13.29□□□□□ -0.28
TNRC6A-205ENST00000464539 MRPS27Q92552 414 aaKnown RBP13.29□□□□□ -0.28
TNRC6A-205ENST00000464539 SDF4Q9BRK5 362 aa13.29□□□□□ -0.28
TNRC6A-205ENST00000464539 FAM107BQ9H098 131 aa13.29□□□□□ -0.28
TNRC6A-205ENST00000464539 ERLIN1O75477 346 aa13.28□□□□□ -0.28
TNRC6A-205ENST00000464539 IFIT2P09913 472 aaKnown RBP13.28□□□□□ -0.28
TNRC6A-205ENST00000464539 ATP2B1P20020 1258 aa13.28□□□□□ -0.28
TNRC6A-205ENST00000464539 USP5P45974 858 aa13.28□□□□□ -0.28
TNRC6A-205ENST00000464539 CORO7P57737 925 aa13.28□□□□□ -0.28
TNRC6A-205ENST00000464539 USPL1Q5W0Q7 1092 aa13.28□□□□□ -0.28
TNRC6A-205ENST00000464539 PPP4R3CPQ6ZMV5 832 aa13.28□□□□□ -0.28
TNRC6A-205ENST00000464539 MON2Q7Z3U7 1717 aa13.27□□□□□ -0.28
TNRC6A-205ENST00000464539 CLGNO14967 610 aa13.27□□□□□ -0.28
TNRC6A-205ENST00000464539 SOX12O15370 315 aa13.27□□□□□ -0.28
TNRC6A-205ENST00000464539 FANCCQ00597 558 aa13.27□□□□□ -0.28
TNRC6A-205ENST00000464539 APOBRQ0VD83 1088 aa13.27□□□□□ -0.28
TNRC6A-205ENST00000464539 FAM208AQ9UK61 1670 aaKnown RBP13.27□□□□□ -0.28
TNRC6A-205ENST00000464539 DTNBO60941 627 aa13.27□□□□□ -0.29
TNRC6A-205ENST00000464539 NMIQ13287 307 aaPredicted RBP13.27□□□□□ -0.29
TNRC6A-205ENST00000464539 OS9Q13438 667 aaPredicted RBP13.27□□□□□ -0.29
TNRC6A-205ENST00000464539 MTHFSDQ2M296 383 aaKnown RBP13.27□□□□□ -0.29
TNRC6A-205ENST00000464539 CCDC34Q96HJ3 373 aa13.27□□□□□ -0.29
TNRC6A-205ENST00000464539 CD2APQ9Y5K6 639 aa13.27□□□□□ -0.29
TNRC6A-205ENST00000464539 NFAT5O94916 1531 aa13.26□□□□□ -0.29
TNRC6A-205ENST00000464539 VWA3AA6NCI4 1184 aa13.26□□□□□ -0.29
TNRC6A-205ENST00000464539 EIF3CLB5ME19 914 aaKnown RBP13.26□□□□□ -0.29
TNRC6A-205ENST00000464539 ALDH1L1O75891 902 aa13.26□□□□□ -0.29
TNRC6A-205ENST00000464539 GYS2P54840 703 aa13.26□□□□□ -0.29
TNRC6A-205ENST00000464539 STK3Q13188 491 aa13.26□□□□□ -0.29
TNRC6A-205ENST00000464539 GNL2Q13823 731 aaKnown RBP13.26□□□□□ -0.29
TNRC6A-205ENST00000464539 NCAPHQ15003 741 aa13.26□□□□□ -0.29
TNRC6A-205ENST00000464539 CCDC91Q7Z6B0 441 aa13.26□□□□□ -0.29
TNRC6A-205ENST00000464539 EFCAB13Q8IY85 973 aa13.26□□□□□ -0.29
TNRC6A-205ENST00000464539 NEK1Q96PY6 1258 aa13.26□□□□□ -0.29
TNRC6A-205ENST00000464539 EIF3CQ99613 913 aaKnown RBP13.26□□□□□ -0.29
TNRC6A-205ENST00000464539 GBP3Q9H0R5 595 aa13.26□□□□□ -0.29
TNRC6A-205ENST00000464539 ACBD3Q9H3P7 528 aa13.26□□□□□ -0.29
TNRC6A-205ENST00000464539 NLRP2Q9NX02 1062 aa13.26□□□□□ -0.29
TNRC6A-205ENST00000464539 RTEL1Q9NZ71 1219 aa13.26□□□□□ -0.29
TNRC6A-205ENST00000464539 RAB21Q9UL25 225 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms