RNA–Protein interactions for RNA: ENST00000464408.3

ALMS1-202, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 5

Gene ALMS1, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-202ENST00000464408 GPR25O00155 361 aa18.19■□□□□ 0.5
ALMS1-202ENST00000464408 CACNB3P54284 484 aa18.19■□□□□ 0.5
ALMS1-202ENST00000464408 SOX10P56693 466 aa18.19■□□□□ 0.5
ALMS1-202ENST00000464408 SUPT20HL1Q3ZLR7 823 aa18.19■□□□□ 0.5
ALMS1-202ENST00000464408 TEPSINQ96N21 525 aa18.19■□□□□ 0.5
ALMS1-202ENST00000464408 TMEM39BQ9GZU3 492 aa18.19■□□□□ 0.5
ALMS1-202ENST00000464408 NOB1Q9ULX3 412 aaKnown RBP18.19■□□□□ 0.5
ALMS1-202ENST00000464408 EYA2O00167 538 aa18.18■□□□□ 0.5
ALMS1-202ENST00000464408 FRAT2O75474 233 aaPredicted RBP18.18■□□□□ 0.5
ALMS1-202ENST00000464408 PUM3Q15397 648 aaKnown RBP18.18■□□□□ 0.5
ALMS1-202ENST00000464408 CAVIN4Q5BKX8 364 aa18.18■□□□□ 0.5
ALMS1-202ENST00000464408 ATG9AQ7Z3C6 839 aa18.18■□□□□ 0.5
ALMS1-202ENST00000464408 IGF2BP3O00425 579 aaKnown RBP eCLIP18.17■□□□□ 0.5
ALMS1-202ENST00000464408 IREB2P48200 963 aaKnown RBP18.17■□□□□ 0.5
ALMS1-202ENST00000464408 IFNL1Q8IU54 200 aa18.17■□□□□ 0.5
ALMS1-202ENST00000464408 SIL1Q9H173 461 aa18.17■□□□□ 0.5
ALMS1-202ENST00000464408 HPS5Q9UPZ3 1129 aa18.17■□□□□ 0.5
ALMS1-202ENST00000464408 ZBTB48P10074 688 aaPredicted RBP18.16■□□□□ 0.5
ALMS1-202ENST00000464408 TNFAIP1Q13829 316 aa18.16■□□□□ 0.5
ALMS1-202ENST00000464408 CNKSR2Q8WXI2 1034 aa18.16■□□□□ 0.5
ALMS1-202ENST00000464408 CFHR5Q9BXR6 569 aa18.16■□□□□ 0.5
ALMS1-202ENST00000464408 ELP3Q9H9T3 547 aa18.16■□□□□ 0.5
ALMS1-202ENST00000464408 LRRFIP2Q9Y608 721 aaKnown RBP18.16■□□□□ 0.5
ALMS1-202ENST00000464408 PDE4DIPQ5VU43 2346 aa18.15■□□□□ 0.5
ALMS1-202ENST00000464408 MANSC4A6NHS7 340 aaPredicted RBP18.15■□□□□ 0.5
ALMS1-202ENST00000464408 UBTFL1P0CB47 393 aaPredicted RBP18.15■□□□□ 0.5
ALMS1-202ENST00000464408 TBC1D22AQ8WUA7 517 aa18.15■□□□□ 0.5
ALMS1-202ENST00000464408 PA2G4Q9UQ80 394 aaKnown RBP18.15■□□□□ 0.5
ALMS1-202ENST00000464408 HTTP42858 3142 aa18.14■□□□□ 0.5
ALMS1-202ENST00000464408 FKTNO75072 461 aa18.14■□□□□ 0.49
ALMS1-202ENST00000464408 IFIT1P09914 478 aaKnown RBP18.14■□□□□ 0.49
ALMS1-202ENST00000464408 NOM1Q5C9Z4 860 aaKnown RBP18.14■□□□□ 0.49
ALMS1-202ENST00000464408 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.14■□□□□ 0.49
ALMS1-202ENST00000464408 ANKRD13AQ8IZ07 590 aa18.14■□□□□ 0.49
ALMS1-202ENST00000464408 TEKT1Q969V4 418 aa18.14■□□□□ 0.49
ALMS1-202ENST00000464408 MEIS3Q99687 375 aa18.14■□□□□ 0.49
ALMS1-202ENST00000464408 KIF16BQ96L93 1317 aa18.14■□□□□ 0.49
ALMS1-202ENST00000464408 CCER2I3L3R5 266 aa18.13■□□□□ 0.49
ALMS1-202ENST00000464408 SLC5A1P13866 664 aa18.13■□□□□ 0.49
ALMS1-202ENST00000464408 RARSP54136 660 aaKnown RBP18.13■□□□□ 0.49
ALMS1-202ENST00000464408 HDLBPQ00341 1268 aaKnown RBP18.13■□□□□ 0.49
ALMS1-202ENST00000464408 APOBEC3HQ6NTF7 200 aaKnown RBP18.13■□□□□ 0.49
ALMS1-202ENST00000464408 LPIN2Q92539 896 aa18.13■□□□□ 0.49
ALMS1-202ENST00000464408 OPTNQ96CV9 577 aa18.13■□□□□ 0.49
ALMS1-202ENST00000464408 PTPN18Q99952 460 aa18.13■□□□□ 0.49
ALMS1-202ENST00000464408 UNCXA6NJT0 531 aa18.12■□□□□ 0.49
ALMS1-202ENST00000464408 CT47B1P0C2W7 299 aaPredicted RBP18.12■□□□□ 0.49
ALMS1-202ENST00000464408 VGLL4Q14135 290 aa18.12■□□□□ 0.49
ALMS1-202ENST00000464408 ZDHHC15Q96MV8 337 aa18.12■□□□□ 0.49
ALMS1-202ENST00000464408 API5Q9BZZ5 524 aaKnown RBP18.12■□□□□ 0.49
ALMS1-202ENST00000464408 TNNQ9UQP3 1299 aa18.12■□□□□ 0.49
ALMS1-202ENST00000464408 ALDH1A1P00352 501 aa18.11■□□□□ 0.49
ALMS1-202ENST00000464408 TNNI2P48788 182 aa18.11■□□□□ 0.49
ALMS1-202ENST00000464408 INHBEP58166 350 aa18.11■□□□□ 0.49
ALMS1-202ENST00000464408 CRHR2Q13324 411 aa18.11■□□□□ 0.49
ALMS1-202ENST00000464408 ATP2B3Q16720 1220 aa18.11■□□□□ 0.49
ALMS1-202ENST00000464408 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.11■□□□□ 0.49
ALMS1-202ENST00000464408 CIAO1O76071 339 aa18.1■□□□□ 0.49
ALMS1-202ENST00000464408 ADORA1P30542 326 aa18.1■□□□□ 0.49
ALMS1-202ENST00000464408 CAP1Q01518 475 aa18.1■□□□□ 0.49
ALMS1-202ENST00000464408 DIXDC1Q155Q3 683 aa18.1■□□□□ 0.49
ALMS1-202ENST00000464408 MS4A4AQ96JQ5 239 aa18.1■□□□□ 0.49
ALMS1-202ENST00000464408 CENPFP49454 3210 aa18.1■□□□□ 0.49
ALMS1-202ENST00000464408 AK9Q5TCS8 1911 aa18.1■□□□□ 0.49
ALMS1-202ENST00000464408 TESPA1A2RU30 521 aaPredicted RBP18.09■□□□□ 0.49
ALMS1-202ENST00000464408 PRDX5P30044 214 aa18.09■□□□□ 0.49
ALMS1-202ENST00000464408 PHKA1P46020 1223 aa18.09■□□□□ 0.49
ALMS1-202ENST00000464408 MAP3K9P80192 1104 aa18.09■□□□□ 0.49
ALMS1-202ENST00000464408 PKN2Q16513 984 aaKnown RBP18.09■□□□□ 0.49
ALMS1-202ENST00000464408 HHIPL2Q6UWX4 724 aa18.09■□□□□ 0.49
ALMS1-202ENST00000464408 BRI3BPQ8WY22 251 aa18.09■□□□□ 0.49
ALMS1-202ENST00000464408 MRIQ9BWK5 157 aa18.09■□□□□ 0.49
ALMS1-202ENST00000464408 CEP126Q9P2H0 1117 aa18.09■□□□□ 0.49
ALMS1-202ENST00000464408 SUGT1Q9Y2Z0 365 aa18.09■□□□□ 0.49
ALMS1-202ENST00000464408 MYH2Q9UKX2 1941 aa18.08■□□□□ 0.49
ALMS1-202ENST00000464408 MAST3O60307 1309 aa18.08■□□□□ 0.49
ALMS1-202ENST00000464408 FBXO46Q6PJ61 603 aaPredicted RBP18.08■□□□□ 0.48
ALMS1-202ENST00000464408 WDR66Q8TBY9 1149 aa18.08■□□□□ 0.48
ALMS1-202ENST00000464408 OTUD5Q96G74 571 aa18.08■□□□□ 0.48
ALMS1-202ENST00000464408 DAGLAQ9Y4D2 1042 aa18.08■□□□□ 0.48
ALMS1-202ENST00000464408 SNCAIPQ9Y6H5 919 aa18.08■□□□□ 0.48
ALMS1-202ENST00000464408 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.08■□□□□ 0.48
ALMS1-202ENST00000464408 INTS3Q68E01 1043 aaKnown RBP18.07■□□□□ 0.48
ALMS1-202ENST00000464408 FAM83AQ86UY5 434 aa18.07■□□□□ 0.48
ALMS1-202ENST00000464408 CD99L2Q8TCZ2 262 aa18.07■□□□□ 0.48
ALMS1-202ENST00000464408 ZKSCAN4Q969J2 545 aaPredicted RBP18.07■□□□□ 0.48
ALMS1-202ENST00000464408 TMOD2Q9NZR1 351 aa18.07■□□□□ 0.48
ALMS1-202ENST00000464408 FBXO3Q9UK99 471 aa18.07■□□□□ 0.48
ALMS1-202ENST00000464408 TRIM17Q9Y577 477 aa18.07■□□□□ 0.48
ALMS1-202ENST00000464408 ZSWIM8A7E2V4 1837 aa18.07■□□□□ 0.48
ALMS1-202ENST00000464408 CCL15-CCL14A0A0B4J2E2 113 aa18.06■□□□□ 0.48
ALMS1-202ENST00000464408 IL15P40933 162 aaPredicted RBP18.06■□□□□ 0.48
ALMS1-202ENST00000464408 NFIAQ12857 509 aa18.06■□□□□ 0.48
ALMS1-202ENST00000464408 CCL15Q16663 113 aa18.06■□□□□ 0.48
ALMS1-202ENST00000464408 FKBP1CQ5VVH2 108 aa18.06■□□□□ 0.48
ALMS1-202ENST00000464408 CDC42EP5Q6NZY7 148 aa18.06■□□□□ 0.48
ALMS1-202ENST00000464408 MIGA2Q7L4E1 593 aa18.06■□□□□ 0.48
ALMS1-202ENST00000464408 OTOP1Q7RTM1 612 aa18.06■□□□□ 0.48
ALMS1-202ENST00000464408 WRNIP1Q96S55 665 aa18.06■□□□□ 0.48
ALMS1-202ENST00000464408 COPRSQ9NQ92 184 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms