RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 CNBD1Q8NA66 436 aa25.64■■□□□ 1.69
PDLIM2-216ENST00000464275 FAM84BQ96KN1 310 aaPredicted RBP25.64■■□□□ 1.69
PDLIM2-216ENST00000464275 MYH15Q9Y2K3 1946 aa25.63■■□□□ 1.69
PDLIM2-216ENST00000464275 SEMA3EO15041 775 aa25.63■■□□□ 1.69
PDLIM2-216ENST00000464275 DTNBO60941 627 aa25.63■■□□□ 1.69
PDLIM2-216ENST00000464275 GNAT2P19087 354 aa25.63■■□□□ 1.69
PDLIM2-216ENST00000464275 EVCP57679 992 aa25.63■■□□□ 1.69
PDLIM2-216ENST00000464275 FOXD4L6Q3SYB3 417 aaPredicted RBP25.63■■□□□ 1.69
PDLIM2-216ENST00000464275 FOXD4L3Q6VB84 417 aaPredicted RBP25.63■■□□□ 1.69
PDLIM2-216ENST00000464275 PNPLA7Q6ZV29 1317 aa25.62■■□□□ 1.69
PDLIM2-216ENST00000464275 TIAM2Q8IVF5 1701 aa25.62■■□□□ 1.69
PDLIM2-216ENST00000464275 CHST3Q7LGC8 479 aa25.62■■□□□ 1.69
PDLIM2-216ENST00000464275 FBXO33Q7Z6M2 555 aa25.62■■□□□ 1.69
PDLIM2-216ENST00000464275 TRIM44Q96DX7 344 aaPredicted RBP25.62■■□□□ 1.69
PDLIM2-216ENST00000464275 IQSEC3Q9UPP2 1182 aaPredicted RBP25.62■■□□□ 1.69
PDLIM2-216ENST00000464275 COL1A1P02452 1464 aaPredicted RBP25.62■■□□□ 1.69
PDLIM2-216ENST00000464275 PRC1O43663 620 aa25.62■■□□□ 1.69
PDLIM2-216ENST00000464275 TRDNQ13061 729 aa25.62■■□□□ 1.69
PDLIM2-216ENST00000464275 CAVIN1Q6NZI2 390 aaKnown RBP25.62■■□□□ 1.69
PDLIM2-216ENST00000464275 SMARCC2Q8TAQ2 1214 aa25.62■■□□□ 1.69
PDLIM2-216ENST00000464275 WTIPA6NIX2 430 aaPredicted RBP25.61■■□□□ 1.69
PDLIM2-216ENST00000464275 USP48Q86UV5 1035 aa25.61■■□□□ 1.69
PDLIM2-216ENST00000464275 NBPF3Q9H094 633 aa25.61■■□□□ 1.69
PDLIM2-216ENST00000464275 ARMT1Q9H993 441 aa25.61■■□□□ 1.69
PDLIM2-216ENST00000464275 GYS1P13807 737 aa25.6■■□□□ 1.69
PDLIM2-216ENST00000464275 NASPP49321 788 aaPredicted RBP25.6■■□□□ 1.69
PDLIM2-216ENST00000464275 IFNL3Q8IZI9 196 aa25.6■■□□□ 1.69
PDLIM2-216ENST00000464275 PPP1R9BQ96SB3 815 aa25.6■■□□□ 1.69
PDLIM2-216ENST00000464275 MAST2Q6P0Q8 1798 aa25.6■■□□□ 1.69
PDLIM2-216ENST00000464275 PDS5AQ29RF7 1337 aaKnown RBP25.6■■□□□ 1.69
PDLIM2-216ENST00000464275 JAK2O60674 1132 aa25.6■■□□□ 1.69
PDLIM2-216ENST00000464275 PDIA3P30101 505 aaKnown RBP25.6■■□□□ 1.69
PDLIM2-216ENST00000464275 CNPY2Q9Y2B0 182 aa25.6■■□□□ 1.69
PDLIM2-216ENST00000464275 GRAPQ13588 217 aa25.59■■□□□ 1.69
PDLIM2-216ENST00000464275 CSPP1Q1MSJ5 1256 aa25.59■■□□□ 1.69
PDLIM2-216ENST00000464275 GRAPLQ8TC17 118 aaPredicted RBP25.59■■□□□ 1.69
PDLIM2-216ENST00000464275 NAPBQ9H115 298 aa25.59■■□□□ 1.69
PDLIM2-216ENST00000464275 ZBTB22O15209 634 aa25.58■■□□□ 1.69
PDLIM2-216ENST00000464275 CYP7A1P22680 504 aa25.58■■□□□ 1.69
PDLIM2-216ENST00000464275 ANTXR2P58335 489 aa25.58■■□□□ 1.69
PDLIM2-216ENST00000464275 RBM6P78332 1123 aaKnown RBP25.58■■□□□ 1.69
PDLIM2-216ENST00000464275 HMGN5P82970 282 aaKnown RBP25.58■■□□□ 1.69
PDLIM2-216ENST00000464275 PRR5LQ6MZQ0 368 aa25.58■■□□□ 1.69
PDLIM2-216ENST00000464275 TBC1D10CQ8IV04 446 aa25.58■■□□□ 1.69
PDLIM2-216ENST00000464275 ABCF2Q9UG63 623 aa25.58■■□□□ 1.69
PDLIM2-216ENST00000464275 ZSCAN23Q3MJ62 389 aa25.58■■□□□ 1.69
PDLIM2-216ENST00000464275 ZNF772Q68DY9 489 aaPredicted RBP25.58■■□□□ 1.69
PDLIM2-216ENST00000464275 CDC37L1Q7L3B6 337 aa25.58■■□□□ 1.69
PDLIM2-216ENST00000464275 NSUN7Q8NE18 718 aaKnown RBP25.58■■□□□ 1.69
PDLIM2-216ENST00000464275 NACAP1Q9BZK3 213 aa25.58■■□□□ 1.69
PDLIM2-216ENST00000464275 GDPD2Q9HCC8 539 aa25.58■■□□□ 1.69
PDLIM2-216ENST00000464275 EPB41L4AQ9HCS5 686 aaPredicted RBP25.58■■□□□ 1.69
PDLIM2-216ENST00000464275 RAI14Q9P0K7 980 aa25.58■■□□□ 1.69
PDLIM2-216ENST00000464275 KIAA1551Q9HCM1 1747 aa25.58■■□□□ 1.68
PDLIM2-216ENST00000464275 GSG1L2A8MUP6 293 aa25.57■■□□□ 1.68
PDLIM2-216ENST00000464275 LCORLQ8N3X6 602 aa25.57■■□□□ 1.68
PDLIM2-216ENST00000464275 FAM184AQ8NB25 1140 aa25.57■■□□□ 1.68
PDLIM2-216ENST00000464275 KIF3AQ9Y496 699 aa25.57■■□□□ 1.68
PDLIM2-216ENST00000464275 HIBADHP31937 336 aaKnown RBP25.56■■□□□ 1.68
PDLIM2-216ENST00000464275 NAP1L2Q9ULW6 460 aaPredicted RBP25.56■■□□□ 1.68
PDLIM2-216ENST00000464275 NSFL1CQ9UNZ2 370 aaKnown RBP25.56■■□□□ 1.68
PDLIM2-216ENST00000464275 SLC4A4Q9Y6R1 1079 aa25.56■■□□□ 1.68
PDLIM2-216ENST00000464275 ESPNB1AK53 854 aa25.56■■□□□ 1.68
PDLIM2-216ENST00000464275 CCT2P78371 535 aaKnown RBP25.56■■□□□ 1.68
PDLIM2-216ENST00000464275 ST5P78524 1137 aa25.56■■□□□ 1.68
PDLIM2-216ENST00000464275 TXNRD1Q16881 649 aa25.56■■□□□ 1.68
PDLIM2-216ENST00000464275 CTDNEP1O95476 244 aa25.55■■□□□ 1.68
PDLIM2-216ENST00000464275 SERPINB2P05120 415 aa25.55■■□□□ 1.68
PDLIM2-216ENST00000464275 KLRK1P26718 216 aa25.55■■□□□ 1.68
PDLIM2-216ENST00000464275 DNM1Q05193 864 aaKnown RBP25.55■■□□□ 1.68
PDLIM2-216ENST00000464275 BAZ2AQ9UIF9 1905 aaKnown RBP25.54■■□□□ 1.68
PDLIM2-216ENST00000464275 PTPDC1A2A3K4 754 aa25.54■■□□□ 1.68
PDLIM2-216ENST00000464275 GADD45BO75293 160 aaPredicted RBP25.54■■□□□ 1.68
PDLIM2-216ENST00000464275 DDX11Q96FC9 970 aa25.54■■□□□ 1.68
PDLIM2-216ENST00000464275 GPHNQ9NQX3 736 aaPredicted RBP25.54■■□□□ 1.68
PDLIM2-216ENST00000464275 RBM27Q9P2N5 1060 aaKnown RBP25.54■■□□□ 1.68
PDLIM2-216ENST00000464275 MAGEB6P1A0A0J9YX57 407 aa25.53■■□□□ 1.68
PDLIM2-216ENST00000464275 MIGA1Q8NAN2 632 aa25.53■■□□□ 1.68
PDLIM2-216ENST00000464275 SYAP1Q96A49 352 aaPredicted RBP25.53■■□□□ 1.68
PDLIM2-216ENST00000464275 TMEM63CQ9P1W3 806 aa25.53■■□□□ 1.68
PDLIM2-216ENST00000464275 LEMD3Q9Y2U8 911 aa25.53■■□□□ 1.68
PDLIM2-216ENST00000464275 IRS2Q9Y4H2 1338 aa25.53■■□□□ 1.68
PDLIM2-216ENST00000464275 KLF18A0A0U1RQI7 1052 aa25.53■■□□□ 1.68
PDLIM2-216ENST00000464275 PRKAB2O43741 272 aa25.53■■□□□ 1.68
PDLIM2-216ENST00000464275 TDO2P48775 406 aa25.53■■□□□ 1.68
PDLIM2-216ENST00000464275 RPGRQ92834 1020 aaKnown RBP25.53■■□□□ 1.68
PDLIM2-216ENST00000464275 TMEM87BQ96K49 555 aa25.53■■□□□ 1.68
PDLIM2-216ENST00000464275 NCOA5Q9HCD5 579 aaKnown RBP25.53■■□□□ 1.68
PDLIM2-216ENST00000464275 TFCP2L1Q9NZI6 479 aa25.53■■□□□ 1.68
PDLIM2-216ENST00000464275 SALL1Q9NSC2 1324 aa25.53■■□□□ 1.68
PDLIM2-216ENST00000464275 H3BQV1 296 aa25.52■■□□□ 1.68
PDLIM2-216ENST00000464275 FIBPO43427 364 aa25.52■■□□□ 1.68
PDLIM2-216ENST00000464275 UBE2HP62256 183 aa25.52■■□□□ 1.68
PDLIM2-216ENST00000464275 IFFO2Q5TF58 517 aa25.52■■□□□ 1.68
PDLIM2-216ENST00000464275 CYB5R4Q7L1T6 521 aa25.52■■□□□ 1.68
PDLIM2-216ENST00000464275 ADGRA1Q86SQ6 560 aa25.52■■□□□ 1.68
PDLIM2-216ENST00000464275 PROM2Q8N271 834 aa25.52■■□□□ 1.68
PDLIM2-216ENST00000464275 CNNM2Q9H8M5 875 aa25.52■■□□□ 1.68
PDLIM2-216ENST00000464275 DHX16O60231 1041 aaKnown RBP25.51■■□□□ 1.67
PDLIM2-216ENST00000464275 KRT85P78386 507 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms