RNA–Protein interactions for RNA: ENST00000464025.5

LMO2-204, Transcript of LIM domain only 2, humanhuman

TSL 1 (best)

Gene LMO2, Length 1,550 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO2-204ENST00000464025 SBF2Q86WG5 1849 aa20.53■□□□□ 0.88
LMO2-204ENST00000464025 MAGEB6Q8N7X4 407 aa20.53■□□□□ 0.88
LMO2-204ENST00000464025 HPS5Q9UPZ3 1129 aa20.53■□□□□ 0.88
LMO2-204ENST00000464025 COL4A1P02462 1669 aa20.53■□□□□ 0.88
LMO2-204ENST00000464025 C4AP0C0L4 1744 aa20.52■□□□□ 0.88
LMO2-204ENST00000464025 C4BP0C0L5 1744 aa20.52■□□□□ 0.88
LMO2-204ENST00000464025 CARMIL3Q8ND23 1372 aa20.52■□□□□ 0.88
LMO2-204ENST00000464025 BCAMP50895 628 aa20.52■□□□□ 0.88
LMO2-204ENST00000464025 FAM173BQ6P4H8 233 aa20.52■□□□□ 0.88
LMO2-204ENST00000464025 TMEM87BQ96K49 555 aa20.52■□□□□ 0.88
LMO2-204ENST00000464025 FDPSP14324 419 aaKnown RBP20.51■□□□□ 0.87
LMO2-204ENST00000464025 CLCN1P35523 988 aa20.51■□□□□ 0.87
LMO2-204ENST00000464025 ADD1P35611 737 aaKnown RBP20.51■□□□□ 0.87
LMO2-204ENST00000464025 TBC1D9BQ66K14 1250 aa20.51■□□□□ 0.87
LMO2-204ENST00000464025 TBC1D10CQ8IV04 446 aa20.51■□□□□ 0.87
LMO2-204ENST00000464025 IFNL3Q8IZI9 196 aa20.51■□□□□ 0.87
LMO2-204ENST00000464025 GNL3LQ9NVN8 582 aaKnown RBP20.51■□□□□ 0.87
LMO2-204ENST00000464025 ANGEL1Q9UNK9 670 aaKnown RBP20.51■□□□□ 0.87
LMO2-204ENST00000464025 KLF18A0A0U1RQI7 1052 aa20.51■□□□□ 0.87
LMO2-204ENST00000464025 ESPNB1AK53 854 aa20.51■□□□□ 0.87
LMO2-204ENST00000464025 SNAP23O00161 211 aa20.51■□□□□ 0.87
LMO2-204ENST00000464025 MTA3Q9BTC8 594 aa20.51■□□□□ 0.87
LMO2-204ENST00000464025 NCOA5Q9HCD5 579 aaKnown RBP20.51■□□□□ 0.87
LMO2-204ENST00000464025 RCOR1Q9UKL0 485 aa20.51■□□□□ 0.87
LMO2-204ENST00000464025 APPP05067 770 aa20.5■□□□□ 0.87
LMO2-204ENST00000464025 GPHNQ9NQX3 736 aaPredicted RBP20.5■□□□□ 0.87
LMO2-204ENST00000464025 GSG1L2A8MUP6 293 aa20.49■□□□□ 0.87
LMO2-204ENST00000464025 SH2B2O14492 632 aaPredicted RBP20.49■□□□□ 0.87
LMO2-204ENST00000464025 MBD4O95243 580 aa20.49■□□□□ 0.87
LMO2-204ENST00000464025 C3orf67Q6ZVT6 689 aa20.49■□□□□ 0.87
LMO2-204ENST00000464025 ZNF396Q96N95 335 aaPredicted RBP20.49■□□□□ 0.87
LMO2-204ENST00000464025 SETDB2Q96T68 719 aa20.49■□□□□ 0.87
LMO2-204ENST00000464025 CNNM2Q9H8M5 875 aa20.49■□□□□ 0.87
LMO2-204ENST00000464025 EPB41L4AQ9HCS5 686 aaPredicted RBP20.49■□□□□ 0.87
LMO2-204ENST00000464025 DDX19AQ9NUU7 478 aaKnown RBP20.49■□□□□ 0.87
LMO2-204ENST00000464025 TFIP11Q9UBB9 837 aaKnown RBP20.49■□□□□ 0.87
LMO2-204ENST00000464025 MINPP1Q9UNW1 487 aa20.49■□□□□ 0.87
LMO2-204ENST00000464025 TAF1P21675 1872 aa20.49■□□□□ 0.87
LMO2-204ENST00000464025 PDS5AQ29RF7 1337 aaKnown RBP20.49■□□□□ 0.87
LMO2-204ENST00000464025 GOLGA6L4A6NEF3 574 aa20.48■□□□□ 0.87
LMO2-204ENST00000464025 SEMA3EO15041 775 aa20.48■□□□□ 0.87
LMO2-204ENST00000464025 ONECUT3O60422 494 aaPredicted RBP20.48■□□□□ 0.87
LMO2-204ENST00000464025 RBM43Q6ZSC3 357 aaKnown RBP20.48■□□□□ 0.87
LMO2-204ENST00000464025 SGMS1Q86VZ5 419 aa20.48■□□□□ 0.87
LMO2-204ENST00000464025 NACAP1Q9BZK3 213 aa20.48■□□□□ 0.87
LMO2-204ENST00000464025 NAPBQ9H115 298 aa20.48■□□□□ 0.87
LMO2-204ENST00000464025 GOLGA8BA8MQT2 603 aa20.47■□□□□ 0.87
LMO2-204ENST00000464025 ZPR1O75312 459 aa20.47■□□□□ 0.87
LMO2-204ENST00000464025 LIFRP42702 1097 aa20.47■□□□□ 0.87
LMO2-204ENST00000464025 TMED8Q6PL24 325 aaPredicted RBP20.47■□□□□ 0.87
LMO2-204ENST00000464025 CYB5R4Q7L1T6 521 aa20.47■□□□□ 0.87
LMO2-204ENST00000464025 PTF1AQ7RTS3 328 aa20.47■□□□□ 0.87
LMO2-204ENST00000464025 PGBD1Q96JS3 809 aa20.47■□□□□ 0.87
LMO2-204ENST00000464025 CCNL1Q9UK58 526 aaPredicted RBP20.47■□□□□ 0.87
LMO2-204ENST00000464025 NAP1L2Q9ULW6 460 aaPredicted RBP20.47■□□□□ 0.87
LMO2-204ENST00000464025 RTCBQ9Y3I0 505 aaKnown RBP20.47■□□□□ 0.87
LMO2-204ENST00000464025 CACNA1SQ13698 1873 aa20.47■□□□□ 0.87
LMO2-204ENST00000464025 LIG1P18858 919 aa20.46■□□□□ 0.87
LMO2-204ENST00000464025 TPTE2Q6XPS3 522 aa20.46■□□□□ 0.87
LMO2-204ENST00000464025 IGDCC4Q8TDY8 1250 aa20.46■□□□□ 0.87
LMO2-204ENST00000464025 STAG1Q8WVM7 1258 aa20.46■□□□□ 0.87
LMO2-204ENST00000464025 NLRP3Q96P20 1036 aa20.46■□□□□ 0.87
LMO2-204ENST00000464025 KRT23Q9C075 422 aa20.46■□□□□ 0.87
LMO2-204ENST00000464025 ARMT1Q9H993 441 aa20.46■□□□□ 0.87
LMO2-204ENST00000464025 LRP2BPQ9P2M1 347 aa20.46■□□□□ 0.87
LMO2-204ENST00000464025 DENND2AQ9ULE3 1009 aa20.46■□□□□ 0.87
LMO2-204ENST00000464025 NID2Q14112 1375 aa20.46■□□□□ 0.87
LMO2-204ENST00000464025 GTF2E1P29083 439 aaPredicted RBP20.46■□□□□ 0.87
LMO2-204ENST00000464025 RPS8P62241 208 aaKnown RBP20.46■□□□□ 0.87
LMO2-204ENST00000464025 CAVIN4Q5BKX8 364 aa20.46■□□□□ 0.87
LMO2-204ENST00000464025 AKNAD1Q5T1N1 836 aa20.46■□□□□ 0.87
LMO2-204ENST00000464025 FBXO33Q7Z6M2 555 aa20.46■□□□□ 0.87
LMO2-204ENST00000464025 GJD4Q96KN9 370 aaPredicted RBP20.46■□□□□ 0.87
LMO2-204ENST00000464025 NUP62CLQ9H1M0 184 aa20.46■□□□□ 0.87
LMO2-204ENST00000464025 GNPATO15228 680 aa20.45■□□□□ 0.86
LMO2-204ENST00000464025 IGSF3O75054 1194 aa20.45■□□□□ 0.86
LMO2-204ENST00000464025 CDKL5O76039 1030 aa20.45■□□□□ 0.86
LMO2-204ENST00000464025 RNF214Q8ND24 703 aa20.45■□□□□ 0.86
LMO2-204ENST00000464025 FBXO18Q8NFZ0 1043 aa20.45■□□□□ 0.86
LMO2-204ENST00000464025 CELF1Q92879 486 aaKnown RBP20.45■□□□□ 0.86
LMO2-204ENST00000464025 ANKRD2Q9GZV1 360 aa20.45■□□□□ 0.86
LMO2-204ENST00000464025 MYH13Q9UKX3 1938 aa20.44■□□□□ 0.86
LMO2-204ENST00000464025 B4E1Z4 1266 aa20.44■□□□□ 0.86
LMO2-204ENST00000464025 CPLX1O14810 134 aa20.44■□□□□ 0.86
LMO2-204ENST00000464025 CCDC192P0DO97 292 aa20.44■□□□□ 0.86
LMO2-204ENST00000464025 KCNQ4P56696 695 aa20.44■□□□□ 0.86
LMO2-204ENST00000464025 MAP3K11Q16584 847 aa20.44■□□□□ 0.86
LMO2-204ENST00000464025 GIMAP6Q6P9H5 292 aa20.44■□□□□ 0.86
LMO2-204ENST00000464025 ZSCAN30Q86W11 494 aa20.44■□□□□ 0.86
LMO2-204ENST00000464025 NBPF5PQ86XG9 351 aaPredicted RBP20.44■□□□□ 0.86
LMO2-204ENST00000464025 LCORLQ8N3X6 602 aa20.44■□□□□ 0.86
LMO2-204ENST00000464025 FAM84BQ96KN1 310 aaPredicted RBP20.44■□□□□ 0.86
LMO2-204ENST00000464025 CLSTN2Q9H4D0 955 aa20.44■□□□□ 0.86
LMO2-204ENST00000464025 ORC3Q9UBD5 711 aaPredicted RBP20.44■□□□□ 0.86
LMO2-204ENST00000464025 NEDD4P46934 1319 aa20.44■□□□□ 0.86
LMO2-204ENST00000464025 APOA5Q6Q788 366 aa20.43■□□□□ 0.86
LMO2-204ENST00000464025 BRAPQ7Z569 592 aa20.43■□□□□ 0.86
LMO2-204ENST00000464025 C8orf76Q96K31 380 aa20.43■□□□□ 0.86
LMO2-204ENST00000464025 RNF41Q9H4P4 317 aaPredicted RBP20.43■□□□□ 0.86
LMO2-204ENST00000464025 LY9Q9HBG7 655 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms